EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000004980 (Gene tree)
Gene ID: 110972275
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-1B-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 4968 bases
Position: chrMVNR01003928.1:19835-24802
Accession: 110972275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000003470	MMR_HSR1	PF01926.23	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000011686	-	645	XM_022222666	ENSAPOP00000003470	214 (aa)	XP_022078358	UPI000B9074A0

Gene Model

Click here to download ENSAPOG00000004980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000004980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000004980	-	79	42.308	ENSAPOG00000019727	rab33ba	74	42.308
ENSAPOG00000004980	-	77	39.053	ENSAPOG00000002585	RAB7A	82	39.053
ENSAPOG00000004980	-	97	33.175	ENSAPOG00000021928	rab9a	95	33.175
ENSAPOG00000004980	-	74	39.130	ENSAPOG00000003165	rab34a	61	39.130
ENSAPOG00000004980	-	79	43.860	ENSAPOG00000005301	RAB39B	80	43.860
ENSAPOG00000004980	-	86	41.872	ENSAPOG00000008641	rab14	94	41.872
ENSAPOG00000004980	-	81	48.555	ENSAPOG00000008216	rab25b	84	47.647
ENSAPOG00000004980	-	98	42.381	ENSAPOG00000021268	rab25a	96	42.381
ENSAPOG00000004980	-	78	53.012	ENSAPOG00000022625	rab30	82	53.012
ENSAPOG00000004980	-	90	49.479	ENSAPOG00000018256	rab11a	89	49.479
ENSAPOG00000004980	-	73	36.538	ENSAPOG00000008892	rab23	74	34.659
ENSAPOG00000004980	-	80	36.628	ENSAPOG00000011363	-	75	36.628
ENSAPOG00000004980	-	55	32.203	ENSAPOG00000023583	arl8a	61	32.203
ENSAPOG00000004980	-	73	35.849	ENSAPOG00000023708	rabl2	68	35.849
ENSAPOG00000004980	-	77	41.212	ENSAPOG00000011559	rab22a	83	41.212
ENSAPOG00000004980	-	72	37.736	ENSAPOG00000005603	RAB9A	73	37.736
ENSAPOG00000004980	-	80	43.353	ENSAPOG00000009188	rab42a	79	43.353
ENSAPOG00000004980	-	75	50.000	ENSAPOG00000019881	rab18b	79	50.000
ENSAPOG00000004980	-	79	51.786	ENSAPOG00000023455	rab11bb	77	51.786
ENSAPOG00000004980	-	92	76.142	ENSAPOG00000008143	-	98	76.142
ENSAPOG00000004980	-	77	38.788	ENSAPOG00000014783	kras	91	38.150
ENSAPOG00000004980	-	71	32.895	ENSAPOG00000004154	rras2	81	33.537
ENSAPOG00000004980	-	57	30.709	ENSAPOG00000010415	-	61	30.709
ENSAPOG00000004980	-	75	39.752	ENSAPOG00000014397	rab6bb	77	39.752
ENSAPOG00000004980	-	73	39.375	ENSAPOG00000022911	rab36	60	39.375
ENSAPOG00000004980	-	74	40.741	ENSAPOG00000019147	rab34b	57	44.538
ENSAPOG00000004980	-	78	35.119	ENSAPOG00000001356	si:ch73-116o1.2	80	35.119
ENSAPOG00000004980	-	99	41.553	ENSAPOG00000007503	zgc:101559	87	41.553
ENSAPOG00000004980	-	79	33.333	ENSAPOG00000003215	-	92	33.333
ENSAPOG00000004980	-	96	34.286	ENSAPOG00000007269	rab9b	87	34.286
ENSAPOG00000004980	-	80	46.857	ENSAPOG00000006211	RAB15	83	46.857
ENSAPOG00000004980	-	87	32.487	ENSAPOG00000015680	-	97	32.487
ENSAPOG00000004980	-	84	32.597	ENSAPOG00000004311	-	93	32.597
ENSAPOG00000004980	-	68	45.695	ENSAPOG00000005341	-	62	45.695
ENSAPOG00000004980	-	100	71.963	ENSAPOG00000012767	rab1ba	100	71.963
ENSAPOG00000004980	-	75	39.752	ENSAPOG00000016512	-	77	39.752
ENSAPOG00000004980	-	75	51.235	ENSAPOG00000010760	rab18a	79	51.235
ENSAPOG00000004980	-	76	65.432	ENSAPOG00000007363	rab35b	80	65.432
ENSAPOG00000004980	-	77	39.053	ENSAPOG00000016091	-	82	39.053
ENSAPOG00000004980	-	83	56.742	ENSAPOG00000001040	-	89	56.742
ENSAPOG00000004980	-	98	43.779	ENSAPOG00000009138	rab2a	99	43.779
ENSAPOG00000004980	-	78	59.639	ENSAPOG00000008263	si:dkey-16l2.16	79	59.281
ENSAPOG00000004980	-	55	30.508	ENSAPOG00000018714	arl8ba	61	30.508
ENSAPOG00000004980	-	79	50.296	ENSAPOG00000008754	rab15	79	50.296
ENSAPOG00000004980	-	88	43.915	ENSAPOG00000021391	rab5aa	85	43.915
ENSAPOG00000004980	-	76	45.399	ENSAPOG00000016864	rab5c	81	43.017
ENSAPOG00000004980	-	84	82.418	ENSAPOG00000007746	rab1ab	90	82.418
ENSAPOG00000004980	-	79	43.275	ENSAPOG00000014970	-	80	43.275
ENSAPOG00000004980	-	99	45.872	ENSAPOG00000008251	rab11al	96	45.872
ENSAPOG00000004980	-	84	32.597	ENSAPOG00000015316	rhebl1	91	32.597
ENSAPOG00000004980	-	82	38.636	ENSAPOG00000005731	rab6a	80	38.636
ENSAPOG00000004980	-	75	39.752	ENSAPOG00000019100	rab6ba	77	39.752
ENSAPOG00000004980	-	96	38.498	ENSAPOG00000000952	rab33a	92	38.498
ENSAPOG00000004980	-	76	37.195	ENSAPOG00000023684	hrasb	86	37.195

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000004980	-	100	95.794	ENSACIG00000009006	zgc:171927	100	95.794	Amphilophus_citrinellus
ENSAPOG00000004980	-	71	89.677	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSAPOG00000004980	-	100	96.729	ENSAOCG00000024149	-	100	96.729	Amphiprion_ocellaris
ENSAPOG00000004980	-	100	97.196	ENSAPEG00000022171	zgc:171927	99	97.196	Amphiprion_percula
ENSAPOG00000004980	-	100	94.860	ENSATEG00000003430	zgc:171927	100	94.860	Anabas_testudineus
ENSAPOG00000004980	-	100	94.393	ENSACLG00000013734	-	100	94.393	Astatotilapia_calliptera
ENSAPOG00000004980	-	100	80.465	ENSAMXG00000039486	zgc:171927	100	80.465	Astyanax_mexicanus
ENSAPOG00000004980	-	100	91.121	ENSCSEG00000014416	zgc:171927	100	91.121	Cynoglossus_semilaevis
ENSAPOG00000004980	-	100	93.458	ENSCVAG00000009222	zgc:171927	100	93.458	Cyprinodon_variegatus
ENSAPOG00000004980	-	100	79.070	ENSDARG00000033056	zgc:171927	100	79.070	Danio_rerio
ENSAPOG00000004980	-	94	82.178	ENSELUG00000011680	zgc:171927	100	78.704	Esox_lucius
ENSAPOG00000004980	-	100	93.925	ENSFHEG00000022176	zgc:171927	100	93.925	Fundulus_heteroclitus
ENSAPOG00000004980	-	98	80.569	ENSGMOG00000004979	-	97	80.569	Gadus_morhua
ENSAPOG00000004980	-	98	93.301	ENSGAFG00000015702	zgc:171927	84	93.301	Gambusia_affinis
ENSAPOG00000004980	-	100	94.393	ENSGACG00000013401	zgc:171927	99	94.393	Gasterosteus_aculeatus
ENSAPOG00000004980	-	100	94.393	ENSHBUG00000002397	-	100	94.393	Haplochromis_burtoni
ENSAPOG00000004980	-	100	93.458	ENSKMAG00000009856	zgc:171927	100	93.458	Kryptolebias_marmoratus
ENSAPOG00000004980	-	100	91.589	ENSLBEG00000005791	-	100	91.589	Labrus_bergylta
ENSAPOG00000004980	-	98	90.909	ENSLBEG00000027226	-	89	90.909	Labrus_bergylta
ENSAPOG00000004980	-	98	72.381	ENSLOCG00000014692	zgc:171927	96	72.381	Lepisosteus_oculatus
ENSAPOG00000004980	-	100	93.925	ENSMAMG00000020135	zgc:171927	100	93.925	Mastacembelus_armatus
ENSAPOG00000004980	-	100	94.393	ENSMZEG00005024685	-	100	94.393	Maylandia_zebra
ENSAPOG00000004980	-	100	89.252	ENSMMOG00000009833	-	100	89.252	Mola_mola
ENSAPOG00000004980	-	100	92.991	ENSMALG00000021129	zgc:171927	100	92.991	Monopterus_albus
ENSAPOG00000004980	-	100	93.925	ENSNBRG00000006202	zgc:171927	100	93.925	Neolamprologus_brichardi
ENSAPOG00000004980	-	100	92.523	ENSORLG00000000602	zgc:171927	100	92.523	Oryzias_latipes
ENSAPOG00000004980	-	100	92.523	ENSORLG00020021071	zgc:171927	100	92.523	Oryzias_latipes_hni
ENSAPOG00000004980	-	100	92.991	ENSORLG00015010098	zgc:171927	100	92.991	Oryzias_latipes_hsok
ENSAPOG00000004980	-	100	93.458	ENSOMEG00000020594	zgc:171927	100	93.458	Oryzias_melastigma
ENSAPOG00000004980	-	100	93.458	ENSPFOG00000013810	zgc:171927	99	93.458	Poecilia_formosa
ENSAPOG00000004980	-	100	92.523	ENSPLAG00000005869	zgc:171927	100	92.523	Poecilia_latipinna
ENSAPOG00000004980	-	100	93.458	ENSPMEG00000022350	zgc:171927	100	93.458	Poecilia_mexicana
ENSAPOG00000004980	-	100	94.393	ENSPREG00000017517	zgc:171927	100	94.393	Poecilia_reticulata
ENSAPOG00000004980	-	100	94.393	ENSPNYG00000007520	-	100	94.393	Pundamilia_nyererei
ENSAPOG00000004980	-	100	80.465	ENSPNAG00000029574	zgc:171927	100	80.465	Pygocentrus_nattereri
ENSAPOG00000004980	-	100	79.535	ENSSFOG00015005464	zgc:171927	99	79.535	Scleropages_formosus
ENSAPOG00000004980	-	100	91.121	ENSSMAG00000004416	-	100	91.121	Scophthalmus_maximus
ENSAPOG00000004980	-	100	97.196	ENSSDUG00000004445	zgc:171927	100	97.196	Seriola_dumerili
ENSAPOG00000004980	-	100	97.196	ENSSLDG00000018024	zgc:171927	100	97.196	Seriola_lalandi_dorsalis
ENSAPOG00000004980	-	100	99.065	ENSSPAG00000013533	zgc:171927	100	99.065	Stegastes_partitus
ENSAPOG00000004980	-	100	94.860	ENSXCOG00000010695	zgc:171927	100	94.860	Xiphophorus_couchianus
ENSAPOG00000004980	-	100	94.860	ENSXMAG00000004683	zgc:171927	100	94.860	Xiphophorus_maculatus