EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000004542 (Gene tree)
Gene ID
110948878
Gene Symbol
SMARCA4
Alias
BAF190|BRG1|FLJ39786|SNF2|SNF2-BETA|SNF2L4|SNF2LB|SWI2|hSNF2b
Full Name
transcription activator BRG1-like
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Minus strand
Length
17590 bases
Position
chrMVNR01000089.1:396866-414455
Accession
110948878
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000002972ResIIIPF04851.151.3e-0811
ENSAPOP00000022946ResIIIPF04851.151.7e-0811
ENSAPOP00000002972BRKPF07533.165.2e-1611
ENSAPOP00000022946BRKPF07533.166.3e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000012532SMARCA4-2024152-ENSAPOP000000029721383 (aa)--
ENSAPOT00000012496SMARCA4-2015170XM_022190623ENSAPOP000000229461623 (aa)XP_022046315-
Gene Model
Click here to download ENSAPOG00000004542's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000004542's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000004542SMARCA49972.943ENSAPOG00000002641SMARCA29772.562
ENSAPOG00000004542SMARCA47889.083ENSAPOG00000003509smarca4a9387.332
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000004542SMARCA49883.313ENSG00000127616SMARCA49995.652Homo_sapiens
ENSAPOG00000004542SMARCA49881.265ENSAMEG00000010868SMARCA49681.412Ailuropoda_melanoleuca
ENSAPOG00000004542SMARCA49984.900ENSACIG00000021550smarca4a9484.606Amphilophus_citrinellus
ENSAPOG00000004542SMARCA49997.403ENSACIG00000003035-9197.403Amphilophus_citrinellus
ENSAPOG00000004542SMARCA49996.366ENSAOCG00000009450-9794.490Amphiprion_ocellaris
ENSAPOG00000004542SMARCA49987.233ENSAOCG00000019167smarca4a9987.242Amphiprion_ocellaris
ENSAPOG00000004542SMARCA49999.446ENSAPEG00000023108-9799.446Amphiprion_percula
ENSAPOG00000004542SMARCA49987.304ENSAPEG00000015559smarca4a9987.313Amphiprion_percula
ENSAPOG00000004542SMARCA49995.502ENSATEG00000001094-9894.436Anabas_testudineus
ENSAPOG00000004542SMARCA49985.004ENSATEG00000011524smarca4a9584.697Anabas_testudineus
ENSAPOG00000004542SMARCA49883.468ENSANAG00000036991SMARCA49581.303Aotus_nancymaae
ENSAPOG00000004542SMARCA49997.041ENSACLG00000008638-9997.041Astatotilapia_calliptera
ENSAPOG00000004542SMARCA49986.132ENSACLG00000000163smarca4a9684.707Astatotilapia_calliptera
ENSAPOG00000004542SMARCA49986.910ENSAMXG00000021023smarca4a9086.155Astyanax_mexicanus
ENSAPOG00000004542SMARCA410091.098ENSAMXG00000011238-10090.237Astyanax_mexicanus
ENSAPOG00000004542SMARCA49883.499ENSBTAG00000019220SMARCA49583.718Bos_taurus
ENSAPOG00000004542SMARCA49588.785ENSCJAG00000005936SMARCA48989.342Callithrix_jacchus
ENSAPOG00000004542SMARCA49883.623ENSCAFG00000017584SMARCA49584.102Canis_familiaris
ENSAPOG00000004542SMARCA49985.581ENSCAFG00020024620SMARCA49682.127Canis_lupus_dingo
ENSAPOG00000004542SMARCA49879.913ENSCHIG00000015318SMARCA49579.938Capra_hircus
ENSAPOG00000004542SMARCA49984.605ENSTSYG00000012966SMARCA49583.727Carlito_syrichta
ENSAPOG00000004542SMARCA49983.273ENSCAPG00000015932SMARCA48989.013Cavia_aperea
ENSAPOG00000004542SMARCA49883.883ENSCPOG00000015549SMARCA49584.112Cavia_porcellus
ENSAPOG00000004542SMARCA49881.281ENSCCAG00000031660SMARCA49381.847Cebus_capucinus
ENSAPOG00000004542SMARCA49883.313ENSCATG00000029530SMARCA49583.978Cercocebus_atys
ENSAPOG00000004542SMARCA49985.216ENSCLAG00000011946SMARCA49583.541Chinchilla_lanigera
ENSAPOG00000004542SMARCA49882.857ENSCPBG00000009994SMARCA49583.313Chrysemys_picta_bellii
ENSAPOG00000004542SMARCA49883.313ENSCANG00000036013SMARCA49583.978Colobus_angolensis_palliatus
ENSAPOG00000004542SMARCA49883.530ENSCGRG00001016732Smarca49583.915Cricetulus_griseus_chok1gshd
ENSAPOG00000004542SMARCA49883.530ENSCGRG00000017242Smarca49583.915Cricetulus_griseus_crigri
ENSAPOG00000004542SMARCA49683.655ENSCSEG00000014771smarca4a9583.760Cynoglossus_semilaevis
ENSAPOG00000004542SMARCA49983.425ENSCVAG00000006979smarca4a9583.708Cyprinodon_variegatus
ENSAPOG00000004542SMARCA49993.781ENSCVAG00000003018-9692.200Cyprinodon_variegatus
ENSAPOG00000004542SMARCA49683.656ENSDARG00000104339SMARCA49583.291Danio_rerio
ENSAPOG00000004542SMARCA49985.218ENSDARG00000077226smarca4a9585.741Danio_rerio
ENSAPOG00000004542SMARCA49883.333ENSDNOG00000048847SMARCA49089.615Dasypus_novemcinctus
ENSAPOG00000004542SMARCA48978.414ENSDORG00000002544Smarca49178.837Dipodomys_ordii
ENSAPOG00000004542SMARCA49773.225ENSETEG00000013361SMARCA49473.367Echinops_telfairi
ENSAPOG00000004542SMARCA49984.297ENSEASG00005006167SMARCA49581.829Equus_asinus_asinus
ENSAPOG00000004542SMARCA49883.468ENSECAG00000008334SMARCA49583.738Equus_caballus
ENSAPOG00000004542SMARCA49987.127ENSELUG00000010247smarca4a9583.863Esox_lucius
ENSAPOG00000004542SMARCA49983.885ENSELUG00000023232-9484.846Esox_lucius
ENSAPOG00000004542SMARCA49883.529ENSFCAG00000004894SMARCA49584.007Felis_catus
ENSAPOG00000004542SMARCA48790.290ENSFALG00000004208SMARCA49381.150Ficedula_albicollis
ENSAPOG00000004542SMARCA49583.441ENSFDAG00000012237SMARCA49783.387Fukomys_damarensis
ENSAPOG00000004542SMARCA49686.476ENSFHEG00000010182smarca4a9686.619Fundulus_heteroclitus
ENSAPOG00000004542SMARCA49995.623ENSFHEG00000007902-9795.623Fundulus_heteroclitus
ENSAPOG00000004542SMARCA49087.071ENSGMOG00000005756-8986.830Gadus_morhua
ENSAPOG00000004542SMARCA48682.898ENSGMOG00000002649smarca4a8884.646Gadus_morhua
ENSAPOG00000004542SMARCA47680.806ENSGALG00000047145SMARCA410081.964Gallus_gallus
ENSAPOG00000004542SMARCA49991.124ENSGAFG00000008827-9485.714Gambusia_affinis
ENSAPOG00000004542SMARCA48888.727ENSGAFG00000014900smarca4a9288.607Gambusia_affinis
ENSAPOG00000004542SMARCA49683.464ENSGACG00000006691smarca4a9583.302Gasterosteus_aculeatus
ENSAPOG00000004542SMARCA49987.934ENSGACG00000016033-9687.936Gasterosteus_aculeatus
ENSAPOG00000004542SMARCA49883.074ENSGAGG00000016757SMARCA49583.531Gopherus_agassizii
ENSAPOG00000004542SMARCA49883.313ENSGGOG00000009882SMARCA49583.978Gorilla_gorilla
ENSAPOG00000004542SMARCA49996.557ENSHBUG00000005447-9796.363Haplochromis_burtoni
ENSAPOG00000004542SMARCA49986.132ENSHBUG00000021172smarca4a9584.903Haplochromis_burtoni
ENSAPOG00000004542SMARCA49883.313ENSHGLG00000010519SMARCA49583.509Heterocephalus_glaber_female
ENSAPOG00000004542SMARCA49883.510ENSHGLG00100013774SMARCA49583.282Heterocephalus_glaber_male
ENSAPOG00000004542SMARCA49984.347ENSHCOG00000009510smarca4a9684.562Hippocampus_comes
ENSAPOG00000004542SMARCA49787.170ENSIPUG00000016346-9384.920Ictalurus_punctatus
ENSAPOG00000004542SMARCA49986.111ENSIPUG00000006107smarca4a9584.793Ictalurus_punctatus
ENSAPOG00000004542SMARCA49883.634ENSSTOG00000007939SMARCA49583.863Ictidomys_tridecemlineatus
ENSAPOG00000004542SMARCA49882.537ENSJJAG00000012877Smarca49582.964Jaculus_jaculus
ENSAPOG00000004542SMARCA49985.503ENSKMAG00000011931smarca4a9583.686Kryptolebias_marmoratus
ENSAPOG00000004542SMARCA49895.551ENSKMAG00000019518-9595.426Kryptolebias_marmoratus
ENSAPOG00000004542SMARCA49984.658ENSLBEG00000017383smarca4a9780.697Labrus_bergylta
ENSAPOG00000004542SMARCA49693.902ENSLBEG00000020655-9492.160Labrus_bergylta
ENSAPOG00000004542SMARCA45678.580ENSLACG00000015309SMARCA410077.778Latimeria_chalumnae
ENSAPOG00000004542SMARCA49983.010ENSLOCG00000007820smarca4a9580.724Lepisosteus_oculatus
ENSAPOG00000004542SMARCA49984.931ENSLAFG00000001433SMARCA49583.883Loxodonta_africana
ENSAPOG00000004542SMARCA49883.313ENSMFAG00000032146SMARCA49483.978Macaca_fascicularis
ENSAPOG00000004542SMARCA49883.313ENSMMUG00000012042SMARCA49090.464Macaca_mulatta
ENSAPOG00000004542SMARCA49883.168ENSMNEG00000028512SMARCA49583.541Macaca_nemestrina
ENSAPOG00000004542SMARCA49882.878ENSMLEG00000034976SMARCA49583.759Mandrillus_leucophaeus
ENSAPOG00000004542SMARCA49997.102ENSMAMG00000002841-9797.102Mastacembelus_armatus
ENSAPOG00000004542SMARCA49985.255ENSMAMG00000009256smarca4a9489.416Mastacembelus_armatus
ENSAPOG00000004542SMARCA49986.132ENSMZEG00005003889smarca4a9584.769Maylandia_zebra
ENSAPOG00000004542SMARCA49996.486ENSMZEG00005023861-9996.486Maylandia_zebra
ENSAPOG00000004542SMARCA49883.602ENSMAUG00000020731Smarca49583.883Mesocricetus_auratus
ENSAPOG00000004542SMARCA49883.344ENSMICG00000009806SMARCA49583.945Microcebus_murinus
ENSAPOG00000004542SMARCA49883.127ENSMOCG00000022209Smarca49583.634Microtus_ochrogaster
ENSAPOG00000004542SMARCA49993.343ENSMMOG00000008466-8893.343Mola_mola
ENSAPOG00000004542SMARCA49982.011ENSMMOG00000007571smarca4a9882.854Mola_mola
ENSAPOG00000004542SMARCA49883.036ENSMODG00000006287SMARCA49583.128Monodelphis_domestica
ENSAPOG00000004542SMARCA49685.580ENSMALG00000003388smarca4a9584.270Monopterus_albus
ENSAPOG00000004542SMARCA410094.004ENSMALG00000021534-10093.831Monopterus_albus
ENSAPOG00000004542SMARCA49883.406MGP_CAROLIEiJ_G0031879Smarca410087.165Mus_caroli
ENSAPOG00000004542SMARCA49883.406ENSMUSG00000032187Smarca49987.165Mus_musculus
ENSAPOG00000004542SMARCA49883.064MGP_PahariEiJ_G0014745Smarca410086.761Mus_pahari
ENSAPOG00000004542SMARCA49883.406MGP_SPRETEiJ_G0033003Smarca410087.165Mus_spretus
ENSAPOG00000004542SMARCA49883.561ENSMPUG00000005711SMARCA49584.040Mustela_putorius_furo
ENSAPOG00000004542SMARCA49883.925ENSMLUG00000004491-9584.102Myotis_lucifugus
ENSAPOG00000004542SMARCA49882.909ENSNGAG00000021852Smarca49583.468Nannospalax_galili
ENSAPOG00000004542SMARCA410096.559ENSNBRG00000018865-10096.559Neolamprologus_brichardi
ENSAPOG00000004542SMARCA49987.384ENSNBRG00000011457smarca4a9087.741Neolamprologus_brichardi
ENSAPOG00000004542SMARCA49980.124ENSNLEG00000012389SMARCA49480.486Nomascus_leucogenys
ENSAPOG00000004542SMARCA48896.552ENSOPRG00000000885-7696.552Ochotona_princeps
ENSAPOG00000004542SMARCA49985.456ENSODEG00000017127SMARCA49581.858Octodon_degus
ENSAPOG00000004542SMARCA49996.424ENSONIG00000018040-9796.424Oreochromis_niloticus
ENSAPOG00000004542SMARCA49986.032ENSONIG00000008196smarca4a9584.635Oreochromis_niloticus
ENSAPOG00000004542SMARCA49980.554ENSOCUG00000001787SMARCA49578.442Oryctolagus_cuniculus
ENSAPOG00000004542SMARCA49683.894ENSORLG00000015452smarca4a9583.656Oryzias_latipes
ENSAPOG00000004542SMARCA49594.041ENSORLG00000003955-9991.020Oryzias_latipes
ENSAPOG00000004542SMARCA49593.981ENSORLG00020009728-9891.385Oryzias_latipes_hni
ENSAPOG00000004542SMARCA49685.426ENSORLG00020004611smarca4a9985.530Oryzias_latipes_hni
ENSAPOG00000004542SMARCA410092.286ENSORLG00015007739-9791.492Oryzias_latipes_hsok
ENSAPOG00000004542SMARCA49683.894ENSORLG00015016560smarca4a9583.531Oryzias_latipes_hsok
ENSAPOG00000004542SMARCA49594.491ENSOMEG00000016626-9594.305Oryzias_melastigma
ENSAPOG00000004542SMARCA49984.308ENSOMEG00000007486smarca4a9584.178Oryzias_melastigma
ENSAPOG00000004542SMARCA49382.058ENSOGAG00000016148SMARCA410082.251Otolemur_garnettii
ENSAPOG00000004542SMARCA49883.043ENSOARG00000017454SMARCA49583.416Ovis_aries
ENSAPOG00000004542SMARCA49883.313ENSPPAG00000043191SMARCA49583.978Pan_paniscus
ENSAPOG00000004542SMARCA49883.529ENSPPRG00000000064SMARCA49584.007Panthera_pardus
ENSAPOG00000004542SMARCA49187.360ENSPTIG00000017447SMARCA49579.497Panthera_tigris_altaica
ENSAPOG00000004542SMARCA49883.313ENSPTRG00000010488SMARCA49583.978Pan_troglodytes
ENSAPOG00000004542SMARCA49883.292ENSPANG00000011042SMARCA49483.666Papio_anubis
ENSAPOG00000004542SMARCA49987.196ENSPKIG00000007770SMARCA49586.116Paramormyrops_kingsleyae
ENSAPOG00000004542SMARCA49686.410ENSPKIG00000010087-8990.015Paramormyrops_kingsleyae
ENSAPOG00000004542SMARCA48387.102ENSPSIG00000005547SMARCA49378.345Pelodiscus_sinensis
ENSAPOG00000004542SMARCA49883.313ENSPEMG00000020389Smarca49583.696Peromyscus_maniculatus_bairdii
ENSAPOG00000004542SMARCA49883.582ENSPCIG00000017138SMARCA49584.030Phascolarctos_cinereus
ENSAPOG00000004542SMARCA49895.175ENSPFOG00000012930-9595.175Poecilia_formosa
ENSAPOG00000004542SMARCA49882.652ENSPFOG00000007892smarca4a9582.857Poecilia_formosa
ENSAPOG00000004542SMARCA49986.354ENSPLAG00000014294smarca4a9583.043Poecilia_latipinna
ENSAPOG00000004542SMARCA49993.702ENSPLAG00000018616-9591.735Poecilia_latipinna
ENSAPOG00000004542SMARCA49882.838ENSPMEG00000003725smarca4a9682.857Poecilia_mexicana
ENSAPOG00000004542SMARCA49995.347ENSPMEG00000008929-9694.612Poecilia_mexicana
ENSAPOG00000004542SMARCA49895.298ENSPREG00000014823-9695.172Poecilia_reticulata
ENSAPOG00000004542SMARCA49982.110ENSPREG00000014608smarca4a9682.566Poecilia_reticulata
ENSAPOG00000004542SMARCA49882.475ENSPPYG00000009568SMARCA49583.026Pongo_abelii
ENSAPOG00000004542SMARCA47890.110ENSPCAG00000014054SMARCA47389.888Procavia_capensis
ENSAPOG00000004542SMARCA49883.821ENSPCOG00000023011SMARCA49583.759Propithecus_coquereli
ENSAPOG00000004542SMARCA47892.149ENSPVAG00000007787SMARCA49075.078Pteropus_vampyrus
ENSAPOG00000004542SMARCA49987.877ENSPNYG00000000717smarca4a9684.760Pundamilia_nyererei
ENSAPOG00000004542SMARCA49997.258ENSPNYG00000023995-9297.258Pundamilia_nyererei
ENSAPOG00000004542SMARCA410090.302ENSPNAG00000006636-9786.338Pygocentrus_nattereri
ENSAPOG00000004542SMARCA49985.897ENSPNAG00000024136smarca4a9481.125Pygocentrus_nattereri
ENSAPOG00000004542SMARCA49883.468ENSRNOG00000009271Smarca49583.853Rattus_norvegicus
ENSAPOG00000004542SMARCA49883.251ENSRBIG00000038696SMARCA49483.915Rhinopithecus_bieti
ENSAPOG00000004542SMARCA49883.313ENSRROG00000045509SMARCA49583.978Rhinopithecus_roxellana
ENSAPOG00000004542SMARCA49883.406ENSSBOG00000026896SMARCA49583.978Saimiri_boliviensis_boliviensis
ENSAPOG00000004542SMARCA49883.499ENSSHAG00000001642SMARCA49583.843Sarcophilus_harrisii
ENSAPOG00000004542SMARCA49988.968ENSSFOG00015013823smarca49585.197Scleropages_formosus
ENSAPOG00000004542SMARCA49684.848ENSSFOG00015009921-8991.342Scleropages_formosus
ENSAPOG00000004542SMARCA49985.374ENSSMAG00000003200smarca4a9583.489Scophthalmus_maximus
ENSAPOG00000004542SMARCA49994.578ENSSMAG00000014082-9894.403Scophthalmus_maximus
ENSAPOG00000004542SMARCA49998.150ENSSDUG00000005388-9998.150Seriola_dumerili
ENSAPOG00000004542SMARCA49981.623ENSSDUG00000017298smarca4a9579.627Seriola_dumerili
ENSAPOG00000004542SMARCA49987.757ENSSLDG00000024486smarca4a9987.163Seriola_lalandi_dorsalis
ENSAPOG00000004542SMARCA49994.483ENSSLDG00000023663-9993.958Seriola_lalandi_dorsalis
ENSAPOG00000004542SMARCA46196.894ENSSARG00000013477SMARCA47796.894Sorex_araneus
ENSAPOG00000004542SMARCA49881.036ENSSPUG00000004558SMARCA49880.685Sphenodon_punctatus
ENSAPOG00000004542SMARCA49998.485ENSSPAG00000012533-9798.155Stegastes_partitus
ENSAPOG00000004542SMARCA49986.975ENSSPAG00000004248smarca4a9584.279Stegastes_partitus
ENSAPOG00000004542SMARCA49883.467ENSSSCG00000013629SMARCA49584.070Sus_scrofa
ENSAPOG00000004542SMARCA46084.179ENSTGUG00000015488-9984.570Taeniopygia_guttata
ENSAPOG00000004542SMARCA49992.170ENSTRUG00000001378SMARCA49992.170Takifugu_rubripes
ENSAPOG00000004542SMARCA49982.584ENSTRUG00000004885smarca4a9982.630Takifugu_rubripes
ENSAPOG00000004542SMARCA47883.265ENSTNIG00000004859-9686.272Tetraodon_nigroviridis
ENSAPOG00000004542SMARCA49989.516ENSTNIG00000004536SMARCA49590.750Tetraodon_nigroviridis
ENSAPOG00000004542SMARCA45298.649ENSTBEG00000000707-5298.571Tupaia_belangeri
ENSAPOG00000004542SMARCA49881.595ENSTTRG00000009519SMARCA49581.857Tursiops_truncatus
ENSAPOG00000004542SMARCA49883.623ENSUAMG00000014661SMARCA49584.102Ursus_americanus
ENSAPOG00000004542SMARCA410085.561ENSUMAG00000022005SMARCA49590.242Ursus_maritimus
ENSAPOG00000004542SMARCA49983.623ENSVVUG00000017820SMARCA49284.102Vulpes_vulpes
ENSAPOG00000004542SMARCA49981.391ENSXETG00000009355smarca49979.921Xenopus_tropicalis
ENSAPOG00000004542SMARCA49994.092ENSXCOG00000013494-8894.092Xiphophorus_couchianus
ENSAPOG00000004542SMARCA49995.887ENSXMAG00000007030-9594.796Xiphophorus_maculatus
ENSAPOG00000004542SMARCA49882.287ENSXMAG00000006321smarca4a9985.064Xiphophorus_maculatus

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