EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000005297 (Gene tree)
Gene ID: 110953512
Gene Symbol: prpf38b
Alias: wu:fc43b05|zgc:63496
Full Name: pre-mRNA-splicing factor 38B-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 6888 bases
Position: chrMVNR01000299.1:6726-13613
Accession: 110953512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000023477	PRP38	PF03371.15	2.1e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000011174	-	3434	XM_022197560	ENSAPOP00000023477	469 (aa)	XP_022053252	UPI000B9089BC

Gene Model

Click here to download ENSAPOG00000005297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000005297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000005297	prpf38b	100	100.000	ENSAPOG00000012791	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000005297	prpf38b	100	98.721	ENSAOCG00000012675	prpf38b	91	98.721	Amphiprion_ocellaris
ENSAPOG00000005297	prpf38b	100	99.360	ENSAPEG00000010974	prpf38b	100	99.360	Amphiprion_percula
ENSAPOG00000005297	prpf38b	98	91.503	ENSACLG00000001712	prpf38b	62	94.792	Astatotilapia_calliptera
ENSAPOG00000005297	prpf38b	97	69.309	ENSDARG00000053101	prpf38b	95	89.634	Danio_rerio
ENSAPOG00000005297	prpf38b	100	85.075	ENSFHEG00000002861	prpf38b	62	93.056	Fundulus_heteroclitus
ENSAPOG00000005297	prpf38b	100	83.789	ENSGACG00000015154	prpf38b	70	92.388	Gasterosteus_aculeatus
ENSAPOG00000005297	prpf38b	98	90.632	ENSHBUG00000022496	prpf38b	62	94.792	Haplochromis_burtoni
ENSAPOG00000005297	prpf38b	93	65.086	ENSIPUG00000014942	prpf38b	58	81.655	Ictalurus_punctatus
ENSAPOG00000005297	prpf38b	100	86.354	ENSLBEG00000024500	prpf38b	89	95.122	Labrus_bergylta
ENSAPOG00000005297	prpf38b	100	92.144	ENSMAMG00000010641	prpf38b	100	91.507	Mastacembelus_armatus
ENSAPOG00000005297	prpf38b	98	91.503	ENSMZEG00005025536	prpf38b	62	94.792	Maylandia_zebra
ENSAPOG00000005297	prpf38b	98	90.632	ENSPNYG00000007625	prpf38b	62	94.792	Pundamilia_nyererei
ENSAPOG00000005297	prpf38b	100	97.655	ENSSPAG00000023160	-	100	97.655	Stegastes_partitus