EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000005095 (Gene tree)
Gene ID: -
Gene Symbol: zgc:152968
Alias: -
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 8199 bases
Position: chrMVNR01000108.1:1173357-1181555
Accession: 110949434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000023339	RNase_T	PF00929.24	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000011546	-	2535	XM_022191513	ENSAPOP00000023339	844 (aa)	XP_022047205	-

Gene Model

Click here to download ENSAPOG00000005095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000005095's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000005095	zgc:152968	99	67.958	ENSACIG00000002527	zgc:152968	87	68.310	Amphilophus_citrinellus
ENSAPOG00000005095	zgc:152968	100	86.571	ENSAOCG00000018049	-	88	83.032	Amphiprion_ocellaris
ENSAPOG00000005095	zgc:152968	92	89.880	ENSAPEG00000012559	zgc:152968	73	89.880	Amphiprion_percula
ENSAPOG00000005095	zgc:152968	99	79.075	ENSACLG00000020524	-	87	67.188	Astatotilapia_calliptera
ENSAPOG00000005095	zgc:152968	99	63.130	ENSCVAG00000015400	zgc:152968	87	63.130	Cyprinodon_variegatus
ENSAPOG00000005095	zgc:152968	81	59.856	ENSDARG00000037002	zgc:152968	56	60.294	Danio_rerio
ENSAPOG00000005095	zgc:152968	75	66.180	ENSELUG00000014272	zgc:152968	54	66.180	Esox_lucius
ENSAPOG00000005095	zgc:152968	94	72.439	ENSFHEG00000003641	-	94	53.521	Fundulus_heteroclitus
ENSAPOG00000005095	zgc:152968	85	76.284	ENSGAFG00000016810	-	70	75.904	Gambusia_affinis
ENSAPOG00000005095	zgc:152968	95	78.068	ENSHBUG00000007524	-	71	78.068	Haplochromis_burtoni
ENSAPOG00000005095	zgc:152968	100	46.221	ENSIPUG00000004633	zgc:152968	99	46.221	Ictalurus_punctatus
ENSAPOG00000005095	zgc:152968	93	59.322	ENSLBEG00000026485	zgc:152968	88	59.322	Labrus_bergylta
ENSAPOG00000005095	zgc:152968	99	69.615	ENSMAMG00000005920	-	76	69.615	Mastacembelus_armatus
ENSAPOG00000005095	zgc:152968	99	79.075	ENSMZEG00005013783	-	87	68.070	Maylandia_zebra
ENSAPOG00000005095	zgc:152968	86	76.429	ENSMMOG00000018072	zgc:152968	88	78.304	Mola_mola
ENSAPOG00000005095	zgc:152968	93	61.224	ENSMALG00000003536	-	83	61.672	Monopterus_albus
ENSAPOG00000005095	zgc:152968	94	77.396	ENSONIG00000016897	-	85	77.696	Oreochromis_niloticus
ENSAPOG00000005095	zgc:152968	77	68.445	ENSORLG00020012504	-	81	68.445	Oryzias_latipes_hni
ENSAPOG00000005095	zgc:152968	100	49.119	ENSOMEG00000008840	-	100	49.229	Oryzias_melastigma
ENSAPOG00000005095	zgc:152968	87	73.735	ENSPFOG00000006104	-	71	75.122	Poecilia_formosa
ENSAPOG00000005095	zgc:152968	91	67.767	ENSPLAG00000005034	-	81	67.767	Poecilia_latipinna
ENSAPOG00000005095	zgc:152968	87	73.976	ENSPMEG00000018012	-	65	73.976	Poecilia_mexicana
ENSAPOG00000005095	zgc:152968	86	74.817	ENSPREG00000007481	-	66	74.817	Poecilia_reticulata
ENSAPOG00000005095	zgc:152968	51	85.185	ENSSFOG00015023869	zgc:152968	50	85.185	Scleropages_formosus
ENSAPOG00000005095	zgc:152968	91	76.214	ENSSMAG00000008149	-	66	76.214	Scophthalmus_maximus
ENSAPOG00000005095	zgc:152968	99	78.692	ENSSDUG00000022323	-	77	79.319	Seriola_dumerili
ENSAPOG00000005095	zgc:152968	89	79.319	ENSSLDG00000018799	zgc:152968	75	79.319	Seriola_lalandi_dorsalis
ENSAPOG00000005095	zgc:152968	93	81.265	ENSSPAG00000007632	-	77	81.265	Stegastes_partitus
ENSAPOG00000005095	zgc:152968	92	73.479	ENSTRUG00000025441	zgc:152968	68	73.479	Takifugu_rubripes
ENSAPOG00000005095	zgc:152968	85	75.426	ENSXMAG00000026483	-	64	75.426	Xiphophorus_maculatus