EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000004714 (Gene tree)
Gene ID: 110970115
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 3140 bases
Position: chrMVNR01002603.1:17851-20990
Accession: 110970115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000023103	GTP_EFTU	PF00009.27	1.3e-48	1	1
ENSAPOP00000023103	GTP_EFTU_D2	PF03144.25	1.1e-14	1	1
ENSAPOP00000023103	GTP_EFTU_D3	PF03143.17	2.7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000012093	-	1356	XM_022220332	ENSAPOP00000023103	451 (aa)	XP_022076024	-

Gene Model

Click here to download ENSAPOG00000004714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000004714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000004714	-	83	39.433	ENSAPOG00000013169	hbs1l	63	39.433
ENSAPOG00000004714	-	97	68.009	ENSAPOG00000016459	si:dkey-37o8.1	98	68.009
ENSAPOG00000004714	-	96	38.149	ENSAPOG00000002524	gspt1l	74	38.149
ENSAPOG00000004714	-	96	86.036	ENSAPOG00000001301	EEF1A1	99	86.036
ENSAPOG00000004714	-	100	85.498	ENSAPOG00000001743	eef1a1b	98	86.937
ENSAPOG00000004714	-	68	86.364	ENSAPOG00000004757	eef1a1l1	88	98.276
ENSAPOG00000004714	-	96	37.387	ENSAPOG00000004594	-	84	36.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000004714	-	89	92.010	ENSACIG00000001219	-	97	92.060	Amphilophus_citrinellus
ENSAPOG00000004714	-	89	94.915	ENSAOCG00000022002	-	100	94.915	Amphiprion_ocellaris
ENSAPOG00000004714	-	100	89.805	ENSAOCG00000022039	-	98	90.244	Amphiprion_ocellaris
ENSAPOG00000004714	-	100	90.456	ENSAPEG00000016361	-	98	90.909	Amphiprion_percula
ENSAPOG00000004714	-	98	93.126	ENSATEG00000003244	-	95	93.126	Anabas_testudineus
ENSAPOG00000004714	-	100	92.408	ENSACLG00000022560	-	98	92.461	Astatotilapia_calliptera
ENSAPOG00000004714	-	100	80.303	WBGene00001169	eef-1A.2	98	80.752	Caenorhabditis_elegans
ENSAPOG00000004714	-	100	80.303	WBGene00001168	eef-1A.1	98	80.752	Caenorhabditis_elegans
ENSAPOG00000004714	-	100	75.751	ENSCING00000007703	-	97	75.877	Ciona_intestinalis
ENSAPOG00000004714	-	98	78.462	ENSCING00000005126	-	98	78.462	Ciona_intestinalis
ENSAPOG00000004714	-	99	81.878	ENSCING00000021478	-	98	82.405	Ciona_intestinalis
ENSAPOG00000004714	-	98	78.414	ENSCING00000018894	-	97	78.414	Ciona_intestinalis
ENSAPOG00000004714	-	99	81.400	ENSCSAVG00000006357	-	96	87.333	Ciona_savignyi
ENSAPOG00000004714	-	98	79.560	ENSCSAVG00000009663	-	98	79.560	Ciona_savignyi
ENSAPOG00000004714	-	98	77.778	ENSCSAVG00000003196	-	98	77.778	Ciona_savignyi
ENSAPOG00000004714	-	99	74.292	ENSCSAVG00000001085	-	89	75.336	Ciona_savignyi
ENSAPOG00000004714	-	98	92.018	ENSCSEG00000008011	-	98	92.018	Cynoglossus_semilaevis
ENSAPOG00000004714	-	89	82.524	ENSCSEG00000007992	-	97	82.630	Cynoglossus_semilaevis
ENSAPOG00000004714	-	89	82.609	ENSCSEG00000007972	-	98	82.921	Cynoglossus_semilaevis
ENSAPOG00000004714	-	100	94.360	ENSCVAG00000019356	-	100	94.360	Cyprinodon_variegatus
ENSAPOG00000004714	-	98	83.407	FBgn0000557	eEF1alpha2	98	83.407	Drosophila_melanogaster
ENSAPOG00000004714	-	100	83.766	FBgn0284245	eEF1alpha1	97	84.152	Drosophila_melanogaster
ENSAPOG00000004714	-	99	79.783	ENSEBUG00000015814	-	98	80.266	Eptatretus_burgeri
ENSAPOG00000004714	-	100	94.577	ENSFHEG00000015054	-	100	94.577	Fundulus_heteroclitus
ENSAPOG00000004714	-	98	93.348	ENSGAFG00000014646	-	98	93.348	Gambusia_affinis
ENSAPOG00000004714	-	98	93.792	ENSGACG00000002182	-	98	93.792	Gasterosteus_aculeatus
ENSAPOG00000004714	-	100	90.456	ENSGACG00000002143	-	98	90.687	Gasterosteus_aculeatus
ENSAPOG00000004714	-	56	92.063	ENSHBUG00000017166	-	91	92.149	Haplochromis_burtoni
ENSAPOG00000004714	-	98	92.905	ENSHCOG00000008468	-	98	92.905	Hippocampus_comes
ENSAPOG00000004714	-	99	82.213	ENSHCOG00000008489	-	96	83.258	Hippocampus_comes
ENSAPOG00000004714	-	99	82.609	ENSLBEG00000002955	-	98	82.705	Labrus_bergylta
ENSAPOG00000004714	-	98	92.239	ENSLBEG00000002759	-	98	92.239	Labrus_bergylta
ENSAPOG00000004714	-	100	94.577	ENSMAMG00000007715	-	100	94.577	Mastacembelus_armatus
ENSAPOG00000004714	-	98	91.353	ENSMMOG00000001165	-	98	91.353	Mola_mola
ENSAPOG00000004714	-	99	73.799	ENSMMOG00000018160	-	95	78.261	Mola_mola
ENSAPOG00000004714	-	99	84.130	ENSMMOG00000001106	-	98	84.479	Mola_mola
ENSAPOG00000004714	-	100	84.989	ENSNBRG00000017346	-	97	84.876	Neolamprologus_brichardi
ENSAPOG00000004714	-	76	89.205	ENSONIG00000017760	-	98	89.205	Oreochromis_niloticus
ENSAPOG00000004714	-	100	94.794	ENSORLG00000007614	eef1a	100	94.794	Oryzias_latipes
ENSAPOG00000004714	-	100	95.011	ENSORLG00015002397	-	100	95.011	Oryzias_latipes_hsok
ENSAPOG00000004714	-	100	94.794	ENSOMEG00000018226	-	100	94.794	Oryzias_melastigma
ENSAPOG00000004714	-	94	47.836	ENSPMGG00000022427	-	96	52.500	Periophthalmus_magnuspinnatus
ENSAPOG00000004714	-	98	91.814	ENSPMGG00000023911	-	99	92.000	Periophthalmus_magnuspinnatus
ENSAPOG00000004714	-	98	93.348	ENSPFOG00000003924	-	98	92.556	Poecilia_formosa
ENSAPOG00000004714	-	98	93.348	ENSPLAG00000004316	-	98	93.348	Poecilia_latipinna
ENSAPOG00000004714	-	98	93.570	ENSPMEG00000001010	-	98	93.570	Poecilia_mexicana
ENSAPOG00000004714	-	100	91.775	ENSPREG00000008243	-	98	93.126	Poecilia_reticulata
ENSAPOG00000004714	-	100	92.408	ENSPNYG00000007263	-	98	92.461	Pundamilia_nyererei
ENSAPOG00000004714	-	96	78.202	YBR118W	TEF2	98	77.605	Saccharomyces_cerevisiae
ENSAPOG00000004714	-	96	78.202	YPR080W	TEF1	98	77.605	Saccharomyces_cerevisiae
ENSAPOG00000004714	-	54	93.443	ENSSMAG00000016277	-	96	93.443	Scophthalmus_maximus
ENSAPOG00000004714	-	98	81.607	ENSSMAG00000018469	-	98	81.607	Scophthalmus_maximus
ENSAPOG00000004714	-	98	93.792	ENSSDUG00000008198	-	98	93.792	Seriola_dumerili
ENSAPOG00000004714	-	98	91.353	ENSSPAG00000001710	-	98	91.353	Stegastes_partitus
ENSAPOG00000004714	-	98	93.126	ENSTRUG00000005727	ef-1a	98	93.126	Takifugu_rubripes
ENSAPOG00000004714	-	99	84.130	ENSTRUG00000005066	-	98	84.479	Takifugu_rubripes
ENSAPOG00000004714	-	99	80.435	ENSTNIG00000002617	-	94	82.000	Tetraodon_nigroviridis
ENSAPOG00000004714	-	98	93.792	ENSTNIG00000002619	-	98	93.792	Tetraodon_nigroviridis
ENSAPOG00000004714	-	98	93.348	ENSXCOG00000001542	-	99	93.274	Xiphophorus_couchianus