EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000008360 (Gene tree)
Gene ID: 110948155
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF53.1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 7796 bases
Position: chrMVNR01000066.1:53568-61363
Accession: 110948155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000006519	zf-C2H2	PF00096.26	5.8e-21	1	3
ENSAPOP00000006519	zf-C2H2	PF00096.26	5.8e-21	2	3
ENSAPOP00000006519	zf-C2H2	PF00096.26	5.8e-21	3	3
ENSAPOP00000006519	zf-met	PF12874.7	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000006510	-	2794	XM_022189567	ENSAPOP00000006519	426 (aa)	XP_022045259	UPI000B90A105

Gene Model

Click here to download ENSAPOG00000008360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000008360's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000008360	-	53	41.228	ENSAPOG00000019960	-	92	42.169
ENSAPOG00000008360	-	73	49.091	ENSAPOG00000019138	-	76	49.091
ENSAPOG00000008360	-	52	49.206	ENSAPOG00000018480	-	61	49.206
ENSAPOG00000008360	-	51	47.664	ENSAPOG00000001054	-	92	52.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000008360	-	100	94.159	ENSAOCG00000010567	-	100	94.159	Amphiprion_ocellaris
ENSAPOG00000008360	-	96	44.954	ENSAOCG00000016409	-	60	44.954	Amphiprion_ocellaris
ENSAPOG00000008360	-	100	94.159	ENSAPEG00000012300	-	100	94.159	Amphiprion_percula
ENSAPOG00000008360	-	96	44.954	ENSAPEG00000008746	-	60	44.954	Amphiprion_percula
ENSAPOG00000008360	-	99	61.860	ENSCVAG00000021152	-	99	62.937	Cyprinodon_variegatus
ENSAPOG00000008360	-	97	45.614	ENSELUG00000004677	-	60	45.614	Esox_lucius
ENSAPOG00000008360	-	100	62.877	ENSFHEG00000014608	-	100	62.877	Fundulus_heteroclitus
ENSAPOG00000008360	-	96	57.407	ENSGAFG00000021013	-	94	57.407	Gambusia_affinis
ENSAPOG00000008360	-	96	44.037	ENSIPUG00000022266	ZNF135	61	45.614	Ictalurus_punctatus
ENSAPOG00000008360	-	100	72.028	ENSKMAG00000012097	-	100	72.028	Kryptolebias_marmoratus
ENSAPOG00000008360	-	97	38.043	ENSLBEG00000026060	-	98	38.043	Labrus_bergylta
ENSAPOG00000008360	-	97	46.667	ENSPLAG00000013745	-	84	50.000	Poecilia_latipinna
ENSAPOG00000008360	-	97	48.148	ENSPREG00000021124	-	96	48.148	Poecilia_reticulata
ENSAPOG00000008360	-	97	30.476	ENSPNAG00000025882	-	63	47.368	Pygocentrus_nattereri
ENSAPOG00000008360	-	55	45.614	ENSSFOG00015006083	-	59	45.614	Scleropages_formosus
ENSAPOG00000008360	-	61	50.685	ENSSMAG00000013663	-	92	46.988	Scophthalmus_maximus
ENSAPOG00000008360	-	96	48.182	ENSSLDG00000021278	-	59	48.182	Seriola_lalandi_dorsalis
ENSAPOG00000008360	-	100	90.164	ENSSPAG00000018010	-	100	90.164	Stegastes_partitus
ENSAPOG00000008360	-	60	52.703	ENSSPAG00000008950	-	69	52.703	Stegastes_partitus