EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000005764 (Gene tree)
Gene ID: -
Gene Symbol: chd1
Alias: fc26h11|fk85d05|si:dkey-106m21.4|wu:fc26h11|wu:fk85d05|zgc:173506
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 29924 bases
Position: chrMVNR01002836.1:26505-56428
Accession: 110970705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000004108	ResIII	PF04851.15	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000010612	-	3510	XM_022221008	ENSAPOP00000004108	1169 (aa)	XP_022076700	-

Gene Model

Click here to download ENSAPOG00000005764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000005764's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000005764	chd1	97	64.945	ENSAPOG00000008913	chd2	67	64.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000005764	chd1	97	82.971	ENSG00000153922	CHD1	67	82.627	Homo_sapiens
ENSAPOG00000005764	chd1	98	94.965	ENSAOCG00000023105	chd1	72	94.965	Amphiprion_ocellaris
ENSAPOG00000005764	chd1	98	96.531	ENSAPEG00000013544	chd1	72	96.531	Amphiprion_percula
ENSAPOG00000005764	chd1	98	92.987	ENSATEG00000010676	chd1	70	93.086	Anabas_testudineus
ENSAPOG00000005764	chd1	96	89.302	ENSAMXG00000010843	chd1	87	89.302	Astyanax_mexicanus
ENSAPOG00000005764	chd1	97	82.971	ENSCATG00000032035	CHD1	68	82.627	Cercocebus_atys
ENSAPOG00000005764	chd1	97	82.971	ENSCSAG00000015339	CHD1	67	82.627	Chlorocebus_sabaeus
ENSAPOG00000005764	chd1	69	80.074	ENSCPBG00000015831	CHD1	78	79.877	Chrysemys_picta_bellii
ENSAPOG00000005764	chd1	97	79.670	ENSCANG00000036916	CHD1	67	79.654	Colobus_angolensis_palliatus
ENSAPOG00000005764	chd1	97	82.537	ENSCGRG00001023943	Chd1	67	82.338	Cricetulus_griseus_chok1gshd
ENSAPOG00000005764	chd1	97	82.537	ENSCGRG00000008652	Chd1	67	82.338	Cricetulus_griseus_crigri
ENSAPOG00000005764	chd1	96	91.873	ENSCSEG00000009553	chd1	72	91.873	Cynoglossus_semilaevis
ENSAPOG00000005764	chd1	97	82.812	ENSEASG00005016110	CHD1	82	82.541	Equus_asinus_asinus
ENSAPOG00000005764	chd1	96	89.488	ENSELUG00000017677	chd1	69	89.567	Esox_lucius
ENSAPOG00000005764	chd1	96	92.335	ENSFHEG00000021164	chd1	83	92.335	Fundulus_heteroclitus
ENSAPOG00000005764	chd1	96	90.445	ENSGMOG00000001537	chd1	68	88.230	Gadus_morhua
ENSAPOG00000005764	chd1	98	81.889	ENSGALG00000031327	-	70	81.889	Gallus_gallus
ENSAPOG00000005764	chd1	91	92.401	ENSGAFG00000019880	chd1	73	94.523	Gambusia_affinis
ENSAPOG00000005764	chd1	97	78.250	ENSGGOG00000011463	CHD1	67	78.201	Gorilla_gorilla
ENSAPOG00000005764	chd1	97	91.565	ENSHCOG00000014222	chd1	71	91.580	Hippocampus_comes
ENSAPOG00000005764	chd1	96	90.363	ENSIPUG00000001369	chd1	72	89.072	Ictalurus_punctatus
ENSAPOG00000005764	chd1	69	83.641	ENSLAFG00000023183	CHD1	76	83.150	Loxodonta_africana
ENSAPOG00000005764	chd1	97	82.971	ENSMFAG00000031226	CHD1	68	82.627	Macaca_fascicularis
ENSAPOG00000005764	chd1	97	82.986	ENSMMUG00000014090	CHD1	80	82.714	Macaca_mulatta
ENSAPOG00000005764	chd1	97	82.971	ENSMNEG00000045073	CHD1	68	82.627	Macaca_nemestrina
ENSAPOG00000005764	chd1	97	77.237	ENSMLEG00000041096	CHD1	66	76.923	Mandrillus_leucophaeus
ENSAPOG00000005764	chd1	98	92.752	ENSMZEG00005010957	chd1	87	92.513	Maylandia_zebra
ENSAPOG00000005764	chd1	92	84.750	ENSMOCG00000019121	Chd1	65	83.514	Microtus_ochrogaster
ENSAPOG00000005764	chd1	55	85.358	ENSMODG00000019266	-	84	85.093	Monodelphis_domestica
ENSAPOG00000005764	chd1	98	93.133	ENSMALG00000013317	chd1	81	93.133	Monopterus_albus
ENSAPOG00000005764	chd1	96	83.084	MGP_CAROLIEiJ_G0021099	Chd1	73	86.918	Mus_caroli
ENSAPOG00000005764	chd1	96	83.172	ENSMUSG00000023852	Chd1	73	86.792	Mus_musculus
ENSAPOG00000005764	chd1	98	82.078	MGP_PahariEiJ_G0023414	Chd1	75	85.294	Mus_pahari
ENSAPOG00000005764	chd1	94	95.086	ENSNBRG00000006860	chd1	69	95.086	Neolamprologus_brichardi
ENSAPOG00000005764	chd1	97	82.971	ENSNLEG00000014493	CHD1	67	82.627	Nomascus_leucogenys
ENSAPOG00000005764	chd1	98	82.756	ENSOANG00000004891	CHD1	75	84.523	Ornithorhynchus_anatinus
ENSAPOG00000005764	chd1	68	91.321	ENSORLG00015016725	chd1	76	88.835	Oryzias_latipes_hsok
ENSAPOG00000005764	chd1	97	81.520	ENSPPAG00000043367	CHD1	68	81.100	Pan_paniscus
ENSAPOG00000005764	chd1	97	82.884	ENSPTRG00000017103	CHD1	67	82.684	Pan_troglodytes
ENSAPOG00000005764	chd1	97	82.971	ENSPANG00000006387	CHD1	68	82.627	Papio_anubis
ENSAPOG00000005764	chd1	86	88.813	ENSPKIG00000024719	chd1	64	89.205	Paramormyrops_kingsleyae
ENSAPOG00000005764	chd1	96	92.458	ENSPMGG00000005785	chd1	85	92.458	Periophthalmus_magnuspinnatus
ENSAPOG00000005764	chd1	97	82.537	ENSPEMG00000015939	Chd1	67	82.195	Peromyscus_maniculatus_bairdii
ENSAPOG00000005764	chd1	53	93.910	ENSPLAG00000006473	-	64	93.910	Poecilia_latipinna
ENSAPOG00000005764	chd1	96	91.996	ENSPREG00000004209	chd1	68	91.996	Poecilia_reticulata
ENSAPOG00000005764	chd1	98	82.297	ENSRNOG00000014434	Chd1	81	82.297	Rattus_norvegicus
ENSAPOG00000005764	chd1	94	84.335	ENSRBIG00000044325	CHD1	66	83.967	Rhinopithecus_bieti
ENSAPOG00000005764	chd1	97	83.058	ENSRROG00000001726	CHD1	68	82.714	Rhinopithecus_roxellana
ENSAPOG00000005764	chd1	96	87.379	ENSSFOG00015007161	chd1	83	87.975	Scleropages_formosus
ENSAPOG00000005764	chd1	98	94.057	ENSSDUG00000018314	chd1	81	94.057	Seriola_dumerili
ENSAPOG00000005764	chd1	69	95.056	ENSSLDG00000017244	chd1	80	95.056	Seriola_lalandi_dorsalis
ENSAPOG00000005764	chd1	98	95.678	ENSSPAG00000007024	chd1	81	95.678	Stegastes_partitus
ENSAPOG00000005764	chd1	97	83.232	ENSSSCG00000014177	CHD1	78	83.030	Sus_scrofa
ENSAPOG00000005764	chd1	98	88.448	ENSTRUG00000010282	chd1	68	88.966	Takifugu_rubripes
ENSAPOG00000005764	chd1	89	91.321	ENSTNIG00000007101	chd1	80	91.225	Tetraodon_nigroviridis
ENSAPOG00000005764	chd1	96	88.564	ENSXCOG00000017184	chd1	68	88.564	Xiphophorus_couchianus
ENSAPOG00000005764	chd1	94	92.650	ENSXMAG00000014538	chd1	81	92.650	Xiphophorus_maculatus