EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000006736 (Gene tree)
Gene ID: -
Gene Symbol: fam83c
Alias: im:7149063
Full Name: family with sequence similarity 83%2C member C
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 16739 bases
Position: chrMVNR01003244.1:46282-63020
Accession: ZDB-GENE-120201-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000005054	FAM83	PF07894.12	4.9e-87	1	1
ENSAPOP00000005067	FAM83	PF07894.12	2.4e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000008984	-	1152	-	ENSAPOP00000005067	383 (aa)	-	-
ENSAPOT00000009000	-	1158	-	ENSAPOP00000005054	385 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000006736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000006736's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000006736	fam83c	60	30.380	ENSAPOG00000018052	fam83e	52	30.380

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000006736	fam83c	66	52.326	ENSACAG00000005517	FAM83C	92	43.605	Anolis_carolinensis
ENSAPOG00000006736	fam83c	64	50.195	ENSFALG00000012451	FAM83C	62	50.195	Ficedula_albicollis
ENSAPOG00000006736	fam83c	62	78.601	ENSGMOG00000003558	fam83c	73	78.601	Gadus_morhua
ENSAPOG00000006736	fam83c	62	72.500	ENSGACG00000000006	fam83c	70	72.500	Gasterosteus_aculeatus
ENSAPOG00000006736	fam83c	64	53.725	ENSGAGG00000011761	FAM83C	52	53.360	Gopherus_agassizii
ENSAPOG00000006736	fam83c	67	63.258	ENSLACG00000005534	FAM83C	50	63.258	Latimeria_chalumnae
ENSAPOG00000006736	fam83c	69	89.850	ENSONIG00000018564	fam83c	52	89.850	Oreochromis_niloticus
ENSAPOG00000006736	fam83c	55	87.442	ENSPNYG00000019386	fam83c	52	70.667	Pundamilia_nyererei
ENSAPOG00000006736	fam83c	64	89.474	ENSTNIG00000002833	fam83c	68	89.474	Tetraodon_nigroviridis
ENSAPOG00000006736	fam83c	69	54.182	ENSXETG00000019789	fam83c	68	54.182	Xenopus_tropicalis