EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000005036 (Gene tree)
Gene ID: 110967130
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 103393 bases
Position: chrMVNR01001738.1:32707-136099
Accession: 110967130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000023266	CPSF_A	PF03178.15	4.1e-85	1	1
ENSAPOP00000023252	CPSF_A	PF03178.15	3.5e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000011727	-	2946	-	ENSAPOP00000023252	981 (aa)	-	-
ENSAPOT00000011691	-	6557	XM_022216640	ENSAPOP00000023266	1151 (aa)	XP_022072332	UPI000B9049E8

Gene Model

Click here to download ENSAPOG00000005036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000005036's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000005036	ddb1	99	91.429	ENSG00000167986	DDB1	100	95.890	Homo_sapiens
ENSAPOG00000005036	ddb1	99	91.531	ENSAMEG00000016518	DDB1	98	91.465	Ailuropoda_melanoleuca
ENSAPOG00000005036	ddb1	100	98.675	ENSACIG00000020624	ddb1	100	98.675	Amphilophus_citrinellus
ENSAPOG00000005036	ddb1	99	99.694	ENSAOCG00000003066	ddb1	98	99.641	Amphiprion_ocellaris
ENSAPOG00000005036	ddb1	99	99.694	ENSAPEG00000000092	ddb1	99	99.534	Amphiprion_percula
ENSAPOG00000005036	ddb1	99	99.286	ENSATEG00000020571	ddb1	97	99.070	Anabas_testudineus
ENSAPOG00000005036	ddb1	99	90.176	ENSAPLG00000007174	DDB1	97	89.764	Anas_platyrhynchos
ENSAPOG00000005036	ddb1	99	90.714	ENSACAG00000017758	DDB1	98	90.575	Anolis_carolinensis
ENSAPOG00000005036	ddb1	99	91.429	ENSANAG00000021878	DDB1	98	91.375	Aotus_nancymaae
ENSAPOG00000005036	ddb1	99	98.571	ENSACLG00000012401	ddb1	99	97.987	Astatotilapia_calliptera
ENSAPOG00000005036	ddb1	99	91.429	ENSBTAG00000021569	DDB1	91	91.375	Bos_taurus
ENSAPOG00000005036	ddb1	100	37.972	WBGene00010890	ddb-1	98	37.160	Caenorhabditis_elegans
ENSAPOG00000005036	ddb1	99	91.429	ENSCJAG00000019319	DDB1	98	91.375	Callithrix_jacchus
ENSAPOG00000005036	ddb1	99	91.531	ENSCAFG00000016264	DDB1	99	91.442	Canis_familiaris
ENSAPOG00000005036	ddb1	99	91.531	ENSCAFG00020012722	DDB1	99	91.442	Canis_lupus_dingo
ENSAPOG00000005036	ddb1	99	91.429	ENSCHIG00000014969	DDB1	98	91.375	Capra_hircus
ENSAPOG00000005036	ddb1	99	91.020	ENSTSYG00000008027	DDB1	98	91.015	Carlito_syrichta
ENSAPOG00000005036	ddb1	98	91.449	ENSCAPG00000010786	DDB1	98	91.484	Cavia_aperea
ENSAPOG00000005036	ddb1	99	91.429	ENSCPOG00000009956	DDB1	98	91.465	Cavia_porcellus
ENSAPOG00000005036	ddb1	99	91.429	ENSCCAG00000035883	DDB1	98	91.375	Cebus_capucinus
ENSAPOG00000005036	ddb1	99	89.113	ENSCATG00000044495	DDB1	98	88.889	Cercocebus_atys
ENSAPOG00000005036	ddb1	99	91.531	ENSCLAG00000004126	DDB1	98	91.554	Chinchilla_lanigera
ENSAPOG00000005036	ddb1	99	91.429	ENSCSAG00000006392	DDB1	98	91.375	Chlorocebus_sabaeus
ENSAPOG00000005036	ddb1	85	90.808	ENSCHOG00000011377	DDB1	90	84.470	Choloepus_hoffmanni
ENSAPOG00000005036	ddb1	99	90.918	ENSCPBG00000017728	DDB1	98	90.844	Chrysemys_picta_bellii
ENSAPOG00000005036	ddb1	99	61.895	ENSCING00000007437	-	99	60.522	Ciona_intestinalis
ENSAPOG00000005036	ddb1	93	61.297	ENSCSAVG00000004783	-	100	60.285	Ciona_savignyi
ENSAPOG00000005036	ddb1	99	91.429	ENSCANG00000019948	DDB1	98	91.375	Colobus_angolensis_palliatus
ENSAPOG00000005036	ddb1	99	91.531	ENSCGRG00001016599	Ddb1	98	91.465	Cricetulus_griseus_chok1gshd
ENSAPOG00000005036	ddb1	99	91.531	ENSCGRG00000013427	Ddb1	98	91.465	Cricetulus_griseus_crigri
ENSAPOG00000005036	ddb1	99	98.469	ENSCSEG00000012499	ddb1	100	96.866	Cynoglossus_semilaevis
ENSAPOG00000005036	ddb1	99	97.653	ENSCVAG00000019531	ddb1	99	97.484	Cyprinodon_variegatus
ENSAPOG00000005036	ddb1	99	92.049	ENSDARG00000074431	ddb1	98	92.563	Danio_rerio
ENSAPOG00000005036	ddb1	99	91.531	ENSDNOG00000014884	DDB1	97	91.442	Dasypus_novemcinctus
ENSAPOG00000005036	ddb1	81	95.000	ENSDORG00000000127	Ddb1	97	95.000	Dipodomys_ordii
ENSAPOG00000005036	ddb1	99	61.015	FBgn0260962	pic	98	60.858	Drosophila_melanogaster
ENSAPOG00000005036	ddb1	75	30.065	FBgn0024698	Cpsf160	67	30.065	Drosophila_melanogaster
ENSAPOG00000005036	ddb1	68	94.882	ENSETEG00000001053	-	69	94.882	Echinops_telfairi
ENSAPOG00000005036	ddb1	91	84.477	ENSEBUG00000014593	ddb1	97	84.477	Eptatretus_burgeri
ENSAPOG00000005036	ddb1	99	91.531	ENSEASG00005008184	DDB1	98	91.465	Equus_asinus_asinus
ENSAPOG00000005036	ddb1	99	91.531	ENSECAG00000012136	DDB1	98	91.465	Equus_caballus
ENSAPOG00000005036	ddb1	90	86.667	ENSEEUG00000003194	DDB1	85	87.374	Erinaceus_europaeus
ENSAPOG00000005036	ddb1	99	97.245	ENSELUG00000023868	ddb1	98	97.217	Esox_lucius
ENSAPOG00000005036	ddb1	99	91.531	ENSFCAG00000029716	DDB1	98	91.465	Felis_catus
ENSAPOG00000005036	ddb1	99	90.918	ENSFALG00000011981	DDB1	98	90.421	Ficedula_albicollis
ENSAPOG00000005036	ddb1	99	91.327	ENSFDAG00000005128	DDB1	98	91.375	Fukomys_damarensis
ENSAPOG00000005036	ddb1	89	98.947	ENSFHEG00000022133	ddb1	97	96.516	Fundulus_heteroclitus
ENSAPOG00000005036	ddb1	79	98.662	ENSGMOG00000019386	ddb1	94	98.662	Gadus_morhua
ENSAPOG00000005036	ddb1	99	91.122	ENSGALG00000042333	DDB1	98	90.934	Gallus_gallus
ENSAPOG00000005036	ddb1	99	98.469	ENSGAFG00000013142	ddb1	99	98.322	Gambusia_affinis
ENSAPOG00000005036	ddb1	99	98.571	ENSGACG00000017182	ddb1	100	97.434	Gasterosteus_aculeatus
ENSAPOG00000005036	ddb1	94	90.693	ENSGAGG00000014124	DDB1	98	90.643	Gopherus_agassizii
ENSAPOG00000005036	ddb1	99	91.429	ENSGGOG00000004052	DDB1	98	91.375	Gorilla_gorilla
ENSAPOG00000005036	ddb1	99	98.571	ENSHBUG00000008873	ddb1	98	98.564	Haplochromis_burtoni
ENSAPOG00000005036	ddb1	99	91.327	ENSHGLG00000018430	DDB1	98	91.375	Heterocephalus_glaber_female
ENSAPOG00000005036	ddb1	99	90.204	ENSHGLG00100014475	DDB1	98	90.386	Heterocephalus_glaber_male
ENSAPOG00000005036	ddb1	99	98.469	ENSHCOG00000018670	ddb1	98	98.141	Hippocampus_comes
ENSAPOG00000005036	ddb1	99	96.122	ENSIPUG00000005612	DDB1	98	96.320	Ictalurus_punctatus
ENSAPOG00000005036	ddb1	99	91.429	ENSSTOG00000007552	DDB1	98	91.375	Ictidomys_tridecemlineatus
ENSAPOG00000005036	ddb1	99	91.429	ENSJJAG00000017769	Ddb1	98	91.285	Jaculus_jaculus
ENSAPOG00000005036	ddb1	99	98.469	ENSKMAG00000002315	ddb1	99	98.229	Kryptolebias_marmoratus
ENSAPOG00000005036	ddb1	98	99.168	ENSLBEG00000017065	ddb1	99	99.168	Labrus_bergylta
ENSAPOG00000005036	ddb1	99	91.327	ENSLACG00000017611	DDB1	98	90.771	Latimeria_chalumnae
ENSAPOG00000005036	ddb1	91	86.877	ENSLOCG00000000012	ddb1	98	87.987	Lepisosteus_oculatus
ENSAPOG00000005036	ddb1	99	91.327	ENSLAFG00000011513	DDB1	98	91.285	Loxodonta_africana
ENSAPOG00000005036	ddb1	99	91.429	ENSMFAG00000042035	DDB1	98	91.375	Macaca_fascicularis
ENSAPOG00000005036	ddb1	99	91.429	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSAPOG00000005036	ddb1	99	91.429	ENSMNEG00000031559	DDB1	98	91.375	Macaca_nemestrina
ENSAPOG00000005036	ddb1	99	91.429	ENSMLEG00000044136	DDB1	98	91.375	Mandrillus_leucophaeus
ENSAPOG00000005036	ddb1	99	99.388	ENSMAMG00000014372	ddb1	98	99.372	Mastacembelus_armatus
ENSAPOG00000005036	ddb1	99	98.571	ENSMZEG00005013835	ddb1	98	98.474	Maylandia_zebra
ENSAPOG00000005036	ddb1	93	90.560	ENSMGAG00000004990	DDB1	98	90.076	Meleagris_gallopavo
ENSAPOG00000005036	ddb1	99	91.531	ENSMAUG00000012926	Ddb1	98	91.465	Mesocricetus_auratus
ENSAPOG00000005036	ddb1	99	91.633	ENSMICG00000013703	DDB1	98	91.554	Microcebus_murinus
ENSAPOG00000005036	ddb1	99	91.429	ENSMOCG00000020499	Ddb1	98	91.375	Microtus_ochrogaster
ENSAPOG00000005036	ddb1	100	99.286	ENSMMOG00000001758	ddb1	100	99.286	Mola_mola
ENSAPOG00000005036	ddb1	99	82.503	ENSMODG00000020353	DDB1	98	82.374	Monodelphis_domestica
ENSAPOG00000005036	ddb1	99	99.286	ENSMALG00000014071	ddb1	98	99.282	Monopterus_albus
ENSAPOG00000005036	ddb1	99	91.531	MGP_CAROLIEiJ_G0022695	Ddb1	98	91.465	Mus_caroli
ENSAPOG00000005036	ddb1	99	91.633	ENSMUSG00000024740	Ddb1	98	91.554	Mus_musculus
ENSAPOG00000005036	ddb1	99	91.531	MGP_PahariEiJ_G0014189	Ddb1	98	91.465	Mus_pahari
ENSAPOG00000005036	ddb1	99	91.633	MGP_SPRETEiJ_G0023609	Ddb1	98	91.554	Mus_spretus
ENSAPOG00000005036	ddb1	99	90.714	ENSMPUG00000014200	DDB1	98	88.420	Mustela_putorius_furo
ENSAPOG00000005036	ddb1	99	91.633	ENSMLUG00000013232	DDB1	98	91.554	Myotis_lucifugus
ENSAPOG00000005036	ddb1	99	91.429	ENSNGAG00000009384	Ddb1	98	91.375	Nannospalax_galili
ENSAPOG00000005036	ddb1	99	98.673	ENSNBRG00000019581	ddb1	98	98.654	Neolamprologus_brichardi
ENSAPOG00000005036	ddb1	99	88.609	ENSNLEG00000002022	DDB1	98	88.444	Nomascus_leucogenys
ENSAPOG00000005036	ddb1	88	100.000	ENSMEUG00000001099	DDB1	90	95.331	Notamacropus_eugenii
ENSAPOG00000005036	ddb1	89	87.830	ENSOPRG00000008254	DDB1	88	82.669	Ochotona_princeps
ENSAPOG00000005036	ddb1	99	91.531	ENSODEG00000002419	DDB1	98	91.554	Octodon_degus
ENSAPOG00000005036	ddb1	99	98.673	ENSONIG00000005804	ddb1	98	98.654	Oreochromis_niloticus
ENSAPOG00000005036	ddb1	89	90.940	ENSOANG00000004897	DDB1	97	90.855	Ornithorhynchus_anatinus
ENSAPOG00000005036	ddb1	99	91.531	ENSOCUG00000001667	DDB1	98	91.375	Oryctolagus_cuniculus
ENSAPOG00000005036	ddb1	99	97.857	ENSORLG00000001399	ddb1	98	97.791	Oryzias_latipes
ENSAPOG00000005036	ddb1	99	97.755	ENSORLG00020001277	ddb1	97	96.425	Oryzias_latipes_hni
ENSAPOG00000005036	ddb1	99	97.857	ENSORLG00015002080	ddb1	99	97.674	Oryzias_latipes_hsok
ENSAPOG00000005036	ddb1	99	98.163	ENSOMEG00000006181	ddb1	99	96.171	Oryzias_melastigma
ENSAPOG00000005036	ddb1	99	91.633	ENSOGAG00000016103	DDB1	98	91.554	Otolemur_garnettii
ENSAPOG00000005036	ddb1	99	91.429	ENSOARG00000011716	DDB1	97	91.375	Ovis_aries
ENSAPOG00000005036	ddb1	99	91.429	ENSPPAG00000035343	DDB1	98	91.375	Pan_paniscus
ENSAPOG00000005036	ddb1	99	91.531	ENSPPRG00000013300	DDB1	98	91.465	Panthera_pardus
ENSAPOG00000005036	ddb1	98	91.554	ENSPTIG00000006909	DDB1	96	91.484	Panthera_tigris_altaica
ENSAPOG00000005036	ddb1	99	91.429	ENSPTRG00000003737	DDB1	98	91.375	Pan_troglodytes
ENSAPOG00000005036	ddb1	99	91.429	ENSPANG00000000242	DDB1	98	91.375	Papio_anubis
ENSAPOG00000005036	ddb1	99	96.327	ENSPKIG00000019213	ddb1	94	96.365	Paramormyrops_kingsleyae
ENSAPOG00000005036	ddb1	98	90.249	ENSPSIG00000013275	DDB1	98	90.255	Pelodiscus_sinensis
ENSAPOG00000005036	ddb1	100	98.879	ENSPMGG00000021179	ddb1	100	98.879	Periophthalmus_magnuspinnatus
ENSAPOG00000005036	ddb1	99	91.531	ENSPEMG00000012241	Ddb1	98	91.465	Peromyscus_maniculatus_bairdii
ENSAPOG00000005036	ddb1	98	86.458	ENSPMAG00000008479	ddb1	100	86.837	Petromyzon_marinus
ENSAPOG00000005036	ddb1	99	91.837	ENSPCIG00000002643	DDB1	98	91.644	Phascolarctos_cinereus
ENSAPOG00000005036	ddb1	99	98.469	ENSPFOG00000002768	ddb1	98	98.027	Poecilia_formosa
ENSAPOG00000005036	ddb1	99	98.469	ENSPLAG00000017227	ddb1	98	98.233	Poecilia_latipinna
ENSAPOG00000005036	ddb1	99	98.469	ENSPMEG00000011398	ddb1	98	98.233	Poecilia_mexicana
ENSAPOG00000005036	ddb1	99	98.469	ENSPREG00000004440	ddb1	98	98.233	Poecilia_reticulata
ENSAPOG00000005036	ddb1	99	87.373	ENSPPYG00000003193	DDB1	98	87.131	Pongo_abelii
ENSAPOG00000005036	ddb1	82	89.173	ENSPCAG00000011040	DDB1	82	89.425	Procavia_capensis
ENSAPOG00000005036	ddb1	99	90.937	ENSPCOG00000015176	DDB1	98	90.314	Propithecus_coquereli
ENSAPOG00000005036	ddb1	99	91.327	ENSPVAG00000003847	DDB1	98	91.285	Pteropus_vampyrus
ENSAPOG00000005036	ddb1	99	96.939	ENSPNAG00000006635	ddb1	97	96.925	Pygocentrus_nattereri
ENSAPOG00000005036	ddb1	99	91.633	ENSRNOG00000020715	Ddb1	98	91.554	Rattus_norvegicus
ENSAPOG00000005036	ddb1	99	91.429	ENSRBIG00000033611	DDB1	98	91.375	Rhinopithecus_bieti
ENSAPOG00000005036	ddb1	99	91.429	ENSRROG00000041407	DDB1	98	91.375	Rhinopithecus_roxellana
ENSAPOG00000005036	ddb1	99	91.531	ENSSBOG00000019775	DDB1	98	91.465	Saimiri_boliviensis_boliviensis
ENSAPOG00000005036	ddb1	93	88.791	ENSSHAG00000011600	DDB1	97	89.070	Sarcophilus_harrisii
ENSAPOG00000005036	ddb1	99	96.531	ENSSFOG00015011151	ddb1	97	96.375	Scleropages_formosus
ENSAPOG00000005036	ddb1	99	98.878	ENSSMAG00000009495	ddb1	98	98.923	Scophthalmus_maximus
ENSAPOG00000005036	ddb1	99	99.388	ENSSDUG00000004642	ddb1	98	99.372	Seriola_dumerili
ENSAPOG00000005036	ddb1	99	99.388	ENSSLDG00000015804	ddb1	98	99.372	Seriola_lalandi_dorsalis
ENSAPOG00000005036	ddb1	69	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSAPOG00000005036	ddb1	99	90.816	ENSSPUG00000019338	DDB1	98	90.754	Sphenodon_punctatus
ENSAPOG00000005036	ddb1	99	99.796	ENSSPAG00000009888	ddb1	99	99.535	Stegastes_partitus
ENSAPOG00000005036	ddb1	99	90.918	ENSSSCG00000013094	DDB1	98	90.476	Sus_scrofa
ENSAPOG00000005036	ddb1	99	91.327	ENSTGUG00000006414	DDB1	98	90.485	Taeniopygia_guttata
ENSAPOG00000005036	ddb1	99	98.061	ENSTRUG00000016682	ddb1	98	97.670	Takifugu_rubripes
ENSAPOG00000005036	ddb1	86	91.795	ENSTNIG00000009565	ddb1	97	92.520	Tetraodon_nigroviridis
ENSAPOG00000005036	ddb1	91	84.818	ENSTTRG00000011055	DDB1	92	85.792	Tursiops_truncatus
ENSAPOG00000005036	ddb1	99	91.531	ENSUAMG00000017793	DDB1	93	91.442	Ursus_americanus
ENSAPOG00000005036	ddb1	99	91.531	ENSUMAG00000011788	DDB1	98	91.442	Ursus_maritimus
ENSAPOG00000005036	ddb1	94	86.566	ENSVPAG00000007963	DDB1	89	88.000	Vicugna_pacos
ENSAPOG00000005036	ddb1	99	91.531	ENSVVUG00000004987	DDB1	98	91.465	Vulpes_vulpes
ENSAPOG00000005036	ddb1	100	88.900	ENSXETG00000008820	ddb1	98	88.640	Xenopus_tropicalis
ENSAPOG00000005036	ddb1	100	98.267	ENSXCOG00000013956	ddb1	100	98.267	Xiphophorus_couchianus
ENSAPOG00000005036	ddb1	99	98.265	ENSXMAG00000000022	ddb1	99	98.136	Xiphophorus_maculatus