EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000009188 (Gene tree)
Gene ID: 110965216
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 4038 bases
Position: chrMVNR01001387.1:20993-25030
Accession: 110965216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000007251	MMR_HSR1	PF01926.23	7.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000005263	-	2183	XM_022214158	ENSAPOP00000007251	218 (aa)	XP_022069850	UPI000B8F3A1E

Gene Model

Click here to download ENSAPOG00000009188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000009188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000009188	rab42a	90	31.188	ENSAPOG00000003165	rab34a	73	31.795
ENSAPOG00000009188	rab42a	75	30.723	ENSAPOG00000023708	rabl2	71	30.723
ENSAPOG00000009188	rab42a	75	37.725	ENSAPOG00000007269	rab9b	73	37.725
ENSAPOG00000009188	rab42a	74	36.646	ENSAPOG00000014397	rab6bb	75	38.217
ENSAPOG00000009188	rab42a	71	44.872	ENSAPOG00000019727	rab33ba	63	44.872
ENSAPOG00000009188	rab42a	97	32.227	ENSAPOG00000019100	rab6ba	87	34.973
ENSAPOG00000009188	rab42a	75	45.455	ENSAPOG00000021268	rab25a	79	45.238
ENSAPOG00000009188	rab42a	72	40.625	ENSAPOG00000000952	rab33a	74	40.625
ENSAPOG00000009188	rab42a	75	31.928	ENSAPOG00000015680	-	82	31.928
ENSAPOG00000009188	rab42a	72	34.177	ENSAPOG00000008892	rab23	70	33.529
ENSAPOG00000009188	rab42a	98	43.318	ENSAPOG00000009138	rab2a	89	46.842
ENSAPOG00000009188	rab42a	82	42.135	ENSAPOG00000008143	-	87	42.135
ENSAPOG00000009188	rab42a	96	38.318	ENSAPOG00000008754	rab15	76	42.945
ENSAPOG00000009188	rab42a	75	36.585	ENSAPOG00000016864	rab5c	74	36.585
ENSAPOG00000009188	rab42a	100	53.670	ENSAPOG00000005301	RAB39B	93	57.286
ENSAPOG00000009188	rab42a	94	38.049	ENSAPOG00000023455	rab11bb	83	41.530
ENSAPOG00000009188	rab42a	72	39.490	ENSAPOG00000005731	rab6a	73	39.490
ENSAPOG00000009188	rab42a	76	31.515	ENSAPOG00000015316	rhebl1	87	31.515
ENSAPOG00000009188	rab42a	78	41.420	ENSAPOG00000001040	-	84	41.420
ENSAPOG00000009188	rab42a	94	33.014	ENSAPOG00000022911	rab36	60	36.025
ENSAPOG00000009188	rab42a	84	41.530	ENSAPOG00000018256	rab11a	84	41.530
ENSAPOG00000009188	rab42a	83	40.000	ENSAPOG00000008216	rab25b	86	40.000
ENSAPOG00000009188	rab42a	69	36.842	ENSAPOG00000001356	si:ch73-116o1.2	79	36.145
ENSAPOG00000009188	rab42a	79	43.353	ENSAPOG00000004980	-	80	43.353
ENSAPOG00000009188	rab42a	75	34.756	ENSAPOG00000011559	rab22a	84	34.756
ENSAPOG00000009188	rab42a	74	35.802	ENSAPOG00000021391	rab5aa	74	35.802
ENSAPOG00000009188	rab42a	73	44.375	ENSAPOG00000022625	rab30	78	44.375
ENSAPOG00000009188	rab42a	76	35.542	ENSAPOG00000004154	rras2	81	35.542
ENSAPOG00000009188	rab42a	84	40.217	ENSAPOG00000012767	rab1ba	91	40.217
ENSAPOG00000009188	rab42a	76	41.212	ENSAPOG00000019881	rab18b	80	41.212
ENSAPOG00000009188	rab42a	76	37.059	ENSAPOG00000021928	rab9a	82	37.059
ENSAPOG00000009188	rab42a	77	33.929	ENSAPOG00000003215	-	89	33.929
ENSAPOG00000009188	rab42a	76	40.000	ENSAPOG00000010760	rab18a	80	40.000
ENSAPOG00000009188	rab42a	78	33.526	ENSAPOG00000019147	rab34b	70	35.616
ENSAPOG00000009188	rab42a	67	41.892	ENSAPOG00000007503	zgc:101559	63	41.892
ENSAPOG00000009188	rab42a	85	33.333	ENSAPOG00000004311	-	94	33.333
ENSAPOG00000009188	rab42a	69	33.775	ENSAPOG00000023684	hrasb	85	32.927
ENSAPOG00000009188	rab42a	82	42.135	ENSAPOG00000007746	rab1ab	87	42.135
ENSAPOG00000009188	rab42a	70	39.474	ENSAPOG00000011363	-	66	39.474
ENSAPOG00000009188	rab42a	72	39.490	ENSAPOG00000016512	-	75	39.490
ENSAPOG00000009188	rab42a	74	34.337	ENSAPOG00000002585	RAB7A	79	34.337
ENSAPOG00000009188	rab42a	96	37.559	ENSAPOG00000006211	RAB15	78	41.667
ENSAPOG00000009188	rab42a	75	43.293	ENSAPOG00000007363	rab35b	80	43.293
ENSAPOG00000009188	rab42a	80	42.286	ENSAPOG00000008263	si:dkey-16l2.16	82	42.286
ENSAPOG00000009188	rab42a	67	41.447	ENSAPOG00000005341	-	62	41.447
ENSAPOG00000009188	rab42a	73	32.919	ENSAPOG00000014783	kras	98	31.414
ENSAPOG00000009188	rab42a	74	34.337	ENSAPOG00000016091	-	79	34.337
ENSAPOG00000009188	rab42a	84	42.077	ENSAPOG00000008251	rab11al	84	42.077
ENSAPOG00000009188	rab42a	98	38.318	ENSAPOG00000008641	rab14	97	38.318
ENSAPOG00000009188	rab42a	75	39.521	ENSAPOG00000005603	RAB9A	76	39.521
ENSAPOG00000009188	rab42a	100	54.587	ENSAPOG00000014970	-	93	58.291

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000009188	rab42a	100	97.248	ENSACIG00000003102	rab42a	100	97.248	Amphilophus_citrinellus
ENSAPOG00000009188	rab42a	100	98.165	ENSAOCG00000012921	rab42a	83	98.165	Amphiprion_ocellaris
ENSAPOG00000009188	rab42a	100	98.165	ENSAPEG00000007713	rab42a	83	98.165	Amphiprion_percula
ENSAPOG00000009188	rab42a	100	95.872	ENSATEG00000009052	rab42a	100	95.872	Anabas_testudineus
ENSAPOG00000009188	rab42a	100	96.789	ENSACLG00000007514	rab42a	100	96.330	Astatotilapia_calliptera
ENSAPOG00000009188	rab42a	100	92.202	ENSAMXG00000032729	rab42a	100	90.367	Astyanax_mexicanus
ENSAPOG00000009188	rab42a	100	93.578	ENSCSEG00000010582	rab42a	100	93.578	Cynoglossus_semilaevis
ENSAPOG00000009188	rab42a	100	91.743	ENSDARG00000034215	rab42a	100	89.908	Danio_rerio
ENSAPOG00000009188	rab42a	100	46.119	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSAPOG00000009188	rab42a	100	90.367	ENSELUG00000010345	rab42a	100	90.367	Esox_lucius
ENSAPOG00000009188	rab42a	100	96.789	ENSFHEG00000013106	rab42a	100	96.789	Fundulus_heteroclitus
ENSAPOG00000009188	rab42a	100	94.954	ENSGAFG00000002141	rab42a	100	94.954	Gambusia_affinis
ENSAPOG00000009188	rab42a	100	96.789	ENSHBUG00000015126	rab42a	82	96.330	Haplochromis_burtoni
ENSAPOG00000009188	rab42a	100	88.991	ENSIPUG00000011376	rab42a	100	87.156	Ictalurus_punctatus
ENSAPOG00000009188	rab42a	100	96.330	ENSKMAG00000007267	rab42a	100	96.330	Kryptolebias_marmoratus
ENSAPOG00000009188	rab42a	100	96.789	ENSLBEG00000001193	rab42a	100	96.789	Labrus_bergylta
ENSAPOG00000009188	rab42a	100	65.138	ENSLACG00000012755	-	94	68.500	Latimeria_chalumnae
ENSAPOG00000009188	rab42a	100	83.486	ENSLOCG00000003453	rab42a	94	88.000	Lepisosteus_oculatus
ENSAPOG00000009188	rab42a	100	51.598	ENSLOCG00000015825	-	99	51.598	Lepisosteus_oculatus
ENSAPOG00000009188	rab42a	100	97.706	ENSMAMG00000002296	rab42a	100	97.706	Mastacembelus_armatus
ENSAPOG00000009188	rab42a	100	96.789	ENSMZEG00005012460	rab42a	82	96.330	Maylandia_zebra
ENSAPOG00000009188	rab42a	100	93.119	ENSMMOG00000014358	rab42a	100	93.119	Mola_mola
ENSAPOG00000009188	rab42a	100	96.789	ENSNBRG00000021487	rab42a	82	96.789	Neolamprologus_brichardi
ENSAPOG00000009188	rab42a	100	95.872	ENSORLG00000022335	rab42a	100	95.872	Oryzias_latipes
ENSAPOG00000009188	rab42a	100	95.872	ENSORLG00020013895	rab42a	100	95.872	Oryzias_latipes_hni
ENSAPOG00000009188	rab42a	100	95.872	ENSORLG00015004273	rab42a	100	95.872	Oryzias_latipes_hsok
ENSAPOG00000009188	rab42a	100	95.872	ENSOMEG00000020418	rab42a	100	95.872	Oryzias_melastigma
ENSAPOG00000009188	rab42a	100	77.982	ENSPKIG00000021215	-	93	82.412	Paramormyrops_kingsleyae
ENSAPOG00000009188	rab42a	89	50.000	ENSPKIG00000015234	-	93	50.000	Paramormyrops_kingsleyae
ENSAPOG00000009188	rab42a	90	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSAPOG00000009188	rab42a	100	94.495	ENSPFOG00000004838	rab42a	82	94.495	Poecilia_formosa
ENSAPOG00000009188	rab42a	100	94.495	ENSPLAG00000005628	rab42a	100	94.495	Poecilia_latipinna
ENSAPOG00000009188	rab42a	100	94.495	ENSPMEG00000019497	rab42a	100	94.495	Poecilia_mexicana
ENSAPOG00000009188	rab42a	100	94.954	ENSPREG00000013962	rab42a	100	94.954	Poecilia_reticulata
ENSAPOG00000009188	rab42a	100	96.789	ENSPNYG00000010325	rab42a	82	96.330	Pundamilia_nyererei
ENSAPOG00000009188	rab42a	100	91.743	ENSPNAG00000016567	rab42a	100	89.908	Pygocentrus_nattereri
ENSAPOG00000009188	rab42a	100	86.239	ENSSFOG00015020732	rab42a	100	84.862	Scleropages_formosus
ENSAPOG00000009188	rab42a	100	46.575	ENSSFOG00015016000	-	97	46.575	Scleropages_formosus
ENSAPOG00000009188	rab42a	100	94.037	ENSSMAG00000020311	rab42a	100	94.037	Scophthalmus_maximus
ENSAPOG00000009188	rab42a	100	96.789	ENSSDUG00000011851	rab42a	100	96.789	Seriola_dumerili
ENSAPOG00000009188	rab42a	100	96.789	ENSSLDG00000020354	rab42a	100	96.789	Seriola_lalandi_dorsalis
ENSAPOG00000009188	rab42a	100	98.624	ENSSPAG00000016167	rab42a	100	98.624	Stegastes_partitus
ENSAPOG00000009188	rab42a	100	96.789	ENSTRUG00000010224	rab42a	100	96.789	Takifugu_rubripes
ENSAPOG00000009188	rab42a	100	95.413	ENSXCOG00000003428	rab42a	100	95.413	Xiphophorus_couchianus
ENSAPOG00000009188	rab42a	100	95.413	ENSXMAG00000028376	rab42a	100	95.413	Xiphophorus_maculatus