EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000010223 (Gene tree)
Gene ID: 110956906
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 21280 bases
Position: chrMVNR01000502.1:376574-397853
Accession: 110956906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000008015	ResIII	PF04851.15	2.1e-26	1	2
ENSAPOP00000008015	ResIII	PF04851.15	2.1e-26	2	2
ENSAPOP00000008015	DEAD	PF00270.29	2.8e-54	1	2
ENSAPOP00000008015	DEAD	PF00270.29	2.8e-54	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000003963	-	11588	XM_022202663	ENSAPOP00000008015	2136 (aa)	XP_022058355	UPI000B9069F7

Gene Model

Click here to download ENSAPOG00000010223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000010223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000010223	snrnp200	65	31.672	ENSAPOG00000005304	hfm1	84	31.672

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000010223	snrnp200	99	90.777	ENSG00000144028	SNRNP200	99	90.888	Homo_sapiens
ENSAPOG00000010223	snrnp200	99	90.824	ENSAMEG00000008996	SNRNP200	99	90.935	Ailuropoda_melanoleuca
ENSAPOG00000010223	snrnp200	97	97.964	ENSACIG00000001764	snrnp200	98	97.964	Amphilophus_citrinellus
ENSAPOG00000010223	snrnp200	100	99.672	ENSAOCG00000024593	snrnp200	100	99.672	Amphiprion_ocellaris
ENSAPOG00000010223	snrnp200	97	98.928	ENSAPEG00000012554	snrnp200	100	98.928	Amphiprion_percula
ENSAPOG00000010223	snrnp200	100	98.970	ENSATEG00000022522	snrnp200	100	98.970	Anabas_testudineus
ENSAPOG00000010223	snrnp200	99	90.948	ENSAPLG00000004313	SNRNP200	99	91.012	Anas_platyrhynchos
ENSAPOG00000010223	snrnp200	99	89.930	ENSACAG00000000434	SNRNP200	100	89.930	Anolis_carolinensis
ENSAPOG00000010223	snrnp200	99	88.043	ENSANAG00000036625	SNRNP200	99	88.144	Aotus_nancymaae
ENSAPOG00000010223	snrnp200	100	97.800	ENSACLG00000011188	snrnp200	100	97.800	Astatotilapia_calliptera
ENSAPOG00000010223	snrnp200	99	94.734	ENSAMXG00000005684	snrnp200	99	94.734	Astyanax_mexicanus
ENSAPOG00000010223	snrnp200	99	90.590	ENSBTAG00000000848	SNRNP200	99	90.700	Bos_taurus
ENSAPOG00000010223	snrnp200	99	90.777	ENSCJAG00000007514	SNRNP200	99	90.888	Callithrix_jacchus
ENSAPOG00000010223	snrnp200	99	90.061	ENSCAFG00020019979	SNRNP200	99	91.974	Canis_lupus_dingo
ENSAPOG00000010223	snrnp200	99	90.543	ENSCHIG00000020611	SNRNP200	99	90.653	Capra_hircus
ENSAPOG00000010223	snrnp200	99	90.824	ENSTSYG00000010467	SNRNP200	99	90.935	Carlito_syrichta
ENSAPOG00000010223	snrnp200	99	90.315	ENSCAPG00000017234	SNRNP200	99	90.425	Cavia_aperea
ENSAPOG00000010223	snrnp200	99	90.637	ENSCPOG00000006776	SNRNP200	99	90.747	Cavia_porcellus
ENSAPOG00000010223	snrnp200	99	90.777	ENSCCAG00000033962	SNRNP200	99	90.888	Cebus_capucinus
ENSAPOG00000010223	snrnp200	99	90.777	ENSCATG00000015790	SNRNP200	99	90.888	Cercocebus_atys
ENSAPOG00000010223	snrnp200	99	90.684	ENSCLAG00000004116	SNRNP200	99	90.794	Chinchilla_lanigera
ENSAPOG00000010223	snrnp200	99	90.777	ENSCSAG00000017369	SNRNP200	99	90.888	Chlorocebus_sabaeus
ENSAPOG00000010223	snrnp200	73	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSAPOG00000010223	snrnp200	99	90.743	ENSCPBG00000022571	SNRNP200	99	95.000	Chrysemys_picta_bellii
ENSAPOG00000010223	snrnp200	99	75.735	ENSCING00000005082	-	99	75.972	Ciona_intestinalis
ENSAPOG00000010223	snrnp200	94	90.493	ENSCANG00000033932	SNRNP200	99	90.609	Colobus_angolensis_palliatus
ENSAPOG00000010223	snrnp200	99	90.777	ENSCGRG00001022610	Snrnp200	99	90.888	Cricetulus_griseus_chok1gshd
ENSAPOG00000010223	snrnp200	99	90.276	ENSCGRG00000016472	Snrnp200	99	90.385	Cricetulus_griseus_crigri
ENSAPOG00000010223	snrnp200	99	96.532	ENSCSEG00000016399	snrnp200	100	96.532	Cynoglossus_semilaevis
ENSAPOG00000010223	snrnp200	100	92.135	ENSCVAG00000017631	snrnp200	100	92.135	Cyprinodon_variegatus
ENSAPOG00000010223	snrnp200	100	94.476	ENSDARG00000077536	snrnp200	99	94.499	Danio_rerio
ENSAPOG00000010223	snrnp200	99	89.466	ENSDNOG00000011227	SNRNP200	99	89.573	Dasypus_novemcinctus
ENSAPOG00000010223	snrnp200	99	88.318	ENSDORG00000005861	Snrnp200	99	88.420	Dipodomys_ordii
ENSAPOG00000010223	snrnp200	100	73.976	FBgn0263599	l(3)72Ab	99	74.298	Drosophila_melanogaster
ENSAPOG00000010223	snrnp200	95	90.009	ENSETEG00000000162	SNRNP200	74	90.009	Echinops_telfairi
ENSAPOG00000010223	snrnp200	83	81.093	ENSEBUG00000016524	snrnp200	95	81.093	Eptatretus_burgeri
ENSAPOG00000010223	snrnp200	99	89.790	ENSEASG00005001884	SNRNP200	99	89.804	Equus_asinus_asinus
ENSAPOG00000010223	snrnp200	99	90.824	ENSECAG00000019675	SNRNP200	99	90.935	Equus_caballus
ENSAPOG00000010223	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSAPOG00000010223	snrnp200	100	96.584	ENSELUG00000018948	snrnp200	100	96.584	Esox_lucius
ENSAPOG00000010223	snrnp200	99	90.871	ENSFCAG00000010699	SNRNP200	99	90.982	Felis_catus
ENSAPOG00000010223	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSAPOG00000010223	snrnp200	99	90.590	ENSFDAG00000004683	SNRNP200	99	90.700	Fukomys_damarensis
ENSAPOG00000010223	snrnp200	100	94.663	ENSFHEG00000003786	snrnp200	100	94.663	Fundulus_heteroclitus
ENSAPOG00000010223	snrnp200	100	95.140	ENSGMOG00000004881	snrnp200	99	95.026	Gadus_morhua
ENSAPOG00000010223	snrnp200	100	94.944	ENSGAFG00000010807	snrnp200	100	94.944	Gambusia_affinis
ENSAPOG00000010223	snrnp200	100	97.711	ENSGACG00000011474	snrnp200	99	97.711	Gasterosteus_aculeatus
ENSAPOG00000010223	snrnp200	95	90.848	ENSGAGG00000016069	SNRNP200	97	98.387	Gopherus_agassizii
ENSAPOG00000010223	snrnp200	99	90.777	ENSGGOG00000005174	SNRNP200	99	90.888	Gorilla_gorilla
ENSAPOG00000010223	snrnp200	97	95.085	ENSHBUG00000011322	snrnp200	99	95.085	Haplochromis_burtoni
ENSAPOG00000010223	snrnp200	99	90.637	ENSHGLG00000006654	SNRNP200	99	90.747	Heterocephalus_glaber_female
ENSAPOG00000010223	snrnp200	99	90.637	ENSHGLG00100018594	SNRNP200	99	90.747	Heterocephalus_glaber_male
ENSAPOG00000010223	snrnp200	99	90.871	ENSSTOG00000016351	SNRNP200	99	90.982	Ictidomys_tridecemlineatus
ENSAPOG00000010223	snrnp200	99	90.543	ENSJJAG00000023659	Snrnp200	99	90.653	Jaculus_jaculus
ENSAPOG00000010223	snrnp200	100	94.774	ENSKMAG00000003665	snrnp200	100	94.774	Kryptolebias_marmoratus
ENSAPOG00000010223	snrnp200	100	98.221	ENSLBEG00000021585	snrnp200	100	98.221	Labrus_bergylta
ENSAPOG00000010223	snrnp200	82	92.092	ENSLACG00000000226	SNRNP200	99	92.224	Latimeria_chalumnae
ENSAPOG00000010223	snrnp200	100	94.200	ENSLOCG00000015198	snrnp200	99	94.223	Lepisosteus_oculatus
ENSAPOG00000010223	snrnp200	99	90.684	ENSLAFG00000015626	SNRNP200	99	90.794	Loxodonta_africana
ENSAPOG00000010223	snrnp200	99	90.730	ENSMFAG00000040174	SNRNP200	99	92.151	Macaca_fascicularis
ENSAPOG00000010223	snrnp200	99	90.730	ENSMMUG00000023261	SNRNP200	99	90.841	Macaca_mulatta
ENSAPOG00000010223	snrnp200	99	90.684	ENSMNEG00000032398	SNRNP200	99	90.794	Macaca_nemestrina
ENSAPOG00000010223	snrnp200	99	90.777	ENSMLEG00000019083	SNRNP200	99	92.151	Mandrillus_leucophaeus
ENSAPOG00000010223	snrnp200	100	97.660	ENSMAMG00000007851	snrnp200	100	97.660	Mastacembelus_armatus
ENSAPOG00000010223	snrnp200	97	95.085	ENSMZEG00005010787	snrnp200	99	95.085	Maylandia_zebra
ENSAPOG00000010223	snrnp200	97	90.566	ENSMGAG00000001831	SNRNP200	99	90.687	Meleagris_gallopavo
ENSAPOG00000010223	snrnp200	99	90.824	ENSMAUG00000011825	Snrnp200	99	90.935	Mesocricetus_auratus
ENSAPOG00000010223	snrnp200	99	90.824	ENSMICG00000004710	SNRNP200	99	90.935	Microcebus_murinus
ENSAPOG00000010223	snrnp200	99	88.998	ENSMOCG00000011814	Snrnp200	99	89.103	Microtus_ochrogaster
ENSAPOG00000010223	snrnp200	100	96.395	ENSMMOG00000014167	snrnp200	100	96.395	Mola_mola
ENSAPOG00000010223	snrnp200	99	90.777	ENSMODG00000008475	SNRNP200	99	90.841	Monodelphis_domestica
ENSAPOG00000010223	snrnp200	100	98.034	ENSMALG00000001973	snrnp200	100	98.034	Monopterus_albus
ENSAPOG00000010223	snrnp200	99	90.684	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.794	Mus_caroli
ENSAPOG00000010223	snrnp200	99	90.730	ENSMUSG00000003660	Snrnp200	99	90.841	Mus_musculus
ENSAPOG00000010223	snrnp200	99	90.730	MGP_PahariEiJ_G0025695	Snrnp200	99	90.841	Mus_pahari
ENSAPOG00000010223	snrnp200	99	90.730	MGP_SPRETEiJ_G0025170	Snrnp200	99	93.803	Mus_spretus
ENSAPOG00000010223	snrnp200	99	90.871	ENSMPUG00000008949	SNRNP200	99	90.982	Mustela_putorius_furo
ENSAPOG00000010223	snrnp200	99	87.594	ENSMLUG00000027511	-	99	87.694	Myotis_lucifugus
ENSAPOG00000010223	snrnp200	99	90.463	ENSMLUG00000010493	SNRNP200	99	90.572	Myotis_lucifugus
ENSAPOG00000010223	snrnp200	99	90.777	ENSNGAG00000021993	Snrnp200	99	90.888	Nannospalax_galili
ENSAPOG00000010223	snrnp200	90	97.678	ENSNBRG00000017960	snrnp200	98	97.678	Neolamprologus_brichardi
ENSAPOG00000010223	snrnp200	99	86.518	ENSNLEG00000000025	SNRNP200	99	86.707	Nomascus_leucogenys
ENSAPOG00000010223	snrnp200	99	94.845	ENSMEUG00000010532	SNRNP200	78	93.878	Notamacropus_eugenii
ENSAPOG00000010223	snrnp200	96	89.640	ENSOPRG00000015464	SNRNP200	99	87.553	Ochotona_princeps
ENSAPOG00000010223	snrnp200	99	90.684	ENSODEG00000008366	SNRNP200	99	90.794	Octodon_degus
ENSAPOG00000010223	snrnp200	100	97.800	ENSONIG00000010714	snrnp200	100	97.800	Oreochromis_niloticus
ENSAPOG00000010223	snrnp200	99	90.730	ENSOCUG00000009864	SNRNP200	99	90.841	Oryctolagus_cuniculus
ENSAPOG00000010223	snrnp200	99	96.532	ENSORLG00000012286	snrnp200	100	96.587	Oryzias_latipes
ENSAPOG00000010223	snrnp200	99	96.579	ENSORLG00020004648	snrnp200	100	96.579	Oryzias_latipes_hni
ENSAPOG00000010223	snrnp200	99	96.626	ENSORLG00015019114	snrnp200	100	96.626	Oryzias_latipes_hsok
ENSAPOG00000010223	snrnp200	100	96.957	ENSOMEG00000011834	snrnp200	100	96.957	Oryzias_melastigma
ENSAPOG00000010223	snrnp200	99	90.824	ENSOGAG00000006879	SNRNP200	99	90.935	Otolemur_garnettii
ENSAPOG00000010223	snrnp200	99	89.846	ENSOARG00000013949	SNRNP200	99	89.953	Ovis_aries
ENSAPOG00000010223	snrnp200	99	90.777	ENSPPAG00000041559	SNRNP200	99	90.888	Pan_paniscus
ENSAPOG00000010223	snrnp200	99	90.871	ENSPPRG00000004435	SNRNP200	99	90.982	Panthera_pardus
ENSAPOG00000010223	snrnp200	99	90.449	ENSPTIG00000006380	SNRNP200	99	90.559	Panthera_tigris_altaica
ENSAPOG00000010223	snrnp200	99	90.777	ENSPTRG00000012230	SNRNP200	99	90.888	Pan_troglodytes
ENSAPOG00000010223	snrnp200	99	90.730	ENSPANG00000006017	SNRNP200	99	90.841	Papio_anubis
ENSAPOG00000010223	snrnp200	100	95.321	ENSPKIG00000014762	snrnp200	99	95.403	Paramormyrops_kingsleyae
ENSAPOG00000010223	snrnp200	99	90.033	ENSPSIG00000008580	SNRNP200	99	90.094	Pelodiscus_sinensis
ENSAPOG00000010223	snrnp200	99	90.684	ENSPCIG00000023050	SNRNP200	99	90.747	Phascolarctos_cinereus
ENSAPOG00000010223	snrnp200	100	97.192	ENSPFOG00000015110	snrnp200	100	97.192	Poecilia_formosa
ENSAPOG00000010223	snrnp200	97	97.305	ENSPLAG00000006711	snrnp200	99	97.305	Poecilia_latipinna
ENSAPOG00000010223	snrnp200	97	97.305	ENSPMEG00000021166	snrnp200	99	97.305	Poecilia_mexicana
ENSAPOG00000010223	snrnp200	100	97.144	ENSPREG00000008875	snrnp200	100	97.144	Poecilia_reticulata
ENSAPOG00000010223	snrnp200	99	90.777	ENSPPYG00000012068	SNRNP200	99	90.888	Pongo_abelii
ENSAPOG00000010223	snrnp200	97	94.872	ENSPCAG00000008536	SNRNP200	85	97.872	Procavia_capensis
ENSAPOG00000010223	snrnp200	99	90.777	ENSPCOG00000024608	SNRNP200	99	90.888	Propithecus_coquereli
ENSAPOG00000010223	snrnp200	96	91.300	ENSPVAG00000005860	SNRNP200	92	91.546	Pteropus_vampyrus
ENSAPOG00000010223	snrnp200	100	92.997	ENSPNYG00000017476	snrnp200	100	92.997	Pundamilia_nyererei
ENSAPOG00000010223	snrnp200	100	90.641	ENSPNAG00000010998	snrnp200	99	90.695	Pygocentrus_nattereri
ENSAPOG00000010223	snrnp200	99	90.824	ENSRNOG00000012157	Snrnp200	99	90.935	Rattus_norvegicus
ENSAPOG00000010223	snrnp200	99	90.777	ENSRBIG00000044690	-	99	90.888	Rhinopithecus_bieti
ENSAPOG00000010223	snrnp200	99	90.777	ENSRROG00000037952	-	99	90.888	Rhinopithecus_roxellana
ENSAPOG00000010223	snrnp200	99	90.777	ENSSBOG00000035471	SNRNP200	99	90.888	Saimiri_boliviensis_boliviensis
ENSAPOG00000010223	snrnp200	97	90.518	ENSSHAG00000000758	SNRNP200	99	90.590	Sarcophilus_harrisii
ENSAPOG00000010223	snrnp200	99	95.489	ENSSFOG00015018826	snrnp200	99	95.489	Scleropages_formosus
ENSAPOG00000010223	snrnp200	100	98.455	ENSSMAG00000005463	snrnp200	100	98.455	Scophthalmus_maximus
ENSAPOG00000010223	snrnp200	100	99.251	ENSSDUG00000021410	snrnp200	100	99.251	Seriola_dumerili
ENSAPOG00000010223	snrnp200	100	98.970	ENSSLDG00000010884	snrnp200	100	98.970	Seriola_lalandi_dorsalis
ENSAPOG00000010223	snrnp200	95	88.740	ENSSARG00000010728	SNRNP200	96	88.710	Sorex_araneus
ENSAPOG00000010223	snrnp200	99	91.058	ENSSPUG00000003726	-	99	91.123	Sphenodon_punctatus
ENSAPOG00000010223	snrnp200	100	99.672	ENSSPAG00000001842	snrnp200	100	99.672	Stegastes_partitus
ENSAPOG00000010223	snrnp200	99	90.871	ENSSSCG00000008127	SNRNP200	99	90.982	Sus_scrofa
ENSAPOG00000010223	snrnp200	99	82.331	ENSTGUG00000014475	-	100	82.331	Taeniopygia_guttata
ENSAPOG00000010223	snrnp200	100	97.191	ENSTRUG00000001307	snrnp200	100	97.191	Takifugu_rubripes
ENSAPOG00000010223	snrnp200	99	85.040	ENSTNIG00000004320	snrnp200	100	85.040	Tetraodon_nigroviridis
ENSAPOG00000010223	snrnp200	82	93.427	ENSTBEG00000003329	-	67	93.427	Tupaia_belangeri
ENSAPOG00000010223	snrnp200	99	90.637	ENSTTRG00000004983	SNRNP200	99	90.747	Tursiops_truncatus
ENSAPOG00000010223	snrnp200	75	83.721	ENSUAMG00000008395	-	95	83.430	Ursus_americanus
ENSAPOG00000010223	snrnp200	99	90.871	ENSUMAG00000012385	SNRNP200	99	90.982	Ursus_maritimus
ENSAPOG00000010223	snrnp200	87	93.568	ENSVPAG00000006434	SNRNP200	66	93.568	Vicugna_pacos
ENSAPOG00000010223	snrnp200	99	90.659	ENSVVUG00000026247	SNRNP200	99	90.769	Vulpes_vulpes
ENSAPOG00000010223	snrnp200	99	90.412	ENSXETG00000001243	snrnp200	99	90.474	Xenopus_tropicalis
ENSAPOG00000010223	snrnp200	97	97.428	ENSXMAG00000002058	snrnp200	98	97.428	Xiphophorus_maculatus