EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000007490 (Gene tree)
Gene ID: 110962271
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 36474 bases
Position: chrMVNR01001002.1:195878-232351
Accession: 110962271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000024823	Nop52	PF05997.12	9.1e-64	1	1
ENSAPOP00000024804	Nop52	PF05997.12	1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000007834	-	4298	-	ENSAPOP00000024823	885 (aa)	-	-
ENSAPOT00000007818	-	3837	XM_022210191	ENSAPOP00000024804	948 (aa)	XP_022065883	UPI000B901D37

Gene Model

Click here to download ENSAPOG00000007490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000007490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000007490	-	53	46.594	ENSG00000160208	RRP1B	64	48.438	Homo_sapiens
ENSAPOG00000007490	-	99	90.713	ENSAOCG00000017894	-	100	96.809	Amphiprion_ocellaris
ENSAPOG00000007490	-	100	90.461	ENSAPEG00000024150	-	100	89.832	Amphiprion_percula
ENSAPOG00000007490	-	100	53.558	ENSATEG00000005045	-	100	53.410	Anabas_testudineus
ENSAPOG00000007490	-	50	50.418	ENSACAG00000017851	RRP1B	61	49.863	Anolis_carolinensis
ENSAPOG00000007490	-	50	48.438	ENSANAG00000034889	RRP1B	64	48.438	Aotus_nancymaae
ENSAPOG00000007490	-	53	47.097	ENSBTAG00000017418	RRP1B	66	49.206	Bos_taurus
ENSAPOG00000007490	-	55	45.504	ENSCJAG00000017077	RRP1B	64	48.819	Callithrix_jacchus
ENSAPOG00000007490	-	50	48.031	ENSCAFG00020018901	RRP1B	67	48.819	Canis_lupus_dingo
ENSAPOG00000007490	-	53	49.045	ENSCHIG00000021519	RRP1B	66	50.781	Capra_hircus
ENSAPOG00000007490	-	50	50.781	ENSCCAG00000029384	RRP1B	64	50.781	Cebus_capucinus
ENSAPOG00000007490	-	53	46.049	ENSCATG00000017423	RRP1B	64	49.219	Cercocebus_atys
ENSAPOG00000007490	-	55	46.322	ENSCSAG00000007961	RRP1B	64	50.394	Chlorocebus_sabaeus
ENSAPOG00000007490	-	54	51.695	ENSCPBG00000010310	RRP1B	64	51.821	Chrysemys_picta_bellii
ENSAPOG00000007490	-	55	46.322	ENSCANG00000040952	RRP1B	64	48.485	Colobus_angolensis_palliatus
ENSAPOG00000007490	-	51	46.575	ENSCGRG00001010889	-	64	49.219	Cricetulus_griseus_chok1gshd
ENSAPOG00000007490	-	51	46.575	ENSCGRG00001023882	-	60	57.353	Cricetulus_griseus_chok1gshd
ENSAPOG00000007490	-	65	63.462	ENSCSEG00000020711	-	83	65.873	Cynoglossus_semilaevis
ENSAPOG00000007490	-	53	44.865	ENSDNOG00000032774	RRP1B	64	45.312	Dasypus_novemcinctus
ENSAPOG00000007490	-	50	49.219	ENSEASG00005001687	RRP1B	64	51.163	Equus_asinus_asinus
ENSAPOG00000007490	-	50	46.875	ENSECAG00000018018	RRP1B	64	51.163	Equus_caballus
ENSAPOG00000007490	-	50	45.736	ENSFCAG00000010272	RRP1B	66	47.287	Felis_catus
ENSAPOG00000007490	-	51	47.387	ENSFALG00000002024	RRP1B	60	47.157	Ficedula_albicollis
ENSAPOG00000007490	-	96	48.943	ENSFHEG00000016314	-	98	68.317	Fundulus_heteroclitus
ENSAPOG00000007490	-	57	67.143	ENSGMOG00000001953	-	71	66.571	Gadus_morhua
ENSAPOG00000007490	-	55	48.187	ENSGALG00000035696	RRP1B	59	52.632	Gallus_gallus
ENSAPOG00000007490	-	61	69.681	ENSGACG00000001438	rrp1	86	61.659	Gasterosteus_aculeatus
ENSAPOG00000007490	-	57	51.966	ENSGAGG00000000375	RRP1B	68	51.541	Gopherus_agassizii
ENSAPOG00000007490	-	55	46.594	ENSGGOG00000012069	RRP1B	64	48.438	Gorilla_gorilla
ENSAPOG00000007490	-	56	67.018	ENSHBUG00000003766	-	60	66.756	Haplochromis_burtoni
ENSAPOG00000007490	-	50	45.669	ENSHGLG00000004968	RRP1B	66	45.669	Heterocephalus_glaber_female
ENSAPOG00000007490	-	62	60.880	ENSHCOG00000018388	-	71	61.235	Hippocampus_comes
ENSAPOG00000007490	-	51	45.143	ENSSTOG00000011790	RRP1B	64	44.142	Ictidomys_tridecemlineatus
ENSAPOG00000007490	-	63	65.796	ENSKMAG00000005539	rrp1	89	65.789	Kryptolebias_marmoratus
ENSAPOG00000007490	-	53	46.405	ENSMFAG00000039152	RRP1B	64	50.000	Macaca_fascicularis
ENSAPOG00000007490	-	53	46.322	ENSMNEG00000034269	RRP1B	64	49.219	Macaca_nemestrina
ENSAPOG00000007490	-	100	54.371	ENSMAMG00000007131	-	100	54.294	Mastacembelus_armatus
ENSAPOG00000007490	-	55	48.366	ENSMGAG00000014591	RRP1B	60	51.579	Meleagris_gallopavo
ENSAPOG00000007490	-	58	47.011	ENSMICG00000004686	RRP1B	66	48.438	Microcebus_murinus
ENSAPOG00000007490	-	53	43.605	MGP_CAROLIEiJ_G0021376	Rrp1b	64	50.394	Mus_caroli
ENSAPOG00000007490	-	52	43.939	ENSMUSG00000058392	Rrp1b	58	55.882	Mus_musculus
ENSAPOG00000007490	-	54	43.353	MGP_PahariEiJ_G0023695	Rrp1b	64	50.000	Mus_pahari
ENSAPOG00000007490	-	53	43.678	MGP_SPRETEiJ_G0022290	Rrp1b	66	49.606	Mus_spretus
ENSAPOG00000007490	-	51	46.715	ENSMLUG00000007738	RRP1B	63	47.200	Myotis_lucifugus
ENSAPOG00000007490	-	53	46.067	ENSNGAG00000021073	Rrp1b	68	44.444	Nannospalax_galili
ENSAPOG00000007490	-	55	46.322	ENSNLEG00000001490	RRP1B	67	48.438	Nomascus_leucogenys
ENSAPOG00000007490	-	93	61.224	ENSORLG00020007199	-	56	68.280	Oryzias_latipes_hni
ENSAPOG00000007490	-	64	67.519	ENSOMEG00000016910	-	69	69.972	Oryzias_melastigma
ENSAPOG00000007490	-	50	45.736	ENSPPRG00000010356	RRP1B	66	47.287	Panthera_pardus
ENSAPOG00000007490	-	50	42.415	ENSPTIG00000016894	RRP1B	74	47.287	Panthera_tigris_altaica
ENSAPOG00000007490	-	53	46.594	ENSPTRG00000013958	RRP1B	64	47.656	Pan_troglodytes
ENSAPOG00000007490	-	53	46.322	ENSPANG00000011090	RRP1B	64	50.000	Papio_anubis
ENSAPOG00000007490	-	52	56.915	ENSPKIG00000003422	-	59	57.895	Paramormyrops_kingsleyae
ENSAPOG00000007490	-	51	51.648	ENSPSIG00000008152	RRP1B	60	51.821	Pelodiscus_sinensis
ENSAPOG00000007490	-	53	46.012	ENSPEMG00000022490	Rrp1b	64	51.562	Peromyscus_maniculatus_bairdii
ENSAPOG00000007490	-	55	48.352	ENSPCIG00000015513	RRP1B	64	54.545	Phascolarctos_cinereus
ENSAPOG00000007490	-	58	69.210	ENSPFOG00000007424	-	69	68.937	Poecilia_formosa
ENSAPOG00000007490	-	63	65.686	ENSPMEG00000007042	-	65	69.972	Poecilia_mexicana
ENSAPOG00000007490	-	65	65.686	ENSPREG00000015673	-	66	71.350	Poecilia_reticulata
ENSAPOG00000007490	-	55	46.594	ENSPPYG00000011470	RRP1B	64	48.438	Pongo_abelii
ENSAPOG00000007490	-	58	46.505	ENSPCOG00000017927	RRP1B	66	48.438	Propithecus_coquereli
ENSAPOG00000007490	-	53	41.830	ENSPVAG00000001436	RRP1B	63	45.113	Pteropus_vampyrus
ENSAPOG00000007490	-	55	43.678	ENSRBIG00000041689	RRP1B	63	50.781	Rhinopithecus_bieti
ENSAPOG00000007490	-	55	46.322	ENSRROG00000031499	RRP1B	64	50.781	Rhinopithecus_roxellana
ENSAPOG00000007490	-	50	53.892	ENSSFOG00015003932	-	60	59.848	Scleropages_formosus
ENSAPOG00000007490	-	100	54.398	ENSSMAG00000016847	-	88	73.497	Scophthalmus_maximus
ENSAPOG00000007490	-	100	57.298	ENSSDUG00000000551	-	100	57.588	Seriola_dumerili
ENSAPOG00000007490	-	100	57.396	ENSSLDG00000002538	-	100	57.600	Seriola_lalandi_dorsalis
ENSAPOG00000007490	-	51	48.864	ENSSPUG00000002834	RRP1B	62	47.922	Sphenodon_punctatus
ENSAPOG00000007490	-	100	74.723	ENSSPAG00000005370	-	100	74.723	Stegastes_partitus
ENSAPOG00000007490	-	50	47.692	ENSSSCG00000021698	RRP1B	65	55.435	Sus_scrofa
ENSAPOG00000007490	-	53	60.287	ENSTNIG00000005053	rrp1	70	68.481	Tetraodon_nigroviridis
ENSAPOG00000007490	-	50	45.736	ENSTTRG00000000723	RRP1B	66	45.736	Tursiops_truncatus
ENSAPOG00000007490	-	50	49.219	ENSUAMG00000026765	RRP1B	71	48.485	Ursus_americanus
ENSAPOG00000007490	-	56	43.034	ENSUMAG00000025510	RRP1B	84	48.800	Ursus_maritimus
ENSAPOG00000007490	-	50	46.479	ENSXETG00000013683	rrp1b	70	46.087	Xenopus_tropicalis
ENSAPOG00000007490	-	65	63.869	ENSXMAG00000023123	-	76	68.367	Xiphophorus_maculatus