EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000008542 (Gene tree)
Gene ID: 110965776
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 3429 bases
Position: chrMVNR01001477.1:37872-41300
Accession: 110965776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000006663	RRM_1	PF00076.22	9.7e-34	1	2
ENSAPOP00000006663	RRM_1	PF00076.22	9.7e-34	2	2
ENSAPOP00000025439	RRM_1	PF00076.22	1.2e-33	1	2
ENSAPOP00000025439	RRM_1	PF00076.22	1.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000006251	-	894	XM_022214930	ENSAPOP00000025439	250 (aa)	XP_022070622	UPI000B90766B
ENSAPOT00000006268	-	708	-	ENSAPOP00000006663	235 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000008542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000008542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000008542	-	51	40.441	ENSAPOG00000016635	-	81	42.647
ENSAPOG00000008542	-	68	41.808	ENSAPOG00000017395	srsf5a	58	45.763
ENSAPOG00000008542	-	66	49.711	ENSAPOG00000008642	srsf5b	58	46.821
ENSAPOG00000008542	-	80	87.940	ENSAPOG00000002748	-	78	88.482
ENSAPOG00000008542	-	67	44.706	ENSAPOG00000023399	-	55	44.706
ENSAPOG00000008542	-	74	68.649	ENSAPOG00000013728	srsf9	73	69.663

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000008542	-	100	86.220	ENSG00000136450	SRSF1	100	90.769	Homo_sapiens
ENSAPOG00000008542	-	81	88.177	ENSAMEG00000002635	SRSF1	79	91.053	Ailuropoda_melanoleuca
ENSAPOG00000008542	-	80	87.940	ENSACIG00000008091	srsf1a	83	88.947	Amphilophus_citrinellus
ENSAPOG00000008542	-	80	88.442	ENSAOCG00000010671	-	83	89.005	Amphiprion_ocellaris
ENSAPOG00000008542	-	99	99.597	ENSAOCG00000000337	-	100	99.597	Amphiprion_ocellaris
ENSAPOG00000008542	-	100	99.600	ENSAPEG00000023352	-	99	99.600	Amphiprion_percula
ENSAPOG00000008542	-	80	88.442	ENSAPEG00000009915	-	83	89.005	Amphiprion_percula
ENSAPOG00000008542	-	80	88.442	ENSATEG00000022403	-	77	89.005	Anabas_testudineus
ENSAPOG00000008542	-	94	91.150	ENSATEG00000021567	-	81	93.814	Anabas_testudineus
ENSAPOG00000008542	-	81	87.685	ENSACAG00000005542	-	79	89.163	Anolis_carolinensis
ENSAPOG00000008542	-	100	86.220	ENSANAG00000020583	-	99	90.278	Aotus_nancymaae
ENSAPOG00000008542	-	81	70.157	ENSANAG00000025417	-	75	70.213	Aotus_nancymaae
ENSAPOG00000008542	-	94	87.500	ENSAMXG00000035996	srsf1a	79	93.000	Astyanax_mexicanus
ENSAPOG00000008542	-	56	78.710	ENSAMXG00000024373	-	72	75.484	Astyanax_mexicanus
ENSAPOG00000008542	-	100	86.220	ENSBTAG00000014766	SRSF1	79	91.133	Bos_taurus
ENSAPOG00000008542	-	81	83.168	ENSCJAG00000008111	-	88	84.236	Callithrix_jacchus
ENSAPOG00000008542	-	100	86.220	ENSCJAG00000041713	-	99	90.278	Callithrix_jacchus
ENSAPOG00000008542	-	100	86.220	ENSCAFG00000017430	SRSF1	78	91.133	Canis_familiaris
ENSAPOG00000008542	-	100	86.220	ENSCAFG00020025632	-	78	91.133	Canis_lupus_dingo
ENSAPOG00000008542	-	81	89.655	ENSCHIG00000010787	SRSF1	79	91.133	Capra_hircus
ENSAPOG00000008542	-	100	86.220	ENSTSYG00000013899	-	99	90.278	Carlito_syrichta
ENSAPOG00000008542	-	100	86.220	ENSCPOG00000032681	-	79	91.133	Cavia_porcellus
ENSAPOG00000008542	-	100	86.220	ENSCCAG00000029484	-	99	90.278	Cebus_capucinus
ENSAPOG00000008542	-	100	86.220	ENSCATG00000042294	-	99	90.278	Cercocebus_atys
ENSAPOG00000008542	-	100	86.220	ENSCLAG00000014707	-	79	91.133	Chinchilla_lanigera
ENSAPOG00000008542	-	100	85.433	ENSCSAG00000005642	-	78	90.148	Chlorocebus_sabaeus
ENSAPOG00000008542	-	81	89.655	ENSCHOG00000001899	SRSF1	79	91.133	Choloepus_hoffmanni
ENSAPOG00000008542	-	100	85.039	ENSCPBG00000009851	-	79	89.655	Chrysemys_picta_bellii
ENSAPOG00000008542	-	100	86.220	ENSCANG00000029726	-	99	90.278	Colobus_angolensis_palliatus
ENSAPOG00000008542	-	100	86.220	ENSCGRG00001000670	Srsf1	78	91.133	Cricetulus_griseus_chok1gshd
ENSAPOG00000008542	-	100	86.220	ENSCGRG00000005590	Srsf1	79	91.133	Cricetulus_griseus_crigri
ENSAPOG00000008542	-	81	89.623	ENSCSEG00000009973	-	81	89.623	Cynoglossus_semilaevis
ENSAPOG00000008542	-	80	90.452	ENSCSEG00000014272	-	81	90.270	Cynoglossus_semilaevis
ENSAPOG00000008542	-	80	92.965	ENSCVAG00000005458	-	91	91.979	Cyprinodon_variegatus
ENSAPOG00000008542	-	80	88.442	ENSCVAG00000018617	-	78	89.005	Cyprinodon_variegatus
ENSAPOG00000008542	-	80	90.686	ENSDARG00000057691	srsf1a	99	91.623	Danio_rerio
ENSAPOG00000008542	-	80	88.500	ENSDARG00000017843	srsf1b	79	90.000	Danio_rerio
ENSAPOG00000008542	-	100	86.220	ENSDNOG00000011737	-	78	91.133	Dasypus_novemcinctus
ENSAPOG00000008542	-	100	86.220	ENSDORG00000015082	Srsf1	79	91.133	Dipodomys_ordii
ENSAPOG00000008542	-	76	88.421	ENSETEG00000005349	-	63	89.130	Echinops_telfairi
ENSAPOG00000008542	-	100	86.220	ENSEASG00005002922	-	78	91.133	Equus_asinus_asinus
ENSAPOG00000008542	-	81	89.655	ENSECAG00000016654	SRSF1	79	91.133	Equus_caballus
ENSAPOG00000008542	-	76	89.474	ENSEEUG00000009255	-	63	90.217	Erinaceus_europaeus
ENSAPOG00000008542	-	80	87.000	ENSELUG00000021646	srsf1a	77	87.047	Esox_lucius
ENSAPOG00000008542	-	100	86.220	ENSFCAG00000002250	-	92	90.217	Felis_catus
ENSAPOG00000008542	-	80	91.228	ENSFALG00000005062	-	78	72.589	Ficedula_albicollis
ENSAPOG00000008542	-	100	86.220	ENSFDAG00000010646	-	79	91.133	Fukomys_damarensis
ENSAPOG00000008542	-	80	88.442	ENSFHEG00000003174	srsf1a	83	89.005	Fundulus_heteroclitus
ENSAPOG00000008542	-	91	89.815	ENSGMOG00000014787	-	80	90.811	Gadus_morhua
ENSAPOG00000008542	-	81	88.177	ENSGALG00000005525	SRSF1	79	89.655	Gallus_gallus
ENSAPOG00000008542	-	80	92.593	ENSGACG00000020621	srsf1b	80	92.593	Gasterosteus_aculeatus
ENSAPOG00000008542	-	100	85.039	ENSGAGG00000022965	-	78	89.655	Gopherus_agassizii
ENSAPOG00000008542	-	100	86.220	ENSGGOG00000004386	SRSF1	99	90.278	Gorilla_gorilla
ENSAPOG00000008542	-	80	87.940	ENSHBUG00000016788	srsf1a	80	88.947	Haplochromis_burtoni
ENSAPOG00000008542	-	68	89.412	ENSHGLG00000000669	-	76	91.176	Heterocephalus_glaber_female
ENSAPOG00000008542	-	68	89.412	ENSHGLG00000000600	-	76	91.176	Heterocephalus_glaber_female
ENSAPOG00000008542	-	100	86.220	ENSHGLG00100016906	-	79	91.133	Heterocephalus_glaber_male
ENSAPOG00000008542	-	80	87.940	ENSHCOG00000018918	srsf1a	77	87.940	Hippocampus_comes
ENSAPOG00000008542	-	81	88.177	ENSIPUG00000008750	srsf1b	80	89.286	Ictalurus_punctatus
ENSAPOG00000008542	-	80	92.462	ENSIPUG00000017039	srsf1a	79	92.462	Ictalurus_punctatus
ENSAPOG00000008542	-	100	86.220	ENSSTOG00000000243	-	92	90.217	Ictidomys_tridecemlineatus
ENSAPOG00000008542	-	100	86.220	ENSJJAG00000000102	-	79	91.133	Jaculus_jaculus
ENSAPOG00000008542	-	53	81.203	ENSJJAG00000014464	-	95	82.540	Jaculus_jaculus
ENSAPOG00000008542	-	80	88.442	ENSKMAG00000019232	srsf1a	78	88.542	Kryptolebias_marmoratus
ENSAPOG00000008542	-	94	86.809	ENSLBEG00000015294	-	80	88.177	Labrus_bergylta
ENSAPOG00000008542	-	80	87.437	ENSLBEG00000020864	-	83	87.958	Labrus_bergylta
ENSAPOG00000008542	-	80	87.500	ENSLACG00000014160	srsf1a	73	87.500	Latimeria_chalumnae
ENSAPOG00000008542	-	81	88.177	ENSLOCG00000005994	srsf1a	79	89.286	Lepisosteus_oculatus
ENSAPOG00000008542	-	80	92.021	ENSLAFG00000025743	SRSF1	79	91.133	Loxodonta_africana
ENSAPOG00000008542	-	100	86.220	ENSMFAG00000040003	-	99	90.278	Macaca_fascicularis
ENSAPOG00000008542	-	100	86.220	ENSMMUG00000004725	SRSF1	99	90.278	Macaca_mulatta
ENSAPOG00000008542	-	100	83.465	ENSMMUG00000003260	-	95	87.755	Macaca_mulatta
ENSAPOG00000008542	-	100	86.220	ENSMNEG00000027680	-	99	90.278	Macaca_nemestrina
ENSAPOG00000008542	-	100	83.071	ENSMNEG00000015983	-	78	87.685	Macaca_nemestrina
ENSAPOG00000008542	-	81	89.655	ENSMLEG00000040509	SRSF1	79	91.133	Mandrillus_leucophaeus
ENSAPOG00000008542	-	100	82.716	ENSMLEG00000015243	-	77	88.021	Mandrillus_leucophaeus
ENSAPOG00000008542	-	100	95.833	ENSMAMG00000019687	-	100	95.833	Mastacembelus_armatus
ENSAPOG00000008542	-	80	88.442	ENSMAMG00000018454	-	78	89.005	Mastacembelus_armatus
ENSAPOG00000008542	-	81	92.118	ENSMAMG00000019691	-	81	92.347	Mastacembelus_armatus
ENSAPOG00000008542	-	100	86.220	ENSMAUG00000021845	Srsf1	79	91.133	Mesocricetus_auratus
ENSAPOG00000008542	-	100	86.220	ENSMICG00000013639	-	99	90.278	Microcebus_murinus
ENSAPOG00000008542	-	100	86.220	ENSMOCG00000001996	Srsf1	79	91.133	Microtus_ochrogaster
ENSAPOG00000008542	-	80	86.935	ENSMMOG00000014354	srsf1a	83	87.435	Mola_mola
ENSAPOG00000008542	-	76	91.053	ENSMODG00000014781	-	63	89.474	Monodelphis_domestica
ENSAPOG00000008542	-	83	81.538	ENSMALG00000007763	-	79	85.106	Monopterus_albus
ENSAPOG00000008542	-	80	87.940	ENSMALG00000017129	-	75	89.005	Monopterus_albus
ENSAPOG00000008542	-	100	86.220	MGP_CAROLIEiJ_G0016943	Srsf1	92	90.217	Mus_caroli
ENSAPOG00000008542	-	100	86.220	ENSMUSG00000018379	Srsf1	92	90.217	Mus_musculus
ENSAPOG00000008542	-	100	86.220	MGP_PahariEiJ_G0018074	Srsf1	80	96.429	Mus_pahari
ENSAPOG00000008542	-	100	86.220	MGP_SPRETEiJ_G0017790	Srsf1	92	90.217	Mus_spretus
ENSAPOG00000008542	-	81	89.655	ENSMPUG00000015369	SRSF1	79	91.133	Mustela_putorius_furo
ENSAPOG00000008542	-	81	89.655	ENSMLUG00000011040	SRSF1	79	91.133	Myotis_lucifugus
ENSAPOG00000008542	-	83	85.279	ENSMLUG00000023995	-	79	88.482	Myotis_lucifugus
ENSAPOG00000008542	-	81	89.655	ENSNGAG00000011395	Srsf1	79	91.133	Nannospalax_galili
ENSAPOG00000008542	-	100	82.000	ENSNBRG00000008041	srsf1b	80	81.773	Neolamprologus_brichardi
ENSAPOG00000008542	-	100	86.220	ENSNLEG00000008088	-	99	90.278	Nomascus_leucogenys
ENSAPOG00000008542	-	53	86.364	ENSMEUG00000002783	-	100	84.848	Notamacropus_eugenii
ENSAPOG00000008542	-	55	89.130	ENSOPRG00000001234	-	72	91.304	Ochotona_princeps
ENSAPOG00000008542	-	99	86.166	ENSODEG00000011481	-	79	90.640	Octodon_degus
ENSAPOG00000008542	-	80	87.940	ENSONIG00000013160	-	77	88.947	Oreochromis_niloticus
ENSAPOG00000008542	-	96	90.795	ENSONIG00000004860	-	81	91.327	Oreochromis_niloticus
ENSAPOG00000008542	-	100	67.886	ENSOCUG00000010894	-	77	73.545	Oryctolagus_cuniculus
ENSAPOG00000008542	-	80	88.442	ENSORLG00000004580	srsf1a	78	89.005	Oryzias_latipes
ENSAPOG00000008542	-	80	88.442	ENSORLG00020009456	srsf1a	83	89.005	Oryzias_latipes_hni
ENSAPOG00000008542	-	80	88.442	ENSORLG00015014384	srsf1a	83	89.005	Oryzias_latipes_hsok
ENSAPOG00000008542	-	73	86.813	ENSOMEG00000004106	srsf1a	71	87.356	Oryzias_melastigma
ENSAPOG00000008542	-	86	90.187	ENSOGAG00000025950	-	79	91.133	Otolemur_garnettii
ENSAPOG00000008542	-	80	92.553	ENSOARG00000008323	SRSF1	78	92.553	Ovis_aries
ENSAPOG00000008542	-	100	86.220	ENSPPAG00000043403	-	99	90.278	Pan_paniscus
ENSAPOG00000008542	-	100	86.220	ENSPPRG00000004238	-	92	90.217	Panthera_pardus
ENSAPOG00000008542	-	100	86.220	ENSPTRG00000049077	SRSF1	99	90.278	Pan_troglodytes
ENSAPOG00000008542	-	100	71.429	ENSPANG00000030275	-	75	71.123	Papio_anubis
ENSAPOG00000008542	-	100	86.220	ENSPANG00000022305	-	99	90.278	Papio_anubis
ENSAPOG00000008542	-	81	88.177	ENSPKIG00000012857	srsf1b	80	89.796	Paramormyrops_kingsleyae
ENSAPOG00000008542	-	80	87.000	ENSPKIG00000007204	srsf1a	83	88.542	Paramormyrops_kingsleyae
ENSAPOG00000008542	-	81	81.463	ENSPSIG00000009000	-	80	82.927	Pelodiscus_sinensis
ENSAPOG00000008542	-	80	87.895	ENSPMGG00000005467	-	77	92.737	Periophthalmus_magnuspinnatus
ENSAPOG00000008542	-	78	90.761	ENSPMGG00000013112	-	82	90.761	Periophthalmus_magnuspinnatus
ENSAPOG00000008542	-	100	86.220	ENSPEMG00000021416	Srsf1	79	91.133	Peromyscus_maniculatus_bairdii
ENSAPOG00000008542	-	81	90.640	ENSPCIG00000006076	-	80	91.133	Phascolarctos_cinereus
ENSAPOG00000008542	-	81	92.118	ENSPFOG00000018325	-	70	92.462	Poecilia_formosa
ENSAPOG00000008542	-	81	92.118	ENSPLAG00000008416	srsf1b	79	92.462	Poecilia_latipinna
ENSAPOG00000008542	-	52	83.721	ENSPMEG00000014312	-	98	84.298	Poecilia_mexicana
ENSAPOG00000008542	-	81	92.118	ENSPMEG00000002388	-	79	92.462	Poecilia_mexicana
ENSAPOG00000008542	-	52	83.721	ENSPMEG00000020607	-	98	84.298	Poecilia_mexicana
ENSAPOG00000008542	-	80	88.442	ENSPREG00000009667	srsf1a	78	89.005	Poecilia_reticulata
ENSAPOG00000008542	-	100	86.220	ENSPPYG00000008240	SRSF1	79	91.133	Pongo_abelii
ENSAPOG00000008542	-	81	89.655	ENSPCAG00000005199	SRSF1	79	91.133	Procavia_capensis
ENSAPOG00000008542	-	82	75.122	ENSPCOG00000025736	-	95	73.267	Propithecus_coquereli
ENSAPOG00000008542	-	100	86.220	ENSPCOG00000023654	-	99	90.278	Propithecus_coquereli
ENSAPOG00000008542	-	57	98.571	ENSPVAG00000000519	-	54	98.571	Pteropus_vampyrus
ENSAPOG00000008542	-	94	85.714	ENSPNAG00000022241	srsf1a	78	90.576	Pygocentrus_nattereri
ENSAPOG00000008542	-	80	89.062	ENSPNAG00000014601	srsf1b	80	91.146	Pygocentrus_nattereri
ENSAPOG00000008542	-	81	89.655	ENSRNOG00000050323	Srsf1	79	91.133	Rattus_norvegicus
ENSAPOG00000008542	-	100	86.220	ENSRBIG00000034445	-	99	90.278	Rhinopithecus_bieti
ENSAPOG00000008542	-	100	86.220	ENSRROG00000041506	-	99	90.278	Rhinopithecus_roxellana
ENSAPOG00000008542	-	100	86.220	ENSSBOG00000025377	-	99	90.278	Saimiri_boliviensis_boliviensis
ENSAPOG00000008542	-	81	90.640	ENSSHAG00000002552	-	80	91.133	Sarcophilus_harrisii
ENSAPOG00000008542	-	81	89.109	ENSSFOG00015004800	srsf1a	79	89.691	Scleropages_formosus
ENSAPOG00000008542	-	81	93.137	ENSSMAG00000009719	-	80	93.137	Scophthalmus_maximus
ENSAPOG00000008542	-	80	86.935	ENSSMAG00000007018	-	78	87.435	Scophthalmus_maximus
ENSAPOG00000008542	-	80	87.437	ENSSDUG00000011303	-	83	87.958	Seriola_dumerili
ENSAPOG00000008542	-	100	78.000	ENSSDUG00000003929	-	84	83.744	Seriola_dumerili
ENSAPOG00000008542	-	80	87.437	ENSSLDG00000010543	-	78	87.958	Seriola_lalandi_dorsalis
ENSAPOG00000008542	-	95	76.471	ENSSLDG00000016895	-	78	84.409	Seriola_lalandi_dorsalis
ENSAPOG00000008542	-	80	84.127	ENSSLDG00000016868	-	78	85.714	Seriola_lalandi_dorsalis
ENSAPOG00000008542	-	76	89.474	ENSSARG00000010949	-	63	90.217	Sorex_araneus
ENSAPOG00000008542	-	100	85.039	ENSSPUG00000000804	-	93	88.587	Sphenodon_punctatus
ENSAPOG00000008542	-	100	96.484	ENSSPAG00000014152	-	99	96.484	Stegastes_partitus
ENSAPOG00000008542	-	80	88.945	ENSSPAG00000022562	-	78	88.945	Stegastes_partitus
ENSAPOG00000008542	-	100	86.220	ENSSSCG00000017626	-	79	91.133	Sus_scrofa
ENSAPOG00000008542	-	56	87.050	ENSTGUG00000008416	-	72	89.209	Taeniopygia_guttata
ENSAPOG00000008542	-	80	87.437	ENSTRUG00000003691	srsf1a	78	87.958	Takifugu_rubripes
ENSAPOG00000008542	-	80	87.437	ENSTNIG00000016223	srsf1a	77	87.958	Tetraodon_nigroviridis
ENSAPOG00000008542	-	76	87.895	ENSTBEG00000015378	-	63	90.526	Tupaia_belangeri
ENSAPOG00000008542	-	55	89.130	ENSTTRG00000007310	SRSF1	72	91.304	Tursiops_truncatus
ENSAPOG00000008542	-	81	89.655	ENSUAMG00000009858	SRSF1	79	91.133	Ursus_americanus
ENSAPOG00000008542	-	100	86.220	ENSUMAG00000000455	-	78	91.133	Ursus_maritimus
ENSAPOG00000008542	-	81	89.163	ENSVPAG00000010094	SRSF1	79	90.640	Vicugna_pacos
ENSAPOG00000008542	-	100	86.220	ENSVVUG00000011882	-	78	91.133	Vulpes_vulpes
ENSAPOG00000008542	-	80	89.529	ENSXETG00000008954	srsf1	81	87.963	Xenopus_tropicalis
ENSAPOG00000008542	-	80	88.442	ENSXMAG00000011766	srsf1a	78	89.005	Xiphophorus_maculatus