EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000004287 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 3247 bases
Position: chrMVNR01001616.1:54634-57880
Accession: 110966505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000002776	DNA_pol_A_exo1	PF01612.20	4.3e-10	1	1
ENSAPOP00000002734	DNA_pol_A_exo1	PF01612.20	8.7e-10	1	1
ENSAPOP00000022793	DNA_pol_A_exo1	PF01612.20	8.8e-10	1	1
ENSAPOP00000002744	DNA_pol_A_exo1	PF01612.20	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000012942	-	1311	-	ENSAPOP00000002734	436 (aa)	-	-
ENSAPOT00000012928	-	1377	-	ENSAPOP00000022793	458 (aa)	-	-
ENSAPOT00000012915	-	1476	XM_022215896	ENSAPOP00000002744	491 (aa)	XP_022071588	-
ENSAPOT00000012871	-	885	-	ENSAPOP00000002776	294 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000004287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000004287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000004287	-	68	52.709	ENSG00000178997	EXD1	54	46.290	Homo_sapiens
ENSAPOG00000004287	-	93	62.681	ENSACIG00000008996	-	86	63.551	Amphilophus_citrinellus
ENSAPOG00000004287	-	99	97.561	ENSAOCG00000009355	-	84	97.561	Amphiprion_ocellaris
ENSAPOG00000004287	-	97	88.389	ENSAPEG00000002194	-	100	89.346	Amphiprion_percula
ENSAPOG00000004287	-	88	69.330	ENSATEG00000002623	-	84	70.185	Anabas_testudineus
ENSAPOG00000004287	-	64	48.421	ENSAPLG00000013650	-	94	48.421	Anas_platyrhynchos
ENSAPOG00000004287	-	77	46.725	ENSACAG00000003676	EXD1	68	45.725	Anolis_carolinensis
ENSAPOG00000004287	-	68	54.187	ENSANAG00000029058	EXD1	52	48.708	Aotus_nancymaae
ENSAPOG00000004287	-	92	68.638	ENSACLG00000001361	-	95	60.429	Astatotilapia_calliptera
ENSAPOG00000004287	-	72	70.561	ENSAMXG00000026016	-	88	45.238	Astyanax_mexicanus
ENSAPOG00000004287	-	68	53.695	ENSBTAG00000008363	EXD1	58	47.872	Bos_taurus
ENSAPOG00000004287	-	66	52.821	ENSCJAG00000020765	EXD1	67	38.400	Callithrix_jacchus
ENSAPOG00000004287	-	64	53.684	ENSCAFG00020005504	EXD1	62	47.547	Canis_lupus_dingo
ENSAPOG00000004287	-	76	51.111	ENSCHIG00000019606	EXD1	71	38.287	Capra_hircus
ENSAPOG00000004287	-	68	53.960	ENSCPOG00000010573	EXD1	51	46.643	Cavia_porcellus
ENSAPOG00000004287	-	68	53.202	ENSCATG00000037400	EXD1	52	47.970	Cercocebus_atys
ENSAPOG00000004287	-	64	37.563	ENSCSAG00000007647	EXD1	56	34.375	Chlorocebus_sabaeus
ENSAPOG00000004287	-	65	53.093	ENSCHOG00000011441	EXD1	51	47.909	Choloepus_hoffmanni
ENSAPOG00000004287	-	66	52.821	ENSCANG00000036848	EXD1	69	38.501	Colobus_angolensis_palliatus
ENSAPOG00000004287	-	92	73.171	ENSCSEG00000000904	-	74	73.171	Cynoglossus_semilaevis
ENSAPOG00000004287	-	90	58.868	ENSCVAG00000013735	-	87	60.806	Cyprinodon_variegatus
ENSAPOG00000004287	-	74	55.022	ENSDARG00000098669	exd1	86	51.866	Danio_rerio
ENSAPOG00000004287	-	86	49.805	ENSDORG00000012079	Exd1	66	44.970	Dipodomys_ordii
ENSAPOG00000004287	-	70	41.063	ENSEBUG00000005530	-	76	41.232	Eptatretus_burgeri
ENSAPOG00000004287	-	68	54.187	ENSEASG00005016394	EXD1	70	38.889	Equus_asinus_asinus
ENSAPOG00000004287	-	68	53.695	ENSECAG00000021250	EXD1	51	44.898	Equus_caballus
ENSAPOG00000004287	-	68	45.320	ENSEEUG00000001232	EXD1	56	41.343	Erinaceus_europaeus
ENSAPOG00000004287	-	73	74.771	ENSELUG00000006324	-	87	49.119	Esox_lucius
ENSAPOG00000004287	-	68	53.695	ENSFCAG00000028533	EXD1	53	48.352	Felis_catus
ENSAPOG00000004287	-	72	72.770	ENSFHEG00000013765	-	78	72.770	Fundulus_heteroclitus
ENSAPOG00000004287	-	88	56.634	ENSGMOG00000015956	-	97	59.486	Gadus_morhua
ENSAPOG00000004287	-	83	44.939	ENSGALG00000041449	EXD1	69	45.693	Gallus_gallus
ENSAPOG00000004287	-	92	76.190	ENSGAFG00000017161	-	72	76.190	Gambusia_affinis
ENSAPOG00000004287	-	68	52.709	ENSGGOG00000004594	EXD1	54	46.290	Gorilla_gorilla
ENSAPOG00000004287	-	89	68.608	ENSHBUG00000017880	-	93	69.689	Haplochromis_burtoni
ENSAPOG00000004287	-	65	70.619	ENSIPUG00000003370	-	99	50.000	Ictalurus_punctatus
ENSAPOG00000004287	-	72	84.651	ENSLBEG00000010957	-	69	83.945	Labrus_bergylta
ENSAPOG00000004287	-	98	82.927	ENSLBEG00000000022	-	81	82.927	Labrus_bergylta
ENSAPOG00000004287	-	74	56.164	ENSLACG00000006680	EXD1	51	48.860	Latimeria_chalumnae
ENSAPOG00000004287	-	88	51.258	ENSLOCG00000012278	-	95	48.919	Lepisosteus_oculatus
ENSAPOG00000004287	-	72	52.093	ENSLAFG00000014739	EXD1	53	47.163	Loxodonta_africana
ENSAPOG00000004287	-	68	53.202	ENSMFAG00000034670	EXD1	52	47.970	Macaca_fascicularis
ENSAPOG00000004287	-	68	53.202	ENSMMUG00000013991	EXD1	52	47.970	Macaca_mulatta
ENSAPOG00000004287	-	68	53.202	ENSMNEG00000037333	EXD1	52	47.970	Macaca_nemestrina
ENSAPOG00000004287	-	68	53.202	ENSMLEG00000033153	EXD1	71	51.429	Mandrillus_leucophaeus
ENSAPOG00000004287	-	64	80.000	ENSMAMG00000006592	exd1	65	71.103	Mastacembelus_armatus
ENSAPOG00000004287	-	95	67.246	ENSMZEG00005009193	-	99	59.583	Maylandia_zebra
ENSAPOG00000004287	-	90	39.286	ENSMGAG00000011179	EXD1	66	44.403	Meleagris_gallopavo
ENSAPOG00000004287	-	68	55.665	ENSMICG00000014337	EXD1	58	45.395	Microcebus_murinus
ENSAPOG00000004287	-	68	54.187	ENSMODG00000000164	EXD1	50	49.057	Monodelphis_domestica
ENSAPOG00000004287	-	92	58.204	ENSMALG00000015814	-	98	57.746	Monopterus_albus
ENSAPOG00000004287	-	54	55.280	MGP_PahariEiJ_G0025588	Exd1	69	37.401	Mus_pahari
ENSAPOG00000004287	-	68	55.172	ENSMLUG00000001466	EXD1	53	48.410	Myotis_lucifugus
ENSAPOG00000004287	-	68	83.744	ENSNBRG00000003229	-	74	78.136	Neolamprologus_brichardi
ENSAPOG00000004287	-	68	52.217	ENSNLEG00000003456	EXD1	54	45.583	Nomascus_leucogenys
ENSAPOG00000004287	-	72	83.721	ENSONIG00000012043	-	100	67.287	Oreochromis_niloticus
ENSAPOG00000004287	-	76	51.111	ENSOCUG00000013817	EXD1	55	48.582	Oryctolagus_cuniculus
ENSAPOG00000004287	-	90	58.524	ENSORLG00000026344	-	94	50.895	Oryzias_latipes
ENSAPOG00000004287	-	91	59.309	ENSORLG00020005465	-	94	50.198	Oryzias_latipes_hni
ENSAPOG00000004287	-	76	74.449	ENSORLG00015004848	-	88	59.548	Oryzias_latipes_hsok
ENSAPOG00000004287	-	95	56.391	ENSOMEG00000019812	-	98	50.286	Oryzias_melastigma
ENSAPOG00000004287	-	68	45.588	ENSOGAG00000013095	EXD1	54	43.158	Otolemur_garnettii
ENSAPOG00000004287	-	68	52.709	ENSPPAG00000033760	EXD1	54	45.936	Pan_paniscus
ENSAPOG00000004287	-	68	53.695	ENSPPRG00000011128	EXD1	53	48.352	Panthera_pardus
ENSAPOG00000004287	-	68	53.695	ENSPTIG00000020026	EXD1	55	47.872	Panthera_tigris_altaica
ENSAPOG00000004287	-	68	52.709	ENSPTRG00000006941	EXD1	54	45.936	Pan_troglodytes
ENSAPOG00000004287	-	68	53.202	ENSPANG00000019000	EXD1	52	47.970	Papio_anubis
ENSAPOG00000004287	-	89	49.062	ENSPKIG00000000671	-	76	46.359	Paramormyrops_kingsleyae
ENSAPOG00000004287	-	93	61.981	ENSPMGG00000015466	-	84	58.355	Periophthalmus_magnuspinnatus
ENSAPOG00000004287	-	68	40.394	ENSPMAG00000000920	-	99	40.097	Petromyzon_marinus
ENSAPOG00000004287	-	86	45.956	ENSPCIG00000027845	EXD1	74	45.455	Phascolarctos_cinereus
ENSAPOG00000004287	-	72	79.535	ENSPFOG00000013673	-	80	76.190	Poecilia_formosa
ENSAPOG00000004287	-	92	75.610	ENSPLAG00000014262	-	72	75.610	Poecilia_latipinna
ENSAPOG00000004287	-	92	75.610	ENSPMEG00000012071	-	72	75.610	Poecilia_mexicana
ENSAPOG00000004287	-	92	75.610	ENSPREG00000019468	-	72	75.610	Poecilia_reticulata
ENSAPOG00000004287	-	68	53.202	ENSPPYG00000006369	EXD1	54	46.643	Pongo_abelii
ENSAPOG00000004287	-	68	55.172	ENSPCOG00000026598	EXD1	58	45.066	Propithecus_coquereli
ENSAPOG00000004287	-	68	54.187	ENSPVAG00000003149	EXD1	55	48.227	Pteropus_vampyrus
ENSAPOG00000004287	-	91	56.269	ENSPNAG00000008931	exd1	82	56.608	Pygocentrus_nattereri
ENSAPOG00000004287	-	68	53.465	ENSRBIG00000037257	EXD1	69	51.675	Rhinopithecus_bieti
ENSAPOG00000004287	-	68	54.187	ENSSHAG00000016701	EXD1	56	45.541	Sarcophilus_harrisii
ENSAPOG00000004287	-	92	49.492	ENSSFOG00015016852	-	86	53.191	Scleropages_formosus
ENSAPOG00000004287	-	92	69.784	ENSSMAG00000005451	-	92	65.265	Scophthalmus_maximus
ENSAPOG00000004287	-	90	78.788	ENSSDUG00000004368	exd1	72	78.788	Seriola_dumerili
ENSAPOG00000004287	-	93	71.533	ENSSLDG00000021803	-	91	63.457	Seriola_lalandi_dorsalis
ENSAPOG00000004287	-	71	53.333	ENSSARG00000009556	-	55	47.703	Sorex_araneus
ENSAPOG00000004287	-	87	43.860	ENSSPUG00000001716	EXD1	65	39.945	Sphenodon_punctatus
ENSAPOG00000004287	-	97	68.868	ENSSPAG00000023228	-	98	69.716	Stegastes_partitus
ENSAPOG00000004287	-	76	51.111	ENSSSCG00000004752	EXD1	69	40.682	Sus_scrofa
ENSAPOG00000004287	-	91	48.624	ENSTNIG00000017431	-	97	51.823	Tetraodon_nigroviridis
ENSAPOG00000004287	-	64	42.105	ENSTBEG00000003085	EXD1	61	39.695	Tupaia_belangeri
ENSAPOG00000004287	-	68	53.202	ENSTTRG00000009809	EXD1	54	47.163	Tursiops_truncatus
ENSAPOG00000004287	-	68	53.202	ENSVPAG00000007758	EXD1	54	47.163	Vicugna_pacos
ENSAPOG00000004287	-	68	53.695	ENSVVUG00000026704	EXD1	56	47.018	Vulpes_vulpes
ENSAPOG00000004287	-	69	49.756	ENSXETG00000017895	exd1	97	37.533	Xenopus_tropicalis
ENSAPOG00000004287	-	92	64.444	ENSXCOG00000010879	-	86	68.543	Xiphophorus_couchianus
ENSAPOG00000004287	-	94	64.798	ENSXMAG00000014462	-	90	68.608	Xiphophorus_maculatus