EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000005043 (Gene tree)
Gene ID: 110965320
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 2572 bases
Position: chrMVNR01001402.1:171780-174351
Accession: 110965320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000003507	zf-C2H2	PF00096.26	6e-20	1	5
ENSAPOP00000003507	zf-C2H2	PF00096.26	6e-20	2	5
ENSAPOP00000003507	zf-C2H2	PF00096.26	6e-20	3	5
ENSAPOP00000003507	zf-C2H2	PF00096.26	6e-20	4	5
ENSAPOP00000003507	zf-C2H2	PF00096.26	6e-20	5	5
ENSAPOP00000003507	zf-met	PF12874.7	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000011621	-	1465	XM_022214318	ENSAPOP00000003507	399 (aa)	XP_022070010	UPI000B8FBF25

Gene Model

Click here to download ENSAPOG00000005043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000005043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000005043	gfi1aa	58	42.718	ENSAPOG00000018586	-	76	42.718
ENSAPOG00000005043	gfi1aa	50	43.125	ENSAPOG00000020368	-	99	43.125
ENSAPOG00000005043	gfi1aa	51	42.466	ENSAPOG00000021966	-	52	42.466
ENSAPOG00000005043	gfi1aa	88	45.161	ENSAPOG00000005097	znf236	58	45.161
ENSAPOG00000005043	gfi1aa	100	65.185	ENSAPOG00000015189	gfi1ab	100	64.938
ENSAPOG00000005043	gfi1aa	79	39.634	ENSAPOG00000003028	-	57	39.634
ENSAPOG00000005043	gfi1aa	63	45.255	ENSAPOG00000006303	-	87	44.737
ENSAPOG00000005043	gfi1aa	50	39.881	ENSAPOG00000022174	-	97	39.881
ENSAPOG00000005043	gfi1aa	55	50.000	ENSAPOG00000020864	-	55	50.000
ENSAPOG00000005043	gfi1aa	64	38.136	ENSAPOG00000018492	-	70	38.136
ENSAPOG00000005043	gfi1aa	51	45.946	ENSAPOG00000021383	-	80	44.643
ENSAPOG00000005043	gfi1aa	60	44.615	ENSAPOG00000004878	-	82	44.615
ENSAPOG00000005043	gfi1aa	58	44.720	ENSAPOG00000019960	-	92	44.720
ENSAPOG00000005043	gfi1aa	50	40.556	ENSAPOG00000008386	-	86	40.556
ENSAPOG00000005043	gfi1aa	62	46.479	ENSAPOG00000004628	-	99	43.243
ENSAPOG00000005043	gfi1aa	65	44.118	ENSAPOG00000003666	-	92	42.857
ENSAPOG00000005043	gfi1aa	54	41.221	ENSAPOG00000010200	-	54	41.221
ENSAPOG00000005043	gfi1aa	50	38.926	ENSAPOG00000023504	-	68	38.926
ENSAPOG00000005043	gfi1aa	50	39.706	ENSAPOG00000002213	-	90	39.706
ENSAPOG00000005043	gfi1aa	51	45.763	ENSAPOG00000007955	-	65	45.763
ENSAPOG00000005043	gfi1aa	55	40.476	ENSAPOG00000022113	-	82	40.476
ENSAPOG00000005043	gfi1aa	63	40.288	ENSAPOG00000011470	-	77	40.288
ENSAPOG00000005043	gfi1aa	67	42.105	ENSAPOG00000001054	-	93	44.048
ENSAPOG00000005043	gfi1aa	55	44.375	ENSAPOG00000022086	-	98	44.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000005043	gfi1aa	100	88.722	ENSACIG00000021378	gfi1aa	100	88.722	Amphilophus_citrinellus
ENSAPOG00000005043	gfi1aa	100	98.747	ENSAOCG00000022957	gfi1aa	100	98.747	Amphiprion_ocellaris
ENSAPOG00000005043	gfi1aa	100	98.997	ENSAPEG00000014539	gfi1aa	100	98.997	Amphiprion_percula
ENSAPOG00000005043	gfi1aa	100	87.250	ENSATEG00000019026	gfi1aa	99	91.892	Anabas_testudineus
ENSAPOG00000005043	gfi1aa	100	90.226	ENSACLG00000008641	gfi1aa	100	90.226	Astatotilapia_calliptera
ENSAPOG00000005043	gfi1aa	100	65.174	ENSDARG00000020746	gfi1aa	100	64.128	Danio_rerio
ENSAPOG00000005043	gfi1aa	100	86.967	ENSHBUG00000007389	gfi1aa	100	86.967	Haplochromis_burtoni
ENSAPOG00000005043	gfi1aa	100	80.702	ENSKMAG00000002148	gfi1aa	100	80.645	Kryptolebias_marmoratus
ENSAPOG00000005043	gfi1aa	100	82.836	ENSLBEG00000006603	gfi1aa	100	82.836	Labrus_bergylta
ENSAPOG00000005043	gfi1aa	100	84.500	ENSMAMG00000004896	gfi1aa	100	83.000	Mastacembelus_armatus
ENSAPOG00000005043	gfi1aa	100	90.226	ENSMZEG00005004578	gfi1aa	100	90.226	Maylandia_zebra
ENSAPOG00000005043	gfi1aa	82	80.952	ENSMMOG00000006167	gfi1aa	99	80.952	Mola_mola
ENSAPOG00000005043	gfi1aa	100	89.975	ENSNBRG00000002673	gfi1aa	100	89.975	Neolamprologus_brichardi
ENSAPOG00000005043	gfi1aa	100	87.719	ENSPNYG00000002189	gfi1aa	100	87.719	Pundamilia_nyererei
ENSAPOG00000005043	gfi1aa	100	82.801	ENSSMAG00000006797	gfi1aa	100	83.292	Scophthalmus_maximus
ENSAPOG00000005043	gfi1aa	100	90.299	ENSSDUG00000011654	gfi1aa	100	90.299	Seriola_dumerili
ENSAPOG00000005043	gfi1aa	100	86.849	ENSSLDG00000016512	gfi1aa	100	86.849	Seriola_lalandi_dorsalis
ENSAPOG00000005043	gfi1aa	98	97.654	ENSSPAG00000000927	gfi1aa	94	97.654	Stegastes_partitus
ENSAPOG00000005043	gfi1aa	100	82.793	ENSTRUG00000004744	gfi1aa	100	82.793	Takifugu_rubripes