EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000006552 (Gene tree)
Gene ID: 110962292
Gene Symbol: polr2a
Alias: im:7136071
Full Name: DNA-directed RNA polymerase II subunit RPB1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 13249 bases
Position: chrMVNR01001005.1:237144-250392
Accession: 110962292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000004916	RNA_pol_Rpb1_5	PF04998.17	2.6e-101	1	1
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	1	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	2	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	3	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	4	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	5	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	6	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	7	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	8	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	9	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	10	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	11	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	12	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	13	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	14	15
ENSAPOP00000004916	RNA_pol_Rpb1_R	PF05001.13	1.4e-08	15	15
ENSAPOP00000004916	RNA_pol_Rpb1_4	PF05000.17	1.3e-37	1	1
ENSAPOP00000004916	RNA_pol_Rpb1_2	PF00623.20	6.3e-75	1	1
ENSAPOP00000004916	RNA_pol_Rpb1_3	PF04983.18	3.1e-50	1	1
ENSAPOP00000004916	RNA_pol_Rpb1_1	PF04997.12	6.2e-109	1	1
ENSAPOP00000004916	RNA_pol_Rpb1_7	PF04990.12	6.7e-55	1	1
ENSAPOP00000004916	RNA_pol_Rpb1_6	PF04992.14	3.1e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000009221	-	8562	XM_022210219	ENSAPOP00000004916	1972 (aa)	XP_022065911	-

Gene Model

Click here to download ENSAPOG00000006552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000006552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000006552	polr2a	91	94.114	ENSAMEG00000016265	-	82	94.121	Ailuropoda_melanoleuca
ENSAPOG00000006552	polr2a	90	95.844	ENSACIG00000015982	polr2a	82	96.464	Amphilophus_citrinellus
ENSAPOG00000006552	polr2a	100	98.077	ENSAOCG00000004255	polr2a	100	98.077	Amphiprion_ocellaris
ENSAPOG00000006552	polr2a	90	99.814	ENSAPEG00000012623	polr2a	87	99.814	Amphiprion_percula
ENSAPOG00000006552	polr2a	90	98.883	ENSATEG00000019644	polr2a	87	98.883	Anabas_testudineus
ENSAPOG00000006552	polr2a	91	94.969	ENSACAG00000014561	POLR2A	82	94.975	Anolis_carolinensis
ENSAPOG00000006552	polr2a	91	94.475	ENSANAG00000020093	-	82	94.482	Aotus_nancymaae
ENSAPOG00000006552	polr2a	90	98.511	ENSACLG00000006735	polr2a	87	98.511	Astatotilapia_calliptera
ENSAPOG00000006552	polr2a	90	97.643	ENSAMXG00000020046	polr2a	87	97.643	Astyanax_mexicanus
ENSAPOG00000006552	polr2a	91	94.475	ENSBTAG00000046765	POLR2A	82	94.482	Bos_taurus
ENSAPOG00000006552	polr2a	94	70.209	WBGene00000123	ama-1	92	69.908	Caenorhabditis_elegans
ENSAPOG00000006552	polr2a	91	94.413	ENSCAFG00000016532	POLR2A	90	94.420	Canis_familiaris
ENSAPOG00000006552	polr2a	91	93.548	ENSCAFG00020007929	-	82	93.556	Canis_lupus_dingo
ENSAPOG00000006552	polr2a	91	94.475	ENSCHIG00000027173	-	82	94.482	Capra_hircus
ENSAPOG00000006552	polr2a	96	93.863	ENSTSYG00000012803	-	91	91.832	Carlito_syrichta
ENSAPOG00000006552	polr2a	90	90.229	ENSCAPG00000001882	-	93	93.552	Cavia_aperea
ENSAPOG00000006552	polr2a	92	90.275	ENSCPOG00000014812	-	93	93.304	Cavia_porcellus
ENSAPOG00000006552	polr2a	91	94.475	ENSCCAG00000020938	-	82	94.482	Cebus_capucinus
ENSAPOG00000006552	polr2a	91	94.413	ENSCATG00000013680	-	82	94.420	Cercocebus_atys
ENSAPOG00000006552	polr2a	91	94.351	ENSCLAG00000012196	-	82	94.358	Chinchilla_lanigera
ENSAPOG00000006552	polr2a	91	85.626	ENSCSAG00000011644	-	82	85.644	Chlorocebus_sabaeus
ENSAPOG00000006552	polr2a	91	90.751	ENSCPBG00000012697	POLR2A	94	90.871	Chrysemys_picta_bellii
ENSAPOG00000006552	polr2a	84	77.035	ENSCING00000007884	-	94	77.599	Ciona_intestinalis
ENSAPOG00000006552	polr2a	88	79.630	ENSCSAVG00000008334	-	98	75.000	Ciona_savignyi
ENSAPOG00000006552	polr2a	91	93.731	ENSCANG00000010622	-	82	93.738	Colobus_angolensis_palliatus
ENSAPOG00000006552	polr2a	92	88.261	ENSCGRG00001003538	Polr2a	91	85.980	Cricetulus_griseus_chok1gshd
ENSAPOG00000006552	polr2a	82	90.859	ENSCGRG00000012105	Polr2a	85	90.870	Cricetulus_griseus_crigri
ENSAPOG00000006552	polr2a	90	97.519	ENSCSEG00000002635	polr2a	87	97.519	Cynoglossus_semilaevis
ENSAPOG00000006552	polr2a	90	98.511	ENSCVAG00000005156	polr2a	87	98.511	Cyprinodon_variegatus
ENSAPOG00000006552	polr2a	91	97.024	ENSDARG00000099966	polr2a	82	97.024	Danio_rerio
ENSAPOG00000006552	polr2a	91	91.106	ENSDNOG00000016482	-	82	91.117	Dasypus_novemcinctus
ENSAPOG00000006552	polr2a	91	94.475	ENSDORG00000008667	Polr2a	82	94.482	Dipodomys_ordii
ENSAPOG00000006552	polr2a	91	69.646	FBgn0003277	RpII215	85	75.217	Drosophila_melanogaster
ENSAPOG00000006552	polr2a	91	90.000	ENSETEG00000002540	-	79	91.096	Echinops_telfairi
ENSAPOG00000006552	polr2a	91	87.399	ENSEBUG00000013967	polr2a	86	87.383	Eptatretus_burgeri
ENSAPOG00000006552	polr2a	91	92.427	ENSEASG00005019114	-	89	92.436	Equus_asinus_asinus
ENSAPOG00000006552	polr2a	91	94.475	ENSECAG00000018485	POLR2A	82	94.482	Equus_caballus
ENSAPOG00000006552	polr2a	83	94.526	ENSEEUG00000001154	-	92	94.526	Erinaceus_europaeus
ENSAPOG00000006552	polr2a	90	92.540	ENSELUG00000014284	polr2a	84	93.218	Esox_lucius
ENSAPOG00000006552	polr2a	91	94.538	ENSFDAG00000008287	-	82	94.544	Fukomys_damarensis
ENSAPOG00000006552	polr2a	82	98.387	ENSFHEG00000001768	polr2a	84	98.387	Fundulus_heteroclitus
ENSAPOG00000006552	polr2a	91	93.193	ENSGMOG00000007725	polr2a	100	93.193	Gadus_morhua
ENSAPOG00000006552	polr2a	91	93.469	ENSGAFG00000005389	polr2a	99	93.896	Gambusia_affinis
ENSAPOG00000006552	polr2a	91	94.498	ENSGACG00000019366	polr2a	99	94.279	Gasterosteus_aculeatus
ENSAPOG00000006552	polr2a	91	92.384	ENSGGOG00000014800	-	96	93.096	Gorilla_gorilla
ENSAPOG00000006552	polr2a	86	98.511	ENSHBUG00000018937	polr2a	91	98.511	Haplochromis_burtoni
ENSAPOG00000006552	polr2a	91	94.538	ENSHGLG00000012381	POLR2A	82	94.544	Heterocephalus_glaber_female
ENSAPOG00000006552	polr2a	91	94.538	ENSHGLG00100014843	POLR2A	82	94.544	Heterocephalus_glaber_male
ENSAPOG00000006552	polr2a	89	97.829	ENSHCOG00000011874	polr2a	82	97.829	Hippocampus_comes
ENSAPOG00000006552	polr2a	90	97.022	ENSIPUG00000002613	Polr2a	87	97.022	Ictalurus_punctatus
ENSAPOG00000006552	polr2a	91	94.475	ENSSTOG00000001304	-	82	94.482	Ictidomys_tridecemlineatus
ENSAPOG00000006552	polr2a	91	94.475	ENSJJAG00000013049	Polr2a	88	91.450	Jaculus_jaculus
ENSAPOG00000006552	polr2a	80	88.609	ENSKMAG00000016343	polr2a	85	77.964	Kryptolebias_marmoratus
ENSAPOG00000006552	polr2a	90	98.697	ENSLBEG00000027652	polr2a	87	98.697	Labrus_bergylta
ENSAPOG00000006552	polr2a	90	85.705	ENSLACG00000012071	POLR2A	81	85.777	Latimeria_chalumnae
ENSAPOG00000006552	polr2a	89	97.164	ENSLOCG00000013863	polr2a	91	96.710	Lepisosteus_oculatus
ENSAPOG00000006552	polr2a	91	94.475	ENSLAFG00000008626	-	91	94.482	Loxodonta_africana
ENSAPOG00000006552	polr2a	50	93.258	ENSMFAG00000007042	-	99	93.258	Macaca_fascicularis
ENSAPOG00000006552	polr2a	91	94.413	ENSMMUG00000023620	-	83	94.420	Macaca_mulatta
ENSAPOG00000006552	polr2a	91	93.979	ENSMNEG00000040407	-	82	93.986	Macaca_nemestrina
ENSAPOG00000006552	polr2a	90	90.000	ENSMLEG00000030263	-	99	93.258	Mandrillus_leucophaeus
ENSAPOG00000006552	polr2a	90	98.697	ENSMAMG00000003351	polr2a	87	98.697	Mastacembelus_armatus
ENSAPOG00000006552	polr2a	90	98.511	ENSMZEG00005021429	polr2a	87	98.511	Maylandia_zebra
ENSAPOG00000006552	polr2a	50	94.292	ENSMAUG00000021055	-	99	94.292	Mesocricetus_auratus
ENSAPOG00000006552	polr2a	91	94.413	ENSMICG00000013372	-	98	93.756	Microcebus_murinus
ENSAPOG00000006552	polr2a	93	90.025	ENSMOCG00000018279	Polr2a	79	90.235	Microtus_ochrogaster
ENSAPOG00000006552	polr2a	82	98.449	ENSMMOG00000012515	polr2a	82	98.449	Mola_mola
ENSAPOG00000006552	polr2a	91	94.165	ENSMODG00000007009	-	82	94.172	Monodelphis_domestica
ENSAPOG00000006552	polr2a	91	95.849	ENSMALG00000008716	polr2a	86	96.464	Monopterus_albus
ENSAPOG00000006552	polr2a	92	94.475	MGP_CAROLIEiJ_G0016587	Polr2a	88	94.482	Mus_caroli
ENSAPOG00000006552	polr2a	92	94.475	ENSMUSG00000005198	Polr2a	88	94.482	Mus_musculus
ENSAPOG00000006552	polr2a	91	92.336	MGP_PahariEiJ_G0017718	Polr2a	82	92.346	Mus_pahari
ENSAPOG00000006552	polr2a	92	94.475	MGP_SPRETEiJ_G0017423	Polr2a	88	94.482	Mus_spretus
ENSAPOG00000006552	polr2a	91	94.475	ENSMPUG00000009648	-	82	94.482	Mustela_putorius_furo
ENSAPOG00000006552	polr2a	91	93.862	ENSMLUG00000009088	-	82	93.870	Myotis_lucifugus
ENSAPOG00000006552	polr2a	91	94.475	ENSNGAG00000002543	Polr2a	82	94.482	Nannospalax_galili
ENSAPOG00000006552	polr2a	90	95.782	ENSNBRG00000002005	polr2a	82	96.340	Neolamprologus_brichardi
ENSAPOG00000006552	polr2a	92	92.055	ENSNLEG00000009460	-	82	93.012	Nomascus_leucogenys
ENSAPOG00000006552	polr2a	85	95.425	ENSMEUG00000008611	-	91	86.775	Notamacropus_eugenii
ENSAPOG00000006552	polr2a	80	94.188	ENSOPRG00000015116	-	99	94.188	Ochotona_princeps
ENSAPOG00000006552	polr2a	90	94.522	ENSODEG00000017674	-	91	90.080	Octodon_degus
ENSAPOG00000006552	polr2a	90	98.821	ENSONIG00000009231	polr2a	87	98.821	Oreochromis_niloticus
ENSAPOG00000006552	polr2a	91	93.256	ENSOCUG00000017929	-	93	94.358	Oryctolagus_cuniculus
ENSAPOG00000006552	polr2a	90	98.263	ENSORLG00000006431	polr2a	87	98.263	Oryzias_latipes
ENSAPOG00000006552	polr2a	90	98.263	ENSORLG00020010235	polr2a	87	98.263	Oryzias_latipes_hni
ENSAPOG00000006552	polr2a	90	98.139	ENSORLG00015007075	polr2a	87	98.139	Oryzias_latipes_hsok
ENSAPOG00000006552	polr2a	91	98.320	ENSOMEG00000010713	polr2a	100	98.320	Oryzias_melastigma
ENSAPOG00000006552	polr2a	91	94.475	ENSOGAG00000033608	-	82	94.482	Otolemur_garnettii
ENSAPOG00000006552	polr2a	82	94.475	ENSOARG00000013874	-	85	94.482	Ovis_aries
ENSAPOG00000006552	polr2a	92	91.943	ENSPPAG00000043734	-	82	91.940	Pan_paniscus
ENSAPOG00000006552	polr2a	92	92.055	ENSPTRG00000008691	POLR2A	82	93.012	Pan_troglodytes
ENSAPOG00000006552	polr2a	91	93.731	ENSPANG00000024099	-	82	93.738	Papio_anubis
ENSAPOG00000006552	polr2a	81	96.026	ENSPKIG00000005727	polr2a	85	96.026	Paramormyrops_kingsleyae
ENSAPOG00000006552	polr2a	91	92.831	ENSPSIG00000014006	POLR2A	98	92.751	Pelodiscus_sinensis
ENSAPOG00000006552	polr2a	91	97.991	ENSPMGG00000019734	polr2a	99	97.991	Periophthalmus_magnuspinnatus
ENSAPOG00000006552	polr2a	91	94.475	ENSPEMG00000012521	Polr2a	82	94.482	Peromyscus_maniculatus_bairdii
ENSAPOG00000006552	polr2a	99	94.169	ENSPCIG00000028851	-	82	94.169	Phascolarctos_cinereus
ENSAPOG00000006552	polr2a	88	98.573	ENSPFOG00000007890	polr2a	89	98.573	Poecilia_formosa
ENSAPOG00000006552	polr2a	88	98.573	ENSPLAG00000007399	polr2a	89	98.573	Poecilia_latipinna
ENSAPOG00000006552	polr2a	88	98.573	ENSPMEG00000002071	polr2a	89	98.573	Poecilia_mexicana
ENSAPOG00000006552	polr2a	90	98.511	ENSPREG00000013122	polr2a	87	98.511	Poecilia_reticulata
ENSAPOG00000006552	polr2a	91	94.475	ENSPPYG00000007924	-	87	94.482	Pongo_abelii
ENSAPOG00000006552	polr2a	83	95.395	ENSPCAG00000006951	-	74	95.395	Procavia_capensis
ENSAPOG00000006552	polr2a	91	93.173	ENSPCOG00000025260	-	82	93.182	Propithecus_coquereli
ENSAPOG00000006552	polr2a	91	94.165	ENSPVAG00000005069	-	82	94.172	Pteropus_vampyrus
ENSAPOG00000006552	polr2a	90	98.573	ENSPNYG00000022340	polr2a	87	98.573	Pundamilia_nyererei
ENSAPOG00000006552	polr2a	90	97.705	ENSPNAG00000011237	polr2a	87	97.705	Pygocentrus_nattereri
ENSAPOG00000006552	polr2a	91	94.413	ENSRNOG00000028834	Polr2a	82	94.420	Rattus_norvegicus
ENSAPOG00000006552	polr2a	92	91.993	ENSRBIG00000002471	-	83	94.048	Rhinopithecus_bieti
ENSAPOG00000006552	polr2a	92	94.413	ENSRROG00000029583	-	88	94.420	Rhinopithecus_roxellana
ENSAPOG00000006552	polr2a	83	49.848	YDL140C	RPO21	92	50.730	Saccharomyces_cerevisiae
ENSAPOG00000006552	polr2a	91	94.475	ENSSBOG00000000808	-	82	94.482	Saimiri_boliviensis_boliviensis
ENSAPOG00000006552	polr2a	90	94.165	ENSSHAG00000002858	-	84	94.172	Sarcophilus_harrisii
ENSAPOG00000006552	polr2a	90	97.208	ENSSFOG00015023275	polr2a	89	97.208	Scleropages_formosus
ENSAPOG00000006552	polr2a	90	98.387	ENSSMAG00000009137	polr2a	87	98.387	Scophthalmus_maximus
ENSAPOG00000006552	polr2a	90	99.132	ENSSDUG00000020466	polr2a	87	99.132	Seriola_dumerili
ENSAPOG00000006552	polr2a	90	99.069	ENSSLDG00000020613	polr2a	87	99.069	Seriola_lalandi_dorsalis
ENSAPOG00000006552	polr2a	91	90.072	ENSSARG00000005875	-	96	90.892	Sorex_araneus
ENSAPOG00000006552	polr2a	94	99.642	ENSSPAG00000016741	polr2a	94	99.642	Stegastes_partitus
ENSAPOG00000006552	polr2a	91	93.544	ENSSSCG00000028278	-	82	93.552	Sus_scrofa
ENSAPOG00000006552	polr2a	91	86.946	ENSTRUG00000012320	polr2a	78	90.812	Takifugu_rubripes
ENSAPOG00000006552	polr2a	90	96.203	ENSTNIG00000010136	polr2a	100	95.929	Tetraodon_nigroviridis
ENSAPOG00000006552	polr2a	68	94.087	ENSTBEG00000013294	-	53	94.087	Tupaia_belangeri
ENSAPOG00000006552	polr2a	91	92.800	ENSTTRG00000014273	-	82	92.808	Tursiops_truncatus
ENSAPOG00000006552	polr2a	88	94.056	ENSUAMG00000014866	-	88	94.063	Ursus_americanus
ENSAPOG00000006552	polr2a	84	91.620	ENSUMAG00000015732	-	79	91.620	Ursus_maritimus
ENSAPOG00000006552	polr2a	62	98.370	ENSVPAG00000008842	-	56	98.370	Vicugna_pacos
ENSAPOG00000006552	polr2a	92	94.413	ENSVVUG00000027878	-	87	94.420	Vulpes_vulpes
ENSAPOG00000006552	polr2a	92	94.273	ENSXETG00000012465	polr2a	91	94.280	Xenopus_tropicalis
ENSAPOG00000006552	polr2a	82	96.216	ENSXCOG00000001804	polr2a	99	95.691	Xiphophorus_couchianus
ENSAPOG00000006552	polr2a	90	98.511	ENSXMAG00000015687	polr2a	87	98.511	Xiphophorus_maculatus