EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000009939 (Gene tree)
Gene ID: 110948067
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 10155 bases
Position: chrMVNR01000006.1:2057421-2067575
Accession: 110948067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000007889	RRM_1	PF00076.22	2.6e-16	1	1
ENSAPOP00000026263	RRM_1	PF00076.22	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000004177	-	663	-	ENSAPOP00000007889	220 (aa)	-	-
ENSAPOT00000004166	-	2977	XM_022189448	ENSAPOP00000026263	244 (aa)	XP_022045140	UPI000B8F57CF

Gene Model

Click here to download ENSAPOG00000009939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000009939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000009939	-	70	72.050	ENSAPOG00000000789	rbm24b	100	61.506
ENSAPOG00000009939	-	100	66.403	ENSAPOG00000003301	rbm38	98	65.079
ENSAPOG00000009939	-	95	59.322	ENSAPOG00000019514	rbm24a	100	61.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000009939	-	94	67.117	ENSG00000132819	RBM38	94	86.441	Homo_sapiens
ENSAPOG00000009939	-	100	93.852	ENSACIG00000012502	-	100	97.458	Amphilophus_citrinellus
ENSAPOG00000009939	-	100	65.217	ENSACIG00000000010	rbm38	98	64.286	Amphilophus_citrinellus
ENSAPOG00000009939	-	97	99.156	ENSAOCG00000012559	RBM38	100	99.156	Amphiprion_ocellaris
ENSAPOG00000009939	-	100	66.798	ENSAOCG00000013497	-	98	65.476	Amphiprion_ocellaris
ENSAPOG00000009939	-	95	72.350	ENSAPEG00000013137	rbm38	98	65.476	Amphiprion_percula
ENSAPOG00000009939	-	100	98.770	ENSAPEG00000023581	-	100	98.770	Amphiprion_percula
ENSAPOG00000009939	-	100	64.062	ENSATEG00000016366	rbm38	99	64.255	Anabas_testudineus
ENSAPOG00000009939	-	100	95.902	ENSATEG00000016710	-	100	95.902	Anabas_testudineus
ENSAPOG00000009939	-	94	69.369	ENSACAG00000016238	RBM38	90	68.326	Anolis_carolinensis
ENSAPOG00000009939	-	94	68.018	ENSANAG00000031959	RBM38	82	90.099	Aotus_nancymaae
ENSAPOG00000009939	-	100	91.393	ENSACLG00000019514	-	100	91.393	Astatotilapia_calliptera
ENSAPOG00000009939	-	96	65.812	ENSAMXG00000038120	rbm38	82	71.574	Astyanax_mexicanus
ENSAPOG00000009939	-	100	78.689	ENSAMXG00000015601	-	100	76.471	Astyanax_mexicanus
ENSAPOG00000009939	-	94	68.326	ENSBTAG00000008105	RBM38	91	67.873	Bos_taurus
ENSAPOG00000009939	-	54	65.385	WBGene00006321	sup-12	59	83.146	Caenorhabditis_elegans
ENSAPOG00000009939	-	94	68.018	ENSCJAG00000019139	RBM38	82	90.099	Callithrix_jacchus
ENSAPOG00000009939	-	94	69.369	ENSCAFG00020021943	RBM38	91	68.018	Canis_lupus_dingo
ENSAPOG00000009939	-	94	66.667	ENSCHIG00000002609	RBM38	91	66.216	Capra_hircus
ENSAPOG00000009939	-	94	67.117	ENSCPOG00000012781	RBM38	91	66.667	Cavia_porcellus
ENSAPOG00000009939	-	94	68.018	ENSCCAG00000036872	RBM38	82	90.099	Cebus_capucinus
ENSAPOG00000009939	-	94	69.091	ENSCATG00000032133	RBM38	82	90.099	Cercocebus_atys
ENSAPOG00000009939	-	94	66.667	ENSCLAG00000005906	RBM38	94	66.063	Chinchilla_lanigera
ENSAPOG00000009939	-	94	69.091	ENSCSAG00000015503	RBM38	90	68.950	Chlorocebus_sabaeus
ENSAPOG00000009939	-	92	71.759	ENSCPBG00000024059	RBM38	99	69.767	Chrysemys_picta_bellii
ENSAPOG00000009939	-	95	54.128	ENSCANG00000030105	-	80	52.752	Colobus_angolensis_palliatus
ENSAPOG00000009939	-	96	65.487	ENSCGRG00001012928	Rbm38	93	66.372	Cricetulus_griseus_chok1gshd
ENSAPOG00000009939	-	100	91.393	ENSCSEG00000004701	-	100	91.393	Cynoglossus_semilaevis
ENSAPOG00000009939	-	85	63.351	ENSCSEG00000020943	rbm38	63	65.104	Cynoglossus_semilaevis
ENSAPOG00000009939	-	100	89.344	ENSCVAG00000005472	-	100	89.344	Cyprinodon_variegatus
ENSAPOG00000009939	-	99	62.249	ENSCVAG00000015952	rbm38	98	61.905	Cyprinodon_variegatus
ENSAPOG00000009939	-	89	82.564	ENSDARG00000058818	rbm38	82	82.564	Danio_rerio
ENSAPOG00000009939	-	94	71.028	ENSDNOG00000032004	RBM38	100	69.484	Dasypus_novemcinctus
ENSAPOG00000009939	-	94	68.468	ENSECAG00000007700	RBM38	91	67.568	Equus_caballus
ENSAPOG00000009939	-	94	67.265	ENSEEUG00000013489	RBM38	91	68.018	Erinaceus_europaeus
ENSAPOG00000009939	-	90	70.707	ENSELUG00000000585	-	98	64.444	Esox_lucius
ENSAPOG00000009939	-	100	82.731	ENSELUG00000005849	-	100	82.329	Esox_lucius
ENSAPOG00000009939	-	94	67.873	ENSFCAG00000042916	RBM38	82	89.109	Felis_catus
ENSAPOG00000009939	-	77	77.326	ENSFALG00000010805	RBM38	88	74.118	Ficedula_albicollis
ENSAPOG00000009939	-	100	61.569	ENSFHEG00000017748	rbm38	98	61.508	Fundulus_heteroclitus
ENSAPOG00000009939	-	100	89.286	ENSFHEG00000006160	-	100	89.286	Fundulus_heteroclitus
ENSAPOG00000009939	-	83	87.568	ENSGMOG00000016655	-	99	85.405	Gadus_morhua
ENSAPOG00000009939	-	92	70.370	ENSGALG00000026081	RBM38	99	69.767	Gallus_gallus
ENSAPOG00000009939	-	94	71.226	ENSGACG00000015224	rbm38	100	71.226	Gasterosteus_aculeatus
ENSAPOG00000009939	-	94	87.097	ENSGACG00000009873	-	100	87.097	Gasterosteus_aculeatus
ENSAPOG00000009939	-	92	71.296	ENSGAGG00000001187	RBM38	99	69.767	Gopherus_agassizii
ENSAPOG00000009939	-	100	91.393	ENSHBUG00000011778	-	100	91.393	Haplochromis_burtoni
ENSAPOG00000009939	-	100	64.706	ENSHBUG00000012058	rbm38	98	64.286	Haplochromis_burtoni
ENSAPOG00000009939	-	94	65.611	ENSHGLG00000015077	RBM38	91	67.568	Heterocephalus_glaber_female
ENSAPOG00000009939	-	92	91.089	ENSHCOG00000005622	-	58	91.089	Hippocampus_comes
ENSAPOG00000009939	-	89	56.122	ENSHCOG00000019040	rbm38	78	55.612	Hippocampus_comes
ENSAPOG00000009939	-	100	72.874	ENSIPUG00000019349	-	100	72.083	Ictalurus_punctatus
ENSAPOG00000009939	-	92	60.515	ENSKMAG00000012402	rbm38	98	60.515	Kryptolebias_marmoratus
ENSAPOG00000009939	-	100	92.339	ENSLBEG00000016163	RBM38	100	92.339	Labrus_bergylta
ENSAPOG00000009939	-	100	66.270	ENSLBEG00000018878	rbm38	98	65.098	Labrus_bergylta
ENSAPOG00000009939	-	100	76.170	ENSLOCG00000003456	rbm38	100	76.170	Lepisosteus_oculatus
ENSAPOG00000009939	-	94	69.091	ENSMFAG00000043808	RBM38	82	90.099	Macaca_fascicularis
ENSAPOG00000009939	-	94	69.091	ENSMMUG00000031391	RBM38	82	90.099	Macaca_mulatta
ENSAPOG00000009939	-	94	69.091	ENSMNEG00000034683	RBM38	82	90.099	Macaca_nemestrina
ENSAPOG00000009939	-	50	72.727	ENSMLEG00000043261	-	89	72.727	Mandrillus_leucophaeus
ENSAPOG00000009939	-	100	95.082	ENSMAMG00000020499	RBM38	100	95.082	Mastacembelus_armatus
ENSAPOG00000009939	-	100	67.059	ENSMAMG00000024135	rbm38	98	64.683	Mastacembelus_armatus
ENSAPOG00000009939	-	100	64.706	ENSMZEG00005026036	rbm38	98	64.286	Maylandia_zebra
ENSAPOG00000009939	-	100	91.393	ENSMZEG00005000849	-	100	91.393	Maylandia_zebra
ENSAPOG00000009939	-	96	67.257	ENSMAUG00000021211	Rbm38	93	67.699	Mesocricetus_auratus
ENSAPOG00000009939	-	94	69.369	ENSMICG00000038011	RBM38	100	68.778	Microcebus_murinus
ENSAPOG00000009939	-	97	66.228	ENSMOCG00000008715	Rbm38	94	66.960	Microtus_ochrogaster
ENSAPOG00000009939	-	100	94.262	ENSMMOG00000020051	-	100	94.262	Mola_mola
ENSAPOG00000009939	-	92	68.519	ENSMODG00000016458	RBM38	91	68.372	Monodelphis_domestica
ENSAPOG00000009939	-	86	96.296	ENSMALG00000004680	RBM38	72	96.296	Monopterus_albus
ENSAPOG00000009939	-	76	72.941	ENSMALG00000022327	rbm38	71	72.892	Monopterus_albus
ENSAPOG00000009939	-	97	62.115	MGP_CAROLIEiJ_G0024745	Rbm38	94	64.758	Mus_caroli
ENSAPOG00000009939	-	97	62.115	ENSMUSG00000027510	Rbm38	94	64.758	Mus_musculus
ENSAPOG00000009939	-	97	62.115	MGP_PahariEiJ_G0026186	Rbm38	94	64.758	Mus_pahari
ENSAPOG00000009939	-	97	62.115	MGP_SPRETEiJ_G0025665	Rbm38	94	64.758	Mus_spretus
ENSAPOG00000009939	-	83	73.404	ENSMPUG00000006518	RBM38	96	71.066	Mustela_putorius_furo
ENSAPOG00000009939	-	94	67.117	ENSMLUG00000011140	RBM38	100	66.516	Myotis_lucifugus
ENSAPOG00000009939	-	100	91.803	ENSNBRG00000022545	-	100	91.803	Neolamprologus_brichardi
ENSAPOG00000009939	-	100	65.098	ENSNBRG00000022685	rbm38	98	64.683	Neolamprologus_brichardi
ENSAPOG00000009939	-	51	80.357	ENSMEUG00000005475	-	84	80.357	Notamacropus_eugenii
ENSAPOG00000009939	-	94	67.568	ENSODEG00000007980	RBM38	91	67.117	Octodon_degus
ENSAPOG00000009939	-	99	91.770	ENSONIG00000020324	-	100	91.770	Oreochromis_niloticus
ENSAPOG00000009939	-	99	64.961	ENSONIG00000017073	rbm38	100	64.542	Oreochromis_niloticus
ENSAPOG00000009939	-	91	69.811	ENSOANG00000009259	RBM38	81	69.048	Ornithorhynchus_anatinus
ENSAPOG00000009939	-	100	86.992	ENSORLG00000027180	-	100	88.211	Oryzias_latipes
ENSAPOG00000009939	-	99	58.800	ENSORLG00000012154	rbm38	98	58.333	Oryzias_latipes
ENSAPOG00000009939	-	100	59.127	ENSORLG00020017871	rbm38	98	59.127	Oryzias_latipes_hni
ENSAPOG00000009939	-	100	86.992	ENSORLG00020020751	-	100	88.211	Oryzias_latipes_hni
ENSAPOG00000009939	-	100	88.571	ENSORLG00015017040	-	100	88.163	Oryzias_latipes_hsok
ENSAPOG00000009939	-	100	59.127	ENSORLG00015012606	rbm38	98	59.127	Oryzias_latipes_hsok
ENSAPOG00000009939	-	100	90.984	ENSOMEG00000023912	-	100	90.984	Oryzias_melastigma
ENSAPOG00000009939	-	99	60.800	ENSOMEG00000006805	rbm38	98	60.317	Oryzias_melastigma
ENSAPOG00000009939	-	94	67.568	ENSOGAG00000029136	RBM38	90	67.117	Otolemur_garnettii
ENSAPOG00000009939	-	94	67.873	ENSPPRG00000009507	RBM38	82	89.109	Panthera_pardus
ENSAPOG00000009939	-	57	84.127	ENSPTRG00000045845	-	68	84.127	Pan_troglodytes
ENSAPOG00000009939	-	83	73.404	ENSPTRG00000013661	RBM38	82	90.099	Pan_troglodytes
ENSAPOG00000009939	-	94	55.909	ENSPANG00000033127	-	94	55.708	Papio_anubis
ENSAPOG00000009939	-	94	69.091	ENSPANG00000020919	-	82	90.099	Papio_anubis
ENSAPOG00000009939	-	100	70.683	ENSPKIG00000025417	rbm38	100	70.281	Paramormyrops_kingsleyae
ENSAPOG00000009939	-	100	74.138	ENSPKIG00000018122	-	100	86.441	Paramormyrops_kingsleyae
ENSAPOG00000009939	-	96	69.333	ENSPSIG00000011649	RBM38	94	67.857	Pelodiscus_sinensis
ENSAPOG00000009939	-	100	83.871	ENSPMGG00000017094	-	100	84.274	Periophthalmus_magnuspinnatus
ENSAPOG00000009939	-	99	64.542	ENSPMGG00000011343	rbm38	98	64.143	Periophthalmus_magnuspinnatus
ENSAPOG00000009939	-	92	69.444	ENSPCIG00000013648	RBM38	91	67.907	Phascolarctos_cinereus
ENSAPOG00000009939	-	100	60.236	ENSPFOG00000011658	rbm38	98	60.392	Poecilia_formosa
ENSAPOG00000009939	-	100	60.392	ENSPLAG00000005218	rbm38	98	60.392	Poecilia_latipinna
ENSAPOG00000009939	-	100	87.398	ENSPLAG00000002500	-	100	87.398	Poecilia_latipinna
ENSAPOG00000009939	-	100	59.449	ENSPMEG00000015770	rbm38	98	60.392	Poecilia_mexicana
ENSAPOG00000009939	-	100	60.236	ENSPREG00000007398	rbm38	98	60.392	Poecilia_reticulata
ENSAPOG00000009939	-	94	68.018	ENSPCOG00000026201	RBM38	81	90.099	Propithecus_coquereli
ENSAPOG00000009939	-	67	87.097	ENSPVAG00000006457	RBM38	66	87.097	Pteropus_vampyrus
ENSAPOG00000009939	-	100	91.393	ENSPNYG00000019727	-	100	96.610	Pundamilia_nyererei
ENSAPOG00000009939	-	100	64.314	ENSPNYG00000021373	rbm38	98	63.889	Pundamilia_nyererei
ENSAPOG00000009939	-	89	79.592	ENSPNAG00000010596	rbm38	82	79.592	Pygocentrus_nattereri
ENSAPOG00000009939	-	100	77.459	ENSPNAG00000015123	-	98	82.836	Pygocentrus_nattereri
ENSAPOG00000009939	-	97	65.351	ENSRNOG00000006420	Rbm38	94	65.198	Rattus_norvegicus
ENSAPOG00000009939	-	92	58.019	ENSRROG00000036388	-	88	56.604	Rhinopithecus_roxellana
ENSAPOG00000009939	-	94	68.018	ENSSBOG00000031053	RBM38	93	90.099	Saimiri_boliviensis_boliviensis
ENSAPOG00000009939	-	100	70.968	ENSSFOG00015004453	rbm38	100	72.996	Scleropages_formosus
ENSAPOG00000009939	-	100	67.589	ENSSDUG00000022611	rbm38	98	66.270	Seriola_dumerili
ENSAPOG00000009939	-	100	97.131	ENSSDUG00000021082	RBM38	100	97.131	Seriola_dumerili
ENSAPOG00000009939	-	100	97.131	ENSSLDG00000011778	RBM38	100	97.131	Seriola_lalandi_dorsalis
ENSAPOG00000009939	-	100	67.589	ENSSLDG00000010845	rbm38	98	66.270	Seriola_lalandi_dorsalis
ENSAPOG00000009939	-	100	66.535	ENSSPAG00000011113	rbm38	98	65.217	Stegastes_partitus
ENSAPOG00000009939	-	100	98.770	ENSSPAG00000020989	RBM38	100	98.770	Stegastes_partitus
ENSAPOG00000009939	-	94	68.468	ENSSSCG00000007504	RBM38	91	67.421	Sus_scrofa
ENSAPOG00000009939	-	98	64.634	ENSTRUG00000024954	rbm38	97	64.228	Takifugu_rubripes
ENSAPOG00000009939	-	100	88.980	ENSTRUG00000019869	-	100	88.980	Takifugu_rubripes
ENSAPOG00000009939	-	95	86.580	ENSTNIG00000007093	-	100	86.425	Tetraodon_nigroviridis
ENSAPOG00000009939	-	94	68.468	ENSUAMG00000019780	RBM38	91	67.713	Ursus_americanus
ENSAPOG00000009939	-	94	69.369	ENSVVUG00000017246	RBM38	91	68.018	Vulpes_vulpes
ENSAPOG00000009939	-	92	64.545	ENSXETG00000011268	rbm38	97	65.297	Xenopus_tropicalis
ENSAPOG00000009939	-	79	76.536	ENSXCOG00000017324	-	68	82.803	Xiphophorus_couchianus
ENSAPOG00000009939	-	100	61.753	ENSXMAG00000023662	rbm38	98	61.905	Xiphophorus_maculatus