EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000006904 (Gene tree)
Gene ID: 110962293
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 27119 bases
Position: chrMVNR01001005.1:139582-166700
Accession: 110962293
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	1	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	2	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	3	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	4	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	5	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	6	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	7	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	8	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	9	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	10	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	11	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	12	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	13	14
ENSAPOP00000024422	KH_1	PF00013.29	1.7e-186	14	14
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	1	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	2	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	3	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	4	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	5	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	6	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	7	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	8	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	9	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	10	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	11	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	12	13
ENSAPOP00000024413	KH_1	PF00013.29	5.3e-173	13	13

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000008782	-	4648	XM_022210220	ENSAPOP00000024422	1268 (aa)	XP_022065912	UPI000B8FD72D
ENSAPOT00000008810	-	3762	-	ENSAPOP00000024413	1253 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000006904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000006904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000006904	hdlbpb	100	71.875	ENSAPOG00000012609	hdlbpa	100	72.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000006904	hdlbpb	100	91.680	ENSACIG00000016154	hdlbpb	100	91.680	Amphilophus_citrinellus
ENSAPOG00000006904	hdlbpb	100	99.290	ENSAOCG00000004083	hdlbpb	100	99.290	Amphiprion_ocellaris
ENSAPOG00000006904	hdlbpb	100	99.211	ENSAPEG00000012270	hdlbpb	100	99.211	Amphiprion_percula
ENSAPOG00000006904	hdlbpb	100	96.924	ENSATEG00000019877	hdlbpb	100	96.924	Anabas_testudineus
ENSAPOG00000006904	hdlbpb	100	82.492	ENSACAG00000003606	-	100	82.492	Anolis_carolinensis
ENSAPOG00000006904	hdlbpb	100	97.397	ENSACLG00000006618	hdlbpb	100	97.397	Astatotilapia_calliptera
ENSAPOG00000006904	hdlbpb	100	77.970	ENSAMXG00000019946	hdlbpb	100	77.970	Astyanax_mexicanus
ENSAPOG00000006904	hdlbpb	100	96.293	ENSCSEG00000000955	hdlbpb	100	96.293	Cynoglossus_semilaevis
ENSAPOG00000006904	hdlbpb	100	95.662	ENSCVAG00000005345	hdlbpb	100	95.662	Cyprinodon_variegatus
ENSAPOG00000006904	hdlbpb	99	85.872	ENSDARG00000061864	hdlbpb	99	85.872	Danio_rerio
ENSAPOG00000006904	hdlbpb	92	70.427	ENSEBUG00000005304	hdlbpb	96	70.427	Eptatretus_burgeri
ENSAPOG00000006904	hdlbpb	100	78.571	ENSELUG00000019925	hdlbpb	100	78.728	Esox_lucius
ENSAPOG00000006904	hdlbpb	100	82.691	ENSFHEG00000001701	hdlbpb	100	90.615	Fundulus_heteroclitus
ENSAPOG00000006904	hdlbpb	95	88.310	ENSGMOG00000004522	hdlbpb	78	88.310	Gadus_morhua
ENSAPOG00000006904	hdlbpb	100	95.584	ENSGAFG00000005278	hdlbpb	100	95.584	Gambusia_affinis
ENSAPOG00000006904	hdlbpb	99	93.133	ENSGACG00000019361	hdlbpb	100	93.370	Gasterosteus_aculeatus
ENSAPOG00000006904	hdlbpb	100	97.240	ENSHBUG00000018434	hdlbpb	100	97.240	Haplochromis_burtoni
ENSAPOG00000006904	hdlbpb	100	85.433	ENSIPUG00000003291	HDLBP	100	85.789	Ictalurus_punctatus
ENSAPOG00000006904	hdlbpb	100	97.082	ENSKMAG00000016562	hdlbpb	100	97.082	Kryptolebias_marmoratus
ENSAPOG00000006904	hdlbpb	100	97.082	ENSLBEG00000027855	hdlbpb	100	97.082	Labrus_bergylta
ENSAPOG00000006904	hdlbpb	100	85.189	ENSLACG00000007661	hdlbpb	94	85.189	Latimeria_chalumnae
ENSAPOG00000006904	hdlbpb	100	83.452	ENSLOCG00000013909	hdlbpb	100	83.452	Lepisosteus_oculatus
ENSAPOG00000006904	hdlbpb	100	97.634	ENSMAMG00000003035	hdlbpb	100	97.634	Mastacembelus_armatus
ENSAPOG00000006904	hdlbpb	100	97.397	ENSMZEG00005021465	hdlbpb	100	97.397	Maylandia_zebra
ENSAPOG00000006904	hdlbpb	100	96.372	ENSMMOG00000012525	hdlbpb	100	96.372	Mola_mola
ENSAPOG00000006904	hdlbpb	100	95.662	ENSMALG00000008938	hdlbpb	100	95.662	Monopterus_albus
ENSAPOG00000006904	hdlbpb	100	97.319	ENSNBRG00000002236	hdlbpb	100	97.319	Neolamprologus_brichardi
ENSAPOG00000006904	hdlbpb	100	96.924	ENSONIG00000009211	hdlbpb	100	96.924	Oreochromis_niloticus
ENSAPOG00000006904	hdlbpb	100	95.347	ENSORLG00000006581	hdlbpb	100	95.347	Oryzias_latipes
ENSAPOG00000006904	hdlbpb	100	95.505	ENSORLG00020010012	hdlbpb	100	95.505	Oryzias_latipes_hni
ENSAPOG00000006904	hdlbpb	100	95.741	ENSORLG00015006863	hdlbpb	100	95.741	Oryzias_latipes_hsok
ENSAPOG00000006904	hdlbpb	100	95.584	ENSOMEG00000011131	hdlbpb	100	95.584	Oryzias_melastigma
ENSAPOG00000006904	hdlbpb	100	89.196	ENSPKIG00000005966	hdlbpb	100	89.196	Paramormyrops_kingsleyae
ENSAPOG00000006904	hdlbpb	86	92.778	ENSPMGG00000019853	hdlbpb	99	92.778	Periophthalmus_magnuspinnatus
ENSAPOG00000006904	hdlbpb	92	64.570	ENSPMAG00000000249	-	99	64.650	Petromyzon_marinus
ENSAPOG00000006904	hdlbpb	96	74.508	ENSPMAG00000002131	hdlbpb	100	74.671	Petromyzon_marinus
ENSAPOG00000006904	hdlbpb	100	94.930	ENSPFOG00000008755	hdlbpb	100	94.930	Poecilia_formosa
ENSAPOG00000006904	hdlbpb	100	95.978	ENSPLAG00000007055	hdlbpb	100	95.978	Poecilia_latipinna
ENSAPOG00000006904	hdlbpb	100	95.820	ENSPMEG00000001952	hdlbpb	100	95.820	Poecilia_mexicana
ENSAPOG00000006904	hdlbpb	100	95.978	ENSPREG00000012848	hdlbpb	100	95.978	Poecilia_reticulata
ENSAPOG00000006904	hdlbpb	100	97.240	ENSPNYG00000022467	hdlbpb	100	97.240	Pundamilia_nyererei
ENSAPOG00000006904	hdlbpb	100	88.091	ENSPNAG00000011104	hdlbpb	100	88.091	Pygocentrus_nattereri
ENSAPOG00000006904	hdlbpb	100	88.328	ENSSFOG00015023199	hdlbpb	100	88.328	Scleropages_formosus
ENSAPOG00000006904	hdlbpb	100	97.319	ENSSMAG00000008790	hdlbpb	100	97.319	Scophthalmus_maximus
ENSAPOG00000006904	hdlbpb	100	98.344	ENSSDUG00000020694	hdlbpb	100	98.344	Seriola_dumerili
ENSAPOG00000006904	hdlbpb	100	97.792	ENSSLDG00000020807	hdlbpb	100	97.792	Seriola_lalandi_dorsalis
ENSAPOG00000006904	hdlbpb	100	83.281	ENSSPUG00000018688	-	100	83.281	Sphenodon_punctatus
ENSAPOG00000006904	hdlbpb	100	98.896	ENSSPAG00000016969	hdlbpb	100	98.896	Stegastes_partitus
ENSAPOG00000006904	hdlbpb	98	92.874	ENSTRUG00000012888	hdlbpb	99	92.874	Takifugu_rubripes
ENSAPOG00000006904	hdlbpb	99	94.049	ENSTNIG00000002555	hdlbpb	100	94.049	Tetraodon_nigroviridis
ENSAPOG00000006904	hdlbpb	100	83.990	ENSXCOG00000001797	hdlbpb	100	83.990	Xiphophorus_couchianus
ENSAPOG00000006904	hdlbpb	100	95.189	ENSXMAG00000015633	hdlbpb	100	95.189	Xiphophorus_maculatus