EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000004921 (Gene tree)
Gene ID: 110960562
Gene Symbol: cpsf4
Alias: nar|no arches
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 4110 bases
Position: chrMVNR01000807.1:53-4162
Accession: 110960562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000003393	zf-CCCH	PF00642.24	7.8e-08	1	1
ENSAPOP00000003393	zf-CCHC	PF00098.23	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000011830	-	501	XM_022207836	ENSAPOP00000003393	166 (aa)	XP_022063528	-

Gene Model

Click here to download ENSAPOG00000004921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000004921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000004921	cpsf4	100	74.176	ENSG00000160917	CPSF4	69	81.818	Homo_sapiens
ENSAPOG00000004921	cpsf4	100	74.725	ENSAMEG00000006252	CPSF4	67	74.725	Ailuropoda_melanoleuca
ENSAPOG00000004921	cpsf4	100	74.011	ENSACIG00000009248	cpsf4	63	74.011	Amphilophus_citrinellus
ENSAPOG00000004921	cpsf4	100	90.960	ENSAOCG00000019616	cpsf4	67	90.960	Amphiprion_ocellaris
ENSAPOG00000004921	cpsf4	100	90.960	ENSAPEG00000011679	cpsf4	67	90.960	Amphiprion_percula
ENSAPOG00000004921	cpsf4	100	87.709	ENSATEG00000007010	cpsf4	67	87.709	Anabas_testudineus
ENSAPOG00000004921	cpsf4	100	73.077	ENSACAG00000012941	CPSF4	60	73.077	Anolis_carolinensis
ENSAPOG00000004921	cpsf4	100	74.176	ENSANAG00000021360	CPSF4	67	74.176	Aotus_nancymaae
ENSAPOG00000004921	cpsf4	100	86.441	ENSACLG00000010374	cpsf4	67	86.441	Astatotilapia_calliptera
ENSAPOG00000004921	cpsf4	100	74.176	ENSAMXG00000031647	cpsf4	67	74.176	Astyanax_mexicanus
ENSAPOG00000004921	cpsf4	100	69.492	ENSBTAG00000002090	CPSF4	64	69.492	Bos_taurus
ENSAPOG00000004921	cpsf4	100	74.176	ENSCJAG00000015826	CPSF4	67	74.176	Callithrix_jacchus
ENSAPOG00000004921	cpsf4	100	74.725	ENSCAFG00000015036	CPSF4	67	74.725	Canis_familiaris
ENSAPOG00000004921	cpsf4	100	74.725	ENSCAFG00020014462	CPSF4	69	74.725	Canis_lupus_dingo
ENSAPOG00000004921	cpsf4	100	74.176	ENSCHIG00000014313	CPSF4	67	74.176	Capra_hircus
ENSAPOG00000004921	cpsf4	100	62.360	ENSTSYG00000014604	-	64	62.360	Carlito_syrichta
ENSAPOG00000004921	cpsf4	100	68.927	ENSTSYG00000005712	-	64	68.927	Carlito_syrichta
ENSAPOG00000004921	cpsf4	100	65.169	ENSTSYG00000008195	-	69	65.169	Carlito_syrichta
ENSAPOG00000004921	cpsf4	100	74.725	ENSCAPG00000013881	CPSF4	72	74.725	Cavia_aperea
ENSAPOG00000004921	cpsf4	100	68.927	ENSCPOG00000001783	CPSF4	64	68.927	Cavia_porcellus
ENSAPOG00000004921	cpsf4	100	74.176	ENSCCAG00000028291	CPSF4	67	74.176	Cebus_capucinus
ENSAPOG00000004921	cpsf4	100	74.176	ENSCATG00000038440	CPSF4	67	74.176	Cercocebus_atys
ENSAPOG00000004921	cpsf4	100	74.176	ENSCLAG00000007050	CPSF4	67	74.176	Chinchilla_lanigera
ENSAPOG00000004921	cpsf4	100	74.176	ENSCSAG00000017795	CPSF4	67	74.176	Chlorocebus_sabaeus
ENSAPOG00000004921	cpsf4	100	73.626	ENSCPBG00000020869	CPSF4	84	73.626	Chrysemys_picta_bellii
ENSAPOG00000004921	cpsf4	95	41.667	ENSCING00000021080	-	63	41.667	Ciona_intestinalis
ENSAPOG00000004921	cpsf4	94	41.026	ENSCSAVG00000011469	-	67	41.026	Ciona_savignyi
ENSAPOG00000004921	cpsf4	100	74.176	ENSCANG00000019384	CPSF4	67	74.176	Colobus_angolensis_palliatus
ENSAPOG00000004921	cpsf4	100	68.927	ENSCGRG00001024184	Cpsf4	64	68.927	Cricetulus_griseus_chok1gshd
ENSAPOG00000004921	cpsf4	100	74.725	ENSCGRG00000013892	Cpsf4	67	74.725	Cricetulus_griseus_crigri
ENSAPOG00000004921	cpsf4	100	83.616	ENSCSEG00000019055	cpsf4	67	83.616	Cynoglossus_semilaevis
ENSAPOG00000004921	cpsf4	100	81.356	ENSCVAG00000016528	cpsf4	67	81.356	Cyprinodon_variegatus
ENSAPOG00000004921	cpsf4	100	73.770	ENSDARG00000020217	cpsf4	68	73.770	Danio_rerio
ENSAPOG00000004921	cpsf4	100	74.725	ENSDNOG00000006344	CPSF4	67	74.725	Dasypus_novemcinctus
ENSAPOG00000004921	cpsf4	100	74.176	ENSDORG00000000742	Cpsf4	83	74.176	Dipodomys_ordii
ENSAPOG00000004921	cpsf4	100	45.455	FBgn0015621	Clp	68	45.755	Drosophila_melanogaster
ENSAPOG00000004921	cpsf4	99	53.107	ENSEBUG00000012552	cpsf4	62	53.107	Eptatretus_burgeri
ENSAPOG00000004921	cpsf4	100	68.927	ENSEASG00005002487	CPSF4	64	68.927	Equus_asinus_asinus
ENSAPOG00000004921	cpsf4	100	74.725	ENSECAG00000007525	CPSF4	67	74.725	Equus_caballus
ENSAPOG00000004921	cpsf4	100	76.087	ENSELUG00000011481	cpsf4	68	76.087	Esox_lucius
ENSAPOG00000004921	cpsf4	100	74.725	ENSFCAG00000015070	CPSF4	67	74.725	Felis_catus
ENSAPOG00000004921	cpsf4	100	68.362	ENSFALG00000013799	CPSF4	64	68.362	Ficedula_albicollis
ENSAPOG00000004921	cpsf4	100	74.725	ENSFDAG00000014092	CPSF4	74	74.725	Fukomys_damarensis
ENSAPOG00000004921	cpsf4	100	83.616	ENSFHEG00000010880	cpsf4	67	83.616	Fundulus_heteroclitus
ENSAPOG00000004921	cpsf4	100	71.271	ENSGMOG00000002330	cpsf4	65	71.271	Gadus_morhua
ENSAPOG00000004921	cpsf4	89	34.356	ENSGALG00000004441	-	82	34.356	Gallus_gallus
ENSAPOG00000004921	cpsf4	100	67.232	ENSGALG00000004714	CPSF4	64	67.232	Gallus_gallus
ENSAPOG00000004921	cpsf4	100	81.356	ENSGAFG00000010580	cpsf4	67	81.356	Gambusia_affinis
ENSAPOG00000004921	cpsf4	100	79.213	ENSGACG00000007792	cpsf4	65	79.213	Gasterosteus_aculeatus
ENSAPOG00000004921	cpsf4	100	73.626	ENSGAGG00000021835	CPSF4	67	73.626	Gopherus_agassizii
ENSAPOG00000004921	cpsf4	50	63.830	ENSGAGG00000020579	-	51	63.830	Gopherus_agassizii
ENSAPOG00000004921	cpsf4	100	74.176	ENSGGOG00000015131	CPSF4	67	74.176	Gorilla_gorilla
ENSAPOG00000004921	cpsf4	100	86.441	ENSHBUG00000013699	cpsf4	67	86.441	Haplochromis_burtoni
ENSAPOG00000004921	cpsf4	100	73.770	ENSHGLG00000017150	CPSF4	68	73.770	Heterocephalus_glaber_female
ENSAPOG00000004921	cpsf4	100	73.770	ENSHGLG00100009215	-	79	73.770	Heterocephalus_glaber_male
ENSAPOG00000004921	cpsf4	100	78.652	ENSHCOG00000004397	cpsf4	67	78.652	Hippocampus_comes
ENSAPOG00000004921	cpsf4	100	72.678	ENSIPUG00000017147	cpsf4	68	74.317	Ictalurus_punctatus
ENSAPOG00000004921	cpsf4	100	74.725	ENSSTOG00000001688	CPSF4	67	74.725	Ictidomys_tridecemlineatus
ENSAPOG00000004921	cpsf4	100	74.176	ENSJJAG00000019426	Cpsf4	67	74.176	Jaculus_jaculus
ENSAPOG00000004921	cpsf4	100	85.311	ENSKMAG00000015642	cpsf4	67	85.311	Kryptolebias_marmoratus
ENSAPOG00000004921	cpsf4	100	47.486	ENSLACG00000018470	-	64	47.486	Latimeria_chalumnae
ENSAPOG00000004921	cpsf4	100	74.317	ENSLACG00000010938	CPSF4	67	74.317	Latimeria_chalumnae
ENSAPOG00000004921	cpsf4	100	69.780	ENSLOCG00000004814	cpsf4	67	71.271	Lepisosteus_oculatus
ENSAPOG00000004921	cpsf4	100	75.275	ENSLAFG00000000159	CPSF4	67	75.275	Loxodonta_africana
ENSAPOG00000004921	cpsf4	100	74.176	ENSMFAG00000001462	CPSF4	82	68.362	Macaca_fascicularis
ENSAPOG00000004921	cpsf4	100	74.176	ENSMMUG00000019191	CPSF4	67	74.176	Macaca_mulatta
ENSAPOG00000004921	cpsf4	100	74.176	ENSMNEG00000032306	CPSF4	67	74.176	Macaca_nemestrina
ENSAPOG00000004921	cpsf4	100	74.176	ENSMLEG00000034721	CPSF4	67	74.176	Mandrillus_leucophaeus
ENSAPOG00000004921	cpsf4	100	85.393	ENSMAMG00000006244	cpsf4	67	85.393	Mastacembelus_armatus
ENSAPOG00000004921	cpsf4	100	86.441	ENSMZEG00005007515	cpsf4	67	86.441	Maylandia_zebra
ENSAPOG00000004921	cpsf4	100	67.232	ENSMGAG00000004235	CPSF4	74	67.232	Meleagris_gallopavo
ENSAPOG00000004921	cpsf4	100	74.725	ENSMAUG00000021253	Cpsf4	67	74.725	Mesocricetus_auratus
ENSAPOG00000004921	cpsf4	100	74.176	ENSMICG00000017429	CPSF4	67	74.176	Microcebus_murinus
ENSAPOG00000004921	cpsf4	100	74.725	ENSMOCG00000014901	Cpsf4	67	74.725	Microtus_ochrogaster
ENSAPOG00000004921	cpsf4	100	85.955	ENSMMOG00000001813	cpsf4	67	85.955	Mola_mola
ENSAPOG00000004921	cpsf4	100	75.275	ENSMODG00000001367	CPSF4	67	75.275	Monodelphis_domestica
ENSAPOG00000004921	cpsf4	100	84.270	ENSMALG00000012611	cpsf4	71	84.270	Monopterus_albus
ENSAPOG00000004921	cpsf4	100	74.725	MGP_CAROLIEiJ_G0028012	Cpsf4	67	74.725	Mus_caroli
ENSAPOG00000004921	cpsf4	100	74.725	ENSMUSG00000029625	Cpsf4	67	74.725	Mus_musculus
ENSAPOG00000004921	cpsf4	100	74.725	MGP_PahariEiJ_G0024581	Cpsf4	67	74.725	Mus_pahari
ENSAPOG00000004921	cpsf4	100	74.176	MGP_SPRETEiJ_G0029013	Cpsf4	67	74.176	Mus_spretus
ENSAPOG00000004921	cpsf4	100	74.725	ENSMPUG00000016508	CPSF4	67	74.725	Mustela_putorius_furo
ENSAPOG00000004921	cpsf4	100	69.492	ENSMLUG00000010980	CPSF4	74	69.492	Myotis_lucifugus
ENSAPOG00000004921	cpsf4	100	74.725	ENSNGAG00000001567	Cpsf4	67	74.725	Nannospalax_galili
ENSAPOG00000004921	cpsf4	100	86.441	ENSNBRG00000003943	cpsf4	72	86.441	Neolamprologus_brichardi
ENSAPOG00000004921	cpsf4	100	71.111	ENSNLEG00000011074	CPSF4	66	71.111	Nomascus_leucogenys
ENSAPOG00000004921	cpsf4	100	75.275	ENSMEUG00000006955	CPSF4	67	75.275	Notamacropus_eugenii
ENSAPOG00000004921	cpsf4	100	74.176	ENSOPRG00000013663	CPSF4	67	74.176	Ochotona_princeps
ENSAPOG00000004921	cpsf4	100	74.725	ENSODEG00000011181	-	67	74.725	Octodon_degus
ENSAPOG00000004921	cpsf4	100	65.363	ENSODEG00000009779	-	71	65.363	Octodon_degus
ENSAPOG00000004921	cpsf4	98	59.538	ENSODEG00000018283	-	60	59.538	Octodon_degus
ENSAPOG00000004921	cpsf4	100	86.441	ENSONIG00000008495	cpsf4	67	86.441	Oreochromis_niloticus
ENSAPOG00000004921	cpsf4	100	42.708	ENSOANG00000009568	-	69	42.708	Ornithorhynchus_anatinus
ENSAPOG00000004921	cpsf4	100	74.586	ENSOANG00000007729	CPSF4	77	74.586	Ornithorhynchus_anatinus
ENSAPOG00000004921	cpsf4	100	84.746	ENSORLG00000022798	cpsf4	67	84.746	Oryzias_latipes
ENSAPOG00000004921	cpsf4	100	84.746	ENSORLG00020008548	cpsf4	67	84.746	Oryzias_latipes_hni
ENSAPOG00000004921	cpsf4	100	84.746	ENSORLG00015019575	cpsf4	67	84.746	Oryzias_latipes_hsok
ENSAPOG00000004921	cpsf4	100	83.051	ENSOMEG00000005176	cpsf4	67	83.051	Oryzias_melastigma
ENSAPOG00000004921	cpsf4	100	74.176	ENSOGAG00000010884	CPSF4	67	74.176	Otolemur_garnettii
ENSAPOG00000004921	cpsf4	100	62.366	ENSOARG00000018668	CPSF4	68	62.366	Ovis_aries
ENSAPOG00000004921	cpsf4	100	74.176	ENSPPAG00000043355	CPSF4	67	74.176	Pan_paniscus
ENSAPOG00000004921	cpsf4	100	74.725	ENSPPRG00000003134	CPSF4	67	74.725	Panthera_pardus
ENSAPOG00000004921	cpsf4	100	74.176	ENSPTIG00000005604	CPSF4	67	74.176	Panthera_tigris_altaica
ENSAPOG00000004921	cpsf4	100	74.176	ENSPTRG00000019453	CPSF4	67	74.176	Pan_troglodytes
ENSAPOG00000004921	cpsf4	100	74.176	ENSPANG00000023123	CPSF4	67	74.176	Papio_anubis
ENSAPOG00000004921	cpsf4	100	71.505	ENSPKIG00000014278	cpsf4	68	71.505	Paramormyrops_kingsleyae
ENSAPOG00000004921	cpsf4	100	73.077	ENSPSIG00000011229	CPSF4	84	73.077	Pelodiscus_sinensis
ENSAPOG00000004921	cpsf4	100	48.023	ENSPSIG00000018198	-	81	48.023	Pelodiscus_sinensis
ENSAPOG00000004921	cpsf4	100	71.751	ENSPMGG00000017735	cpsf4	65	71.751	Periophthalmus_magnuspinnatus
ENSAPOG00000004921	cpsf4	100	74.725	ENSPEMG00000004508	Cpsf4	67	74.725	Peromyscus_maniculatus_bairdii
ENSAPOG00000004921	cpsf4	100	75.275	ENSPCIG00000024776	CPSF4	67	75.275	Phascolarctos_cinereus
ENSAPOG00000004921	cpsf4	100	81.356	ENSPFOG00000014912	cpsf4	67	81.356	Poecilia_formosa
ENSAPOG00000004921	cpsf4	100	70.056	ENSPLAG00000009599	cpsf4	64	70.056	Poecilia_latipinna
ENSAPOG00000004921	cpsf4	100	81.356	ENSPMEG00000009790	cpsf4	67	81.356	Poecilia_mexicana
ENSAPOG00000004921	cpsf4	100	80.791	ENSPREG00000018166	cpsf4	66	80.791	Poecilia_reticulata
ENSAPOG00000004921	cpsf4	100	74.176	ENSPPYG00000017378	CPSF4	78	74.176	Pongo_abelii
ENSAPOG00000004921	cpsf4	100	75.275	ENSPCAG00000001892	CPSF4	67	75.275	Procavia_capensis
ENSAPOG00000004921	cpsf4	100	74.725	ENSPCOG00000012771	CPSF4	70	74.725	Propithecus_coquereli
ENSAPOG00000004921	cpsf4	100	74.725	ENSPVAG00000007531	CPSF4	67	74.725	Pteropus_vampyrus
ENSAPOG00000004921	cpsf4	100	86.441	ENSPNYG00000018559	cpsf4	67	86.441	Pundamilia_nyererei
ENSAPOG00000004921	cpsf4	100	75.824	ENSPNAG00000003736	cpsf4	67	75.824	Pygocentrus_nattereri
ENSAPOG00000004921	cpsf4	100	70.056	ENSRNOG00000000985	Cpsf4	64	70.056	Rattus_norvegicus
ENSAPOG00000004921	cpsf4	100	74.176	ENSRBIG00000033886	CPSF4	77	74.176	Rhinopithecus_bieti
ENSAPOG00000004921	cpsf4	100	68.362	ENSRROG00000040431	CPSF4	64	68.362	Rhinopithecus_roxellana
ENSAPOG00000004921	cpsf4	100	74.176	ENSSBOG00000020493	CPSF4	82	68.362	Saimiri_boliviensis_boliviensis
ENSAPOG00000004921	cpsf4	100	75.275	ENSSHAG00000011533	CPSF4	67	75.275	Sarcophilus_harrisii
ENSAPOG00000004921	cpsf4	100	70.745	ENSSFOG00015007883	cpsf4	68	70.745	Scleropages_formosus
ENSAPOG00000004921	cpsf4	100	71.910	ENSSMAG00000006374	cpsf4	64	71.910	Scophthalmus_maximus
ENSAPOG00000004921	cpsf4	100	88.764	ENSSDUG00000018887	cpsf4	67	88.764	Seriola_dumerili
ENSAPOG00000004921	cpsf4	100	88.764	ENSSLDG00000019078	cpsf4	67	88.764	Seriola_lalandi_dorsalis
ENSAPOG00000004921	cpsf4	100	74.176	ENSSARG00000012416	CPSF4	77	74.176	Sorex_araneus
ENSAPOG00000004921	cpsf4	100	72.527	ENSSPUG00000003549	CPSF4	67	72.527	Sphenodon_punctatus
ENSAPOG00000004921	cpsf4	93	44.578	ENSSPUG00000014803	-	57	44.578	Sphenodon_punctatus
ENSAPOG00000004921	cpsf4	100	75.141	ENSSPAG00000006174	cpsf4	63	75.141	Stegastes_partitus
ENSAPOG00000004921	cpsf4	100	68.362	ENSSSCG00000026896	CPSF4	64	68.362	Sus_scrofa
ENSAPOG00000004921	cpsf4	100	68.362	ENSTGUG00000007552	CPSF4	63	68.362	Taeniopygia_guttata
ENSAPOG00000004921	cpsf4	100	79.661	ENSTRUG00000024220	cpsf4	67	79.661	Takifugu_rubripes
ENSAPOG00000004921	cpsf4	100	81.356	ENSTNIG00000006265	cpsf4	67	81.356	Tetraodon_nigroviridis
ENSAPOG00000004921	cpsf4	100	64.835	ENSTBEG00000011406	CPSF4	77	64.835	Tupaia_belangeri
ENSAPOG00000004921	cpsf4	100	57.459	ENSTTRG00000003007	CPSF4	67	57.459	Tursiops_truncatus
ENSAPOG00000004921	cpsf4	87	66.452	ENSUAMG00000008051	CPSF4	51	66.452	Ursus_americanus
ENSAPOG00000004921	cpsf4	100	70.056	ENSUMAG00000009474	CPSF4	64	70.056	Ursus_maritimus
ENSAPOG00000004921	cpsf4	100	68.927	ENSVVUG00000008824	CPSF4	64	68.927	Vulpes_vulpes
ENSAPOG00000004921	cpsf4	100	64.583	ENSXETG00000009892	cpsf4	68	68.229	Xenopus_tropicalis
ENSAPOG00000004921	cpsf4	98	48.649	ENSXETG00000004641	cpsf4l	66	48.649	Xenopus_tropicalis
ENSAPOG00000004921	cpsf4	100	81.356	ENSXCOG00000016040	cpsf4	67	81.356	Xiphophorus_couchianus
ENSAPOG00000004921	cpsf4	100	81.356	ENSXMAG00000024670	cpsf4	67	81.356	Xiphophorus_maculatus