EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000009771 (Gene tree)
Gene ID: 110952816
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 7213 bases
Position: chrMVNR01000263.1:54202-61414
Accession: 110952816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000026117	RRM_1	PF00076.22	3.4e-07	1	1
ENSAPOP00000026128	RRM_1	PF00076.22	4.1e-07	1	1
ENSAPOP00000007720	RRM_1	PF00076.22	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000004520	-	1497	-	ENSAPOP00000026117	498 (aa)	-	-
ENSAPOT00000004469	-	1931	XM_022196546	ENSAPOP00000007720	585 (aa)	XP_022052238	UPI000B8FB8B7
ENSAPOT00000004492	-	1823	XM_022196547	ENSAPOP00000026128	549 (aa)	XP_022052239	UPI000B8F5633

Gene Model

Click here to download ENSAPOG00000009771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000009771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000009771	-	100	99.658	ENSAOCG00000024134	-	100	99.658	Amphiprion_ocellaris
ENSAPOG00000009771	-	100	99.829	ENSAPEG00000004361	-	100	99.829	Amphiprion_percula
ENSAPOG00000009771	-	100	98.182	ENSATEG00000014806	-	100	98.182	Anabas_testudineus
ENSAPOG00000009771	-	73	80.392	ENSAPLG00000010887	CPSF6	76	83.784	Anas_platyrhynchos
ENSAPOG00000009771	-	95	43.002	ENSCPBG00000017691	-	72	56.395	Chrysemys_picta_bellii
ENSAPOG00000009771	-	95	45.603	ENSDORG00000000998	-	73	57.558	Dipodomys_ordii
ENSAPOG00000009771	-	94	82.218	ENSGALG00000019355	CPSF6	77	83.908	Gallus_gallus