EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000008913 (Gene tree)
Gene ID: 110949349
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 21409 bases
Position: chrMVNR01000104.1:389923-411331
Accession: 110949349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000006849	ResIII	PF04851.15	1.2e-06	1	1
ENSAPOP00000006904	ResIII	PF04851.15	1.2e-06	1	1
ENSAPOP00000025578	ResIII	PF04851.15	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000005850	-	7159	XM_022191333	ENSAPOP00000006904	1818 (aa)	XP_022047025	UPI000B8FF4CC
ENSAPOT00000005895	-	7021	XM_022191335	ENSAPOP00000025578	1772 (aa)	XP_022047027	-
ENSAPOT00000005948	-	5226	-	ENSAPOP00000006849	1741 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000008913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000008913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000008913	chd2	67	64.945	ENSAPOG00000005764	chd1	97	64.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000008913	chd2	100	71.927	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSAPOG00000008913	chd2	65	75.297	ENSAMEG00000010805	-	94	77.132	Ailuropoda_melanoleuca
ENSAPOG00000008913	chd2	99	97.645	ENSAOCG00000016332	chd2	99	97.645	Amphiprion_ocellaris
ENSAPOG00000008913	chd2	100	98.928	ENSAPEG00000016676	chd2	100	98.928	Amphiprion_percula
ENSAPOG00000008913	chd2	100	93.806	ENSATEG00000005246	chd2	100	93.919	Anabas_testudineus
ENSAPOG00000008913	chd2	100	71.198	ENSAPLG00000011141	-	96	71.572	Anas_platyrhynchos
ENSAPOG00000008913	chd2	98	69.319	ENSACAG00000000088	-	96	69.475	Anolis_carolinensis
ENSAPOG00000008913	chd2	100	71.805	ENSANAG00000024017	-	96	72.732	Aotus_nancymaae
ENSAPOG00000008913	chd2	98	92.186	ENSACLG00000021370	chd2	98	96.471	Astatotilapia_calliptera
ENSAPOG00000008913	chd2	100	71.590	ENSCJAG00000020444	-	96	72.508	Callithrix_jacchus
ENSAPOG00000008913	chd2	99	72.258	ENSCAFG00000010998	CHD2	95	75.922	Canis_familiaris
ENSAPOG00000008913	chd2	99	70.782	ENSCHIG00000022261	-	98	70.591	Capra_hircus
ENSAPOG00000008913	chd2	100	72.421	ENSTSYG00000003272	-	95	74.597	Carlito_syrichta
ENSAPOG00000008913	chd2	93	74.388	ENSCPOG00000005800	-	95	76.609	Cavia_porcellus
ENSAPOG00000008913	chd2	100	71.858	ENSCCAG00000035304	-	96	72.788	Cebus_capucinus
ENSAPOG00000008913	chd2	100	71.820	ENSCATG00000031069	-	96	72.692	Cercocebus_atys
ENSAPOG00000008913	chd2	100	71.444	ENSCLAG00000016269	-	96	72.188	Chinchilla_lanigera
ENSAPOG00000008913	chd2	100	71.873	ENSCSAG00000017007	-	96	72.748	Chlorocebus_sabaeus
ENSAPOG00000008913	chd2	73	81.258	ENSCHOG00000000608	-	75	81.337	Choloepus_hoffmanni
ENSAPOG00000008913	chd2	83	76.190	ENSCPBG00000018049	-	95	81.477	Chrysemys_picta_bellii
ENSAPOG00000008913	chd2	76	52.878	ENSCSAVG00000007580	-	94	58.635	Ciona_savignyi
ENSAPOG00000008913	chd2	100	71.820	ENSCANG00000038126	-	96	72.692	Colobus_angolensis_palliatus
ENSAPOG00000008913	chd2	100	72.166	ENSCGRG00001006649	Chd2	96	72.452	Cricetulus_griseus_chok1gshd
ENSAPOG00000008913	chd2	100	72.166	ENSCGRG00000018154	Chd2	96	72.452	Cricetulus_griseus_crigri
ENSAPOG00000008913	chd2	94	93.878	ENSCSEG00000003646	chd2	95	95.294	Cynoglossus_semilaevis
ENSAPOG00000008913	chd2	100	81.833	ENSCVAG00000002427	chd2	100	81.449	Cyprinodon_variegatus
ENSAPOG00000008913	chd2	100	81.121	ENSDARG00000060687	chd2	100	82.794	Danio_rerio
ENSAPOG00000008913	chd2	99	72.195	ENSDNOG00000009796	-	96	72.819	Dasypus_novemcinctus
ENSAPOG00000008913	chd2	52	75.532	ENSEBUG00000014994	chd2	85	76.087	Eptatretus_burgeri
ENSAPOG00000008913	chd2	98	74.034	ENSEASG00005015526	-	97	77.980	Equus_asinus_asinus
ENSAPOG00000008913	chd2	100	82.580	ENSELUG00000017981	chd2	97	96.552	Esox_lucius
ENSAPOG00000008913	chd2	96	72.138	ENSFALG00000010369	-	96	72.356	Ficedula_albicollis
ENSAPOG00000008913	chd2	100	71.622	ENSFDAG00000020651	-	96	72.524	Fukomys_damarensis
ENSAPOG00000008913	chd2	100	85.819	ENSFHEG00000002119	chd2	100	89.000	Fundulus_heteroclitus
ENSAPOG00000008913	chd2	95	83.931	ENSGMOG00000002890	chd2	99	84.046	Gadus_morhua
ENSAPOG00000008913	chd2	100	71.513	ENSGALG00000006949	CHD2	96	72.067	Gallus_gallus
ENSAPOG00000008913	chd2	99	89.229	ENSGAFG00000001905	chd2	97	89.412	Gambusia_affinis
ENSAPOG00000008913	chd2	95	89.983	ENSGACG00000013246	chd2	99	89.983	Gasterosteus_aculeatus
ENSAPOG00000008913	chd2	83	78.020	ENSGAGG00000013176	-	97	86.667	Gopherus_agassizii
ENSAPOG00000008913	chd2	100	70.892	ENSGGOG00000015677	CHD2	96	71.725	Gorilla_gorilla
ENSAPOG00000008913	chd2	100	94.338	ENSHBUG00000017947	chd2	100	94.502	Haplochromis_burtoni
ENSAPOG00000008913	chd2	100	71.314	ENSHGLG00000004435	CHD2	96	72.468	Heterocephalus_glaber_female
ENSAPOG00000008913	chd2	100	70.938	ENSHGLG00100016376	-	96	72.076	Heterocephalus_glaber_male
ENSAPOG00000008913	chd2	99	81.582	ENSHCOG00000008855	chd2	97	81.499	Hippocampus_comes
ENSAPOG00000008913	chd2	98	79.449	ENSIPUG00000000488	chd2	98	80.399	Ictalurus_punctatus
ENSAPOG00000008913	chd2	100	72.410	ENSSTOG00000001270	-	96	72.916	Ictidomys_tridecemlineatus
ENSAPOG00000008913	chd2	100	71.536	ENSJJAG00000000213	Chd2	96	72.508	Jaculus_jaculus
ENSAPOG00000008913	chd2	84	89.551	ENSKMAG00000015849	chd2	99	89.417	Kryptolebias_marmoratus
ENSAPOG00000008913	chd2	77	74.521	ENSLAFG00000016885	-	98	81.315	Loxodonta_africana
ENSAPOG00000008913	chd2	100	71.873	ENSMFAG00000033343	-	96	72.748	Macaca_fascicularis
ENSAPOG00000008913	chd2	100	71.873	ENSMMUG00000011782	-	96	72.748	Macaca_mulatta
ENSAPOG00000008913	chd2	100	71.635	ENSMNEG00000036875	-	96	72.499	Macaca_nemestrina
ENSAPOG00000008913	chd2	100	71.873	ENSMLEG00000035026	-	96	72.748	Mandrillus_leucophaeus
ENSAPOG00000008913	chd2	100	93.476	ENSMAMG00000009082	chd2	100	93.420	Mastacembelus_armatus
ENSAPOG00000008913	chd2	98	92.186	ENSMZEG00005021333	chd2	98	96.471	Maylandia_zebra
ENSAPOG00000008913	chd2	99	71.475	ENSMGAG00000008966	-	99	71.232	Meleagris_gallopavo
ENSAPOG00000008913	chd2	99	71.570	ENSMICG00000000332	-	98	70.923	Microcebus_murinus
ENSAPOG00000008913	chd2	100	72.195	ENSMOCG00000015124	Chd2	96	72.636	Microtus_ochrogaster
ENSAPOG00000008913	chd2	100	72.664	ENSMODG00000013158	-	96	73.307	Monodelphis_domestica
ENSAPOG00000008913	chd2	98	91.060	ENSMALG00000007755	chd2	96	95.294	Monopterus_albus
ENSAPOG00000008913	chd2	100	72.312	MGP_CAROLIEiJ_G0029860	Chd2	96	72.717	Mus_caroli
ENSAPOG00000008913	chd2	100	71.897	ENSMUSG00000078671	Chd2	96	72.732	Mus_musculus
ENSAPOG00000008913	chd2	100	72.312	MGP_PahariEiJ_G0013082	Chd2	96	72.605	Mus_pahari
ENSAPOG00000008913	chd2	100	72.273	MGP_SPRETEiJ_G0030962	Chd2	96	72.676	Mus_spretus
ENSAPOG00000008913	chd2	100	72.288	ENSMPUG00000017577	-	96	72.844	Mustela_putorius_furo
ENSAPOG00000008913	chd2	100	71.535	ENSMLUG00000009292	-	97	71.476	Myotis_lucifugus
ENSAPOG00000008913	chd2	100	72.449	ENSNGAG00000010792	Chd2	96	72.788	Nannospalax_galili
ENSAPOG00000008913	chd2	98	92.612	ENSNBRG00000020591	chd2	99	92.246	Neolamprologus_brichardi
ENSAPOG00000008913	chd2	100	69.941	ENSNLEG00000012349	-	95	72.488	Nomascus_leucogenys
ENSAPOG00000008913	chd2	72	77.237	ENSMEUG00000001522	-	68	80.392	Notamacropus_eugenii
ENSAPOG00000008913	chd2	100	71.013	ENSODEG00000016028	-	96	71.796	Octodon_degus
ENSAPOG00000008913	chd2	100	94.228	ENSONIG00000015136	chd2	100	94.283	Oreochromis_niloticus
ENSAPOG00000008913	chd2	88	69.144	ENSOANG00000004385	-	99	69.290	Ornithorhynchus_anatinus
ENSAPOG00000008913	chd2	100	66.649	ENSOCUG00000001628	-	93	77.426	Oryctolagus_cuniculus
ENSAPOG00000008913	chd2	100	91.109	ENSORLG00000008403	chd2	100	91.109	Oryzias_latipes
ENSAPOG00000008913	chd2	100	90.500	ENSORLG00020004138	chd2	100	90.719	Oryzias_latipes_hni
ENSAPOG00000008913	chd2	100	83.653	ENSOMEG00000005831	chd2	100	81.778	Oryzias_melastigma
ENSAPOG00000008913	chd2	100	70.320	ENSOGAG00000010399	-	96	70.901	Otolemur_garnettii
ENSAPOG00000008913	chd2	100	72.977	ENSOARG00000010343	-	96	73.578	Ovis_aries
ENSAPOG00000008913	chd2	100	70.806	ENSPPAG00000030381	-	96	71.413	Pan_paniscus
ENSAPOG00000008913	chd2	100	71.873	ENSPTRG00000007478	CHD2	96	72.748	Pan_troglodytes
ENSAPOG00000008913	chd2	100	69.243	ENSPANG00000033355	-	96	70.006	Papio_anubis
ENSAPOG00000008913	chd2	100	81.868	ENSPKIG00000000495	chd2	100	82.523	Paramormyrops_kingsleyae
ENSAPOG00000008913	chd2	85	84.176	ENSPMGG00000009941	chd2	99	83.979	Periophthalmus_magnuspinnatus
ENSAPOG00000008913	chd2	100	72.166	ENSPEMG00000019507	Chd2	96	72.508	Peromyscus_maniculatus_bairdii
ENSAPOG00000008913	chd2	93	74.171	ENSPCIG00000009417	-	99	76.625	Phascolarctos_cinereus
ENSAPOG00000008913	chd2	100	91.644	ENSPFOG00000007050	chd2	100	91.699	Poecilia_formosa
ENSAPOG00000008913	chd2	100	91.864	ENSPLAG00000005067	chd2	100	91.864	Poecilia_latipinna
ENSAPOG00000008913	chd2	100	92.160	ENSPMEG00000019628	chd2	100	92.217	Poecilia_mexicana
ENSAPOG00000008913	chd2	100	70.639	ENSPPYG00000006799	-	96	71.461	Pongo_abelii
ENSAPOG00000008913	chd2	100	72.165	ENSPCOG00000028084	-	96	72.692	Propithecus_coquereli
ENSAPOG00000008913	chd2	98	92.416	ENSPNYG00000010273	chd2	98	96.471	Pundamilia_nyererei
ENSAPOG00000008913	chd2	99	79.412	ENSPNAG00000016719	chd2	100	79.322	Pygocentrus_nattereri
ENSAPOG00000008913	chd2	100	72.273	ENSRNOG00000012716	Chd2	97	71.722	Rattus_norvegicus
ENSAPOG00000008913	chd2	100	70.354	ENSRBIG00000036875	-	96	70.868	Rhinopithecus_bieti
ENSAPOG00000008913	chd2	100	71.873	ENSRROG00000041087	-	96	72.748	Rhinopithecus_roxellana
ENSAPOG00000008913	chd2	100	71.805	ENSSBOG00000023754	-	96	72.732	Saimiri_boliviensis_boliviensis
ENSAPOG00000008913	chd2	100	72.932	ENSSHAG00000012513	-	96	73.475	Sarcophilus_harrisii
ENSAPOG00000008913	chd2	100	83.224	ENSSFOG00015023759	chd2	100	82.779	Scleropages_formosus
ENSAPOG00000008913	chd2	100	92.755	ENSSMAG00000001726	chd2	99	96.471	Scophthalmus_maximus
ENSAPOG00000008913	chd2	98	93.187	ENSSLDG00000001146	chd2	98	96.471	Seriola_lalandi_dorsalis
ENSAPOG00000008913	chd2	77	80.000	ENSSARG00000014112	-	75	80.000	Sorex_araneus
ENSAPOG00000008913	chd2	99	70.221	ENSSPUG00000011266	-	97	70.753	Sphenodon_punctatus
ENSAPOG00000008913	chd2	98	94.900	ENSSPAG00000016452	chd2	97	97.647	Stegastes_partitus
ENSAPOG00000008913	chd2	100	72.273	ENSSSCG00000002266	-	100	75.063	Sus_scrofa
ENSAPOG00000008913	chd2	96	72.316	ENSTGUG00000008540	-	96	72.383	Taeniopygia_guttata
ENSAPOG00000008913	chd2	88	85.120	ENSTRUG00000008842	chd2	91	84.860	Takifugu_rubripes
ENSAPOG00000008913	chd2	89	87.798	ENSTNIG00000010760	chd2	98	87.946	Tetraodon_nigroviridis
ENSAPOG00000008913	chd2	73	70.925	ENSTBEG00000017730	-	78	70.925	Tupaia_belangeri
ENSAPOG00000008913	chd2	90	74.439	ENSTTRG00000000430	-	90	74.551	Tursiops_truncatus
ENSAPOG00000008913	chd2	100	70.690	ENSUMAG00000000083	-	96	71.296	Ursus_maritimus
ENSAPOG00000008913	chd2	84	86.618	ENSVPAG00000009645	-	82	86.618	Vicugna_pacos
ENSAPOG00000008913	chd2	91	74.286	ENSXETG00000024129	chd2	89	77.718	Xenopus_tropicalis
ENSAPOG00000008913	chd2	96	93.333	ENSXCOG00000020255	chd2	99	91.765	Xiphophorus_couchianus
ENSAPOG00000008913	chd2	100	92.156	ENSXMAG00000002707	chd2	100	92.212	Xiphophorus_maculatus