EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000010086 (Gene tree)
Gene ID: 110957997
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 7884 bases
Position: chrMVNR01000572.1:314728-322611
Accession: 110957997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000008007	RRM_1	PF00076.22	1.3e-30	1	2
ENSAPOP00000008007	RRM_1	PF00076.22	1.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000003976	-	888	XM_022204266	ENSAPOP00000008007	295 (aa)	XP_022059958	-

Gene Model

Click here to download ENSAPOG00000010086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000010086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000010086	trnau1apb	64	30.460	ENSAPOG00000015534	tial1	75	30.319
ENSAPOG00000010086	trnau1apb	58	31.034	ENSAPOG00000001876	tia1	68	31.034
ENSAPOG00000010086	trnau1apb	95	44.932	ENSAPOG00000007148	TRNAU1AP	98	43.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000010086	trnau1apb	100	76.716	ENSACIG00000001863	trnau1apb	100	76.190	Amphilophus_citrinellus
ENSAPOG00000010086	trnau1apb	100	82.941	ENSAOCG00000011891	trnau1apb	100	81.176	Amphiprion_ocellaris
ENSAPOG00000010086	trnau1apb	100	88.629	ENSAPEG00000008029	trnau1apb	100	89.298	Amphiprion_percula
ENSAPOG00000010086	trnau1apb	100	80.294	ENSATEG00000002196	trnau1apb	100	78.529	Anabas_testudineus
ENSAPOG00000010086	trnau1apb	100	76.246	ENSACLG00000003016	trnau1apb	100	75.731	Astatotilapia_calliptera
ENSAPOG00000010086	trnau1apb	99	66.667	ENSAMXG00000001805	trnau1apb	99	63.823	Astyanax_mexicanus
ENSAPOG00000010086	trnau1apb	99	75.516	ENSCSEG00000018215	trnau1apb	99	69.912	Cynoglossus_semilaevis
ENSAPOG00000010086	trnau1apb	95	68.712	ENSCVAG00000017866	trnau1apb	100	71.779	Cyprinodon_variegatus
ENSAPOG00000010086	trnau1apb	100	61.747	ENSDARG00000056475	trnau1apb	98	65.409	Danio_rerio
ENSAPOG00000010086	trnau1apb	100	60.479	ENSELUG00000016683	trnau1apb	99	60.615	Esox_lucius
ENSAPOG00000010086	trnau1apb	100	76.676	ENSFHEG00000001267	trnau1apb	100	72.477	Fundulus_heteroclitus
ENSAPOG00000010086	trnau1apb	100	63.143	ENSGMOG00000001160	trnau1apb	100	67.160	Gadus_morhua
ENSAPOG00000010086	trnau1apb	60	94.944	ENSGAFG00000006770	trnau1apb	100	80.968	Gambusia_affinis
ENSAPOG00000010086	trnau1apb	100	73.235	ENSGACG00000014944	trnau1apb	100	73.235	Gasterosteus_aculeatus
ENSAPOG00000010086	trnau1apb	67	39.252	ENSGAGG00000022384	-	78	40.385	Gopherus_agassizii
ENSAPOG00000010086	trnau1apb	100	79.646	ENSHBUG00000018944	trnau1apb	99	76.991	Haplochromis_burtoni
ENSAPOG00000010086	trnau1apb	67	75.983	ENSHCOG00000011350	trnau1apb	78	74.897	Hippocampus_comes
ENSAPOG00000010086	trnau1apb	99	63.492	ENSIPUG00000008843	tsp1l	99	62.461	Ictalurus_punctatus
ENSAPOG00000010086	trnau1apb	72	83.645	ENSKMAG00000010082	trnau1apb	99	74.561	Kryptolebias_marmoratus
ENSAPOG00000010086	trnau1apb	100	72.537	ENSLBEG00000020480	trnau1apb	100	77.515	Labrus_bergylta
ENSAPOG00000010086	trnau1apb	100	53.474	ENSLOCG00000013175	trnau1apb	99	52.903	Lepisosteus_oculatus
ENSAPOG00000010086	trnau1apb	100	79.646	ENSMAMG00000012192	trnau1apb	100	77.581	Mastacembelus_armatus
ENSAPOG00000010086	trnau1apb	100	79.646	ENSMZEG00005014852	trnau1apb	99	76.991	Maylandia_zebra
ENSAPOG00000010086	trnau1apb	67	41.294	ENSMGAG00000003234	-	99	39.698	Meleagris_gallopavo
ENSAPOG00000010086	trnau1apb	96	69.118	ENSMMOG00000021521	trnau1apb	100	68.421	Mola_mola
ENSAPOG00000010086	trnau1apb	99	84.768	ENSMALG00000003772	trnau1apb	100	84.039	Monopterus_albus
ENSAPOG00000010086	trnau1apb	97	75.529	ENSNBRG00000000751	trnau1apb	99	75.000	Neolamprologus_brichardi
ENSAPOG00000010086	trnau1apb	99	77.333	ENSONIG00000016639	trnau1apb	100	76.846	Oreochromis_niloticus
ENSAPOG00000010086	trnau1apb	63	92.513	ENSORLG00000013265	trnau1apb	99	69.477	Oryzias_latipes
ENSAPOG00000010086	trnau1apb	100	77.485	ENSORLG00020004464	trnau1apb	99	69.883	Oryzias_latipes_hni
ENSAPOG00000010086	trnau1apb	100	76.901	ENSORLG00015021098	trnau1apb	99	75.942	Oryzias_latipes_hsok
ENSAPOG00000010086	trnau1apb	63	92.513	ENSOMEG00000016531	trnau1apb	99	74.419	Oryzias_melastigma
ENSAPOG00000010086	trnau1apb	60	82.682	ENSPKIG00000007995	trnau1apb	99	61.224	Paramormyrops_kingsleyae
ENSAPOG00000010086	trnau1apb	67	43.750	ENSPSIG00000004189	-	78	40.291	Pelodiscus_sinensis
ENSAPOG00000010086	trnau1apb	99	70.408	ENSPMGG00000018509	trnau1apb	62	93.258	Periophthalmus_magnuspinnatus
ENSAPOG00000010086	trnau1apb	100	76.176	ENSPFOG00000003938	trnau1apb	99	74.052	Poecilia_formosa
ENSAPOG00000010086	trnau1apb	100	75.872	ENSPLAG00000015480	trnau1apb	99	74.052	Poecilia_latipinna
ENSAPOG00000010086	trnau1apb	100	75.872	ENSPMEG00000012743	trnau1apb	99	74.052	Poecilia_mexicana
ENSAPOG00000010086	trnau1apb	100	75.291	ENSPREG00000015035	trnau1apb	99	73.178	Poecilia_reticulata
ENSAPOG00000010086	trnau1apb	100	73.607	ENSPNYG00000012127	trnau1apb	100	73.099	Pundamilia_nyererei
ENSAPOG00000010086	trnau1apb	99	64.444	ENSPNAG00000019138	trnau1apb	98	63.407	Pygocentrus_nattereri
ENSAPOG00000010086	trnau1apb	99	59.574	ENSSFOG00015014158	trnau1apb	99	59.878	Scleropages_formosus
ENSAPOG00000010086	trnau1apb	99	75.964	ENSSMAG00000001745	trnau1apb	99	75.964	Scophthalmus_maximus
ENSAPOG00000010086	trnau1apb	99	79.351	ENSSDUG00000011109	trnau1apb	99	77.581	Seriola_dumerili
ENSAPOG00000010086	trnau1apb	99	79.056	ENSSLDG00000012947	trnau1apb	99	77.286	Seriola_lalandi_dorsalis
ENSAPOG00000010086	trnau1apb	66	35.887	ENSSPUG00000016701	-	82	46.903	Sphenodon_punctatus
ENSAPOG00000010086	trnau1apb	100	82.166	ENSSPAG00000006917	trnau1apb	100	84.227	Stegastes_partitus
ENSAPOG00000010086	trnau1apb	100	75.000	ENSTRUG00000008608	trnau1apb	100	75.410	Takifugu_rubripes
ENSAPOG00000010086	trnau1apb	99	70.608	ENSTNIG00000000916	trnau1apb	100	67.532	Tetraodon_nigroviridis
ENSAPOG00000010086	trnau1apb	94	84.507	ENSXCOG00000007974	trnau1apb	94	82.332	Xiphophorus_couchianus
ENSAPOG00000010086	trnau1apb	100	76.453	ENSXMAG00000029918	trnau1apb	99	74.636	Xiphophorus_maculatus