EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000004268 (Gene tree)
Gene ID: 110948267
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 16542 bases
Position: chrMVNR01000069.1:437382-453923
Accession: 110948267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000002830	Nucleoplasmin	PF03066.15	1.8e-38	1	1
ENSAPOP00000002844	Nucleoplasmin	PF03066.15	1.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000012763	-	4410	XM_022189717	ENSAPOP00000002844	297 (aa)	XP_022045409	UPI000B8F058A
ENSAPOT00000012781	-	2876	XM_022189718	ENSAPOP00000002830	297 (aa)	XP_022045410	UPI000B8F058A

Gene Model

Click here to download ENSAPOG00000004268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000004268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000004268	npm1b	51	33.117	ENSAPOG00000013083	npm3	76	38.095
ENSAPOG00000004268	npm1b	95	43.771	ENSAPOG00000002813	npm1a	96	44.040

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000004268	npm1b	100	96.980	ENSAOCG00000012549	npm1b	100	96.980	Amphiprion_ocellaris
ENSAPOG00000004268	npm1b	100	93.939	ENSAPEG00000000868	npm1b	100	93.603	Amphiprion_percula
ENSAPOG00000004268	npm1b	100	85.953	ENSATEG00000006254	npm1b	100	86.288	Anabas_testudineus
ENSAPOG00000004268	npm1b	95	43.478	ENSACAG00000015626	-	96	45.455	Anolis_carolinensis
ENSAPOG00000004268	npm1b	98	65.116	ENSAMXG00000042148	npm1b	99	65.781	Astyanax_mexicanus
ENSAPOG00000004268	npm1b	55	39.053	ENSCAFG00000023359	-	65	39.053	Canis_familiaris
ENSAPOG00000004268	npm1b	96	47.138	ENSCPBG00000021221	-	58	48.980	Chrysemys_picta_bellii
ENSAPOG00000004268	npm1b	100	79.333	ENSCSEG00000004530	npm1b	100	79.333	Cynoglossus_semilaevis
ENSAPOG00000004268	npm1b	100	78.930	ENSCVAG00000013016	npm1b	100	77.926	Cyprinodon_variegatus
ENSAPOG00000004268	npm1b	99	66.000	ENSDARG00000037675	npm1b	99	66.000	Danio_rerio
ENSAPOG00000004268	npm1b	99	64.052	ENSELUG00000022123	npm1b	99	64.379	Esox_lucius
ENSAPOG00000004268	npm1b	94	43.706	ENSFALG00000003320	-	94	45.455	Ficedula_albicollis
ENSAPOG00000004268	npm1b	100	78.738	ENSFHEG00000020794	npm1b	100	78.738	Fundulus_heteroclitus
ENSAPOG00000004268	npm1b	98	62.799	ENSGMOG00000002689	npm1b	100	64.527	Gadus_morhua
ENSAPOG00000004268	npm1b	98	44.918	ENSGALG00000002197	-	73	45.902	Gallus_gallus
ENSAPOG00000004268	npm1b	100	79.195	ENSGAFG00000017709	npm1b	100	77.852	Gambusia_affinis
ENSAPOG00000004268	npm1b	98	81.507	ENSGACG00000016706	npm1b	100	81.507	Gasterosteus_aculeatus
ENSAPOG00000004268	npm1b	95	44.407	ENSGAGG00000020250	-	96	45.578	Gopherus_agassizii
ENSAPOG00000004268	npm1b	100	81.271	ENSHBUG00000019903	npm1b	95	84.281	Haplochromis_burtoni
ENSAPOG00000004268	npm1b	100	75.667	ENSHCOG00000003895	npm1b	100	77.000	Hippocampus_comes
ENSAPOG00000004268	npm1b	99	60.458	ENSIPUG00000020165	npm1b	99	61.111	Ictalurus_punctatus
ENSAPOG00000004268	npm1b	99	83.618	ENSKMAG00000008260	npm1b	99	84.694	Kryptolebias_marmoratus
ENSAPOG00000004268	npm1b	98	37.294	ENSLACG00000013460	-	100	37.793	Latimeria_chalumnae
ENSAPOG00000004268	npm1b	94	40.385	ENSLACG00000001779	-	100	42.230	Latimeria_chalumnae
ENSAPOG00000004268	npm1b	93	48.311	ENSLOCG00000001942	npm1b	100	49.495	Lepisosteus_oculatus
ENSAPOG00000004268	npm1b	72	81.735	ENSMAMG00000015335	npm1b	100	81.735	Mastacembelus_armatus
ENSAPOG00000004268	npm1b	93	44.170	ENSMGAG00000001591	-	100	45.230	Meleagris_gallopavo
ENSAPOG00000004268	npm1b	81	83.884	ENSMALG00000015383	npm1b	100	83.471	Monopterus_albus
ENSAPOG00000004268	npm1b	99	78.571	ENSONIG00000001397	npm1b	98	76.792	Oreochromis_niloticus
ENSAPOG00000004268	npm1b	100	64.646	ENSOMEG00000003414	npm1b	100	64.646	Oryzias_melastigma
ENSAPOG00000004268	npm1b	99	58.991	ENSPKIG00000020050	npm1b	99	59.306	Paramormyrops_kingsleyae
ENSAPOG00000004268	npm1b	96	47.635	ENSPSIG00000011204	-	92	47.945	Pelodiscus_sinensis
ENSAPOG00000004268	npm1b	93	37.801	ENSPMAG00000004930	npm1b	99	37.801	Petromyzon_marinus
ENSAPOG00000004268	npm1b	100	78.595	ENSPFOG00000018357	npm1b	100	77.592	Poecilia_formosa
ENSAPOG00000004268	npm1b	98	63.636	ENSPNAG00000005498	npm1b	99	64.310	Pygocentrus_nattereri
ENSAPOG00000004268	npm1b	99	58.249	ENSSFOG00015005064	npm1b	100	58.923	Scleropages_formosus
ENSAPOG00000004268	npm1b	100	83.502	ENSSMAG00000008088	npm1b	100	83.502	Scophthalmus_maximus
ENSAPOG00000004268	npm1b	100	87.248	ENSSDUG00000007726	npm1b	100	86.913	Seriola_dumerili
ENSAPOG00000004268	npm1b	100	87.584	ENSSLDG00000021396	npm1b	100	87.248	Seriola_lalandi_dorsalis
ENSAPOG00000004268	npm1b	100	93.939	ENSSPAG00000011152	npm1b	100	93.939	Stegastes_partitus
ENSAPOG00000004268	npm1b	93	45.455	ENSTGUG00000014970	-	100	45.455	Taeniopygia_guttata
ENSAPOG00000004268	npm1b	100	77.592	ENSTRUG00000008105	npm1b	95	76.254	Takifugu_rubripes
ENSAPOG00000004268	npm1b	99	73.579	ENSTNIG00000013057	npm1b	100	73.579	Tetraodon_nigroviridis
ENSAPOG00000004268	npm1b	98	43.667	ENSXETG00000008403	npm1	95	43.686	Xenopus_tropicalis
ENSAPOG00000004268	npm1b	100	78.930	ENSXMAG00000001986	npm1b	100	77.926	Xiphophorus_maculatus