EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000010604 (Gene tree)
Gene ID: 110953356
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 2521 bases
Position: chrMVNR01000291.1:7861-10381
Accession: 110953356
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000008468	CMS1	PF14617.6	2.3e-34	1	1
ENSAPOP00000008468	DEAD	PF00270.29	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000003208	-	744	XM_022197314	ENSAPOP00000008468	247 (aa)	XP_022053006	-

Gene Model

Click here to download ENSAPOG00000010604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000010604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000010604	cmss1	96	58.898	ENSG00000184220	CMSS1	98	62.500	Homo_sapiens
ENSAPOG00000010604	cmss1	82	64.039	ENSAMEG00000004092	CMSS1	78	64.039	Ailuropoda_melanoleuca
ENSAPOG00000010604	cmss1	97	66.540	ENSACIG00000021854	cmss1	83	73.094	Amphilophus_citrinellus
ENSAPOG00000010604	cmss1	89	89.520	ENSAOCG00000013361	cmss1	93	83.582	Amphiprion_ocellaris
ENSAPOG00000010604	cmss1	82	97.537	ENSAPEG00000005829	cmss1	90	88.168	Amphiprion_percula
ENSAPOG00000010604	cmss1	93	83.264	ENSATEG00000008209	cmss1	85	77.328	Anabas_testudineus
ENSAPOG00000010604	cmss1	96	60.759	ENSAPLG00000010542	CMSS1	88	63.366	Anas_platyrhynchos
ENSAPOG00000010604	cmss1	100	54.264	ENSACAG00000011065	CMSS1	74	63.861	Anolis_carolinensis
ENSAPOG00000010604	cmss1	82	63.366	ENSANAG00000023565	CMSS1	77	63.366	Aotus_nancymaae
ENSAPOG00000010604	cmss1	96	73.946	ENSACLG00000027294	cmss1	70	86.700	Astatotilapia_calliptera
ENSAPOG00000010604	cmss1	81	70.000	ENSAMXG00000002046	cmss1	69	70.443	Astyanax_mexicanus
ENSAPOG00000010604	cmss1	82	63.861	ENSBTAG00000013663	CMSS1	73	63.861	Bos_taurus
ENSAPOG00000010604	cmss1	82	64.356	ENSCJAG00000000610	CMSS1	77	64.356	Callithrix_jacchus
ENSAPOG00000010604	cmss1	82	64.851	ENSCAFG00000009230	CMSS1	73	64.851	Canis_familiaris
ENSAPOG00000010604	cmss1	77	66.138	ENSCAFG00020024156	-	63	62.871	Canis_lupus_dingo
ENSAPOG00000010604	cmss1	82	64.851	ENSCAFG00020009464	-	74	64.851	Canis_lupus_dingo
ENSAPOG00000010604	cmss1	99	57.490	ENSCHIG00000013003	CMSS1	73	64.356	Capra_hircus
ENSAPOG00000010604	cmss1	82	63.861	ENSTSYG00000009266	CMSS1	78	63.861	Carlito_syrichta
ENSAPOG00000010604	cmss1	77	56.085	ENSCAPG00000013584	CMSS1	88	56.085	Cavia_aperea
ENSAPOG00000010604	cmss1	95	60.000	ENSCPOG00000014680	CMSS1	72	65.347	Cavia_porcellus
ENSAPOG00000010604	cmss1	82	64.851	ENSCCAG00000034685	CMSS1	77	64.851	Cebus_capucinus
ENSAPOG00000010604	cmss1	82	64.851	ENSCATG00000031980	CMSS1	77	64.851	Cercocebus_atys
ENSAPOG00000010604	cmss1	81	63.500	ENSCLAG00000011241	CMSS1	87	63.861	Chinchilla_lanigera
ENSAPOG00000010604	cmss1	82	64.851	ENSCSAG00000006024	CMSS1	82	64.851	Chlorocebus_sabaeus
ENSAPOG00000010604	cmss1	81	46.500	ENSCHOG00000012098	CMSS1	73	47.030	Choloepus_hoffmanni
ENSAPOG00000010604	cmss1	78	42.857	ENSCING00000014848	-	96	44.444	Ciona_intestinalis
ENSAPOG00000010604	cmss1	51	44.444	ENSCSAVG00000002309	-	99	44.444	Ciona_savignyi
ENSAPOG00000010604	cmss1	82	64.851	ENSCANG00000031337	CMSS1	77	64.851	Colobus_angolensis_palliatus
ENSAPOG00000010604	cmss1	82	62.871	ENSCGRG00001014305	Cmss1	73	62.871	Cricetulus_griseus_chok1gshd
ENSAPOG00000010604	cmss1	99	55.870	ENSCGRG00000006722	Cmss1	79	62.871	Cricetulus_griseus_crigri
ENSAPOG00000010604	cmss1	82	82.266	ENSCSEG00000004958	cmss1	81	73.418	Cynoglossus_semilaevis
ENSAPOG00000010604	cmss1	93	72.835	ENSCVAG00000005039	cmss1	70	85.714	Cyprinodon_variegatus
ENSAPOG00000010604	cmss1	82	73.892	ENSDARG00000112579	cmss1	70	73.892	Danio_rerio
ENSAPOG00000010604	cmss1	94	59.052	ENSDNOG00000040418	CMSS1	73	63.861	Dasypus_novemcinctus
ENSAPOG00000010604	cmss1	81	64.000	ENSDORG00000010461	Cmss1	72	64.356	Dipodomys_ordii
ENSAPOG00000010604	cmss1	53	55.303	ENSEBUG00000002156	-	96	55.303	Eptatretus_burgeri
ENSAPOG00000010604	cmss1	96	57.203	ENSEASG00005010966	CMSS1	92	63.366	Equus_asinus_asinus
ENSAPOG00000010604	cmss1	81	63.000	ENSECAG00000015662	CMSS1	89	63.366	Equus_caballus
ENSAPOG00000010604	cmss1	81	44.000	ENSEEUG00000007624	-	73	44.554	Erinaceus_europaeus
ENSAPOG00000010604	cmss1	96	66.023	ENSELUG00000019459	cmss1	68	77.340	Esox_lucius
ENSAPOG00000010604	cmss1	81	65.000	ENSFCAG00000044577	CMSS1	72	65.347	Felis_catus
ENSAPOG00000010604	cmss1	96	59.494	ENSFALG00000005816	CMSS1	85	62.376	Ficedula_albicollis
ENSAPOG00000010604	cmss1	82	65.347	ENSFDAG00000012577	CMSS1	89	65.347	Fukomys_damarensis
ENSAPOG00000010604	cmss1	91	80.889	ENSFHEG00000012008	cmss1	84	85.714	Fundulus_heteroclitus
ENSAPOG00000010604	cmss1	97	70.980	ENSGMOG00000016729	cmss1	73	80.296	Gadus_morhua
ENSAPOG00000010604	cmss1	82	64.356	ENSGALG00000015267	CMSS1	77	64.356	Gallus_gallus
ENSAPOG00000010604	cmss1	98	74.621	ENSGAFG00000021217	cmss1	77	84.729	Gambusia_affinis
ENSAPOG00000010604	cmss1	99	72.519	ENSGACG00000002798	cmss1	73	81.281	Gasterosteus_aculeatus
ENSAPOG00000010604	cmss1	100	57.031	ENSGAGG00000019861	CMSS1	79	65.347	Gopherus_agassizii
ENSAPOG00000010604	cmss1	96	59.322	ENSGGOG00000014125	CMSS1	77	64.356	Gorilla_gorilla
ENSAPOG00000010604	cmss1	96	73.462	ENSHBUG00000008431	cmss1	90	73.462	Haplochromis_burtoni
ENSAPOG00000010604	cmss1	81	64.500	ENSHGLG00000019481	CMSS1	82	64.851	Heterocephalus_glaber_female
ENSAPOG00000010604	cmss1	81	64.500	ENSHGLG00100010314	CMSS1	81	64.851	Heterocephalus_glaber_male
ENSAPOG00000010604	cmss1	93	70.356	ENSHCOG00000003222	cmss1	79	71.368	Hippocampus_comes
ENSAPOG00000010604	cmss1	97	66.260	ENSIPUG00000011591	cmss1	70	74.384	Ictalurus_punctatus
ENSAPOG00000010604	cmss1	99	56.680	ENSSTOG00000019366	CMSS1	73	62.871	Ictidomys_tridecemlineatus
ENSAPOG00000010604	cmss1	100	56.917	ENSJJAG00000014894	Cmss1	90	64.851	Jaculus_jaculus
ENSAPOG00000010604	cmss1	99	69.919	ENSKMAG00000002390	cmss1	82	74.384	Kryptolebias_marmoratus
ENSAPOG00000010604	cmss1	97	74.793	ENSLBEG00000006298	cmss1	83	81.373	Labrus_bergylta
ENSAPOG00000010604	cmss1	82	65.842	ENSLACG00000009293	CMSS1	88	65.842	Latimeria_chalumnae
ENSAPOG00000010604	cmss1	82	62.871	ENSLOCG00000009391	cmss1	83	56.356	Lepisosteus_oculatus
ENSAPOG00000010604	cmss1	81	63.000	ENSLAFG00000017509	CMSS1	89	63.366	Loxodonta_africana
ENSAPOG00000010604	cmss1	82	64.356	ENSMFAG00000045006	CMSS1	77	64.356	Macaca_fascicularis
ENSAPOG00000010604	cmss1	82	63.861	ENSMMUG00000002939	CMSS1	85	64.583	Macaca_mulatta
ENSAPOG00000010604	cmss1	82	64.356	ENSMNEG00000031315	CMSS1	77	64.356	Macaca_nemestrina
ENSAPOG00000010604	cmss1	82	64.356	ENSMLEG00000033660	CMSS1	77	64.356	Mandrillus_leucophaeus
ENSAPOG00000010604	cmss1	99	76.667	ENSMAMG00000017176	cmss1	70	90.148	Mastacembelus_armatus
ENSAPOG00000010604	cmss1	96	73.946	ENSMZEG00005021886	cmss1	70	86.700	Maylandia_zebra
ENSAPOG00000010604	cmss1	82	64.356	ENSMGAG00000014360	CMSS1	89	64.356	Meleagris_gallopavo
ENSAPOG00000010604	cmss1	82	44.554	ENSMAUG00000020609	Cmss1	66	44.554	Mesocricetus_auratus
ENSAPOG00000010604	cmss1	100	56.349	ENSMICG00000048977	CMSS1	78	65.347	Microcebus_murinus
ENSAPOG00000010604	cmss1	92	58.974	ENSMOCG00000021937	Cmss1	73	63.366	Microtus_ochrogaster
ENSAPOG00000010604	cmss1	95	81.857	ENSMMOG00000019794	cmss1	84	85.714	Mola_mola
ENSAPOG00000010604	cmss1	82	64.356	ENSMODG00000002275	CMSS1	76	64.356	Monodelphis_domestica
ENSAPOG00000010604	cmss1	96	76.718	ENSMALG00000004250	cmss1	70	88.670	Monopterus_albus
ENSAPOG00000010604	cmss1	92	60.000	MGP_CAROLIEiJ_G0020824	Cmss1	73	65.347	Mus_caroli
ENSAPOG00000010604	cmss1	92	59.149	ENSMUSG00000022748	Cmss1	73	64.356	Mus_musculus
ENSAPOG00000010604	cmss1	99	56.972	MGP_PahariEiJ_G0016524	Cmss1	73	64.851	Mus_pahari
ENSAPOG00000010604	cmss1	92	59.149	MGP_SPRETEiJ_G0021724	Cmss1	73	64.356	Mus_spretus
ENSAPOG00000010604	cmss1	81	63.819	ENSMPUG00000011324	CMSS1	78	64.179	Mustela_putorius_furo
ENSAPOG00000010604	cmss1	99	57.831	ENSMLUG00000001131	CMSS1	78	64.216	Myotis_lucifugus
ENSAPOG00000010604	cmss1	99	56.275	ENSNGAG00000020316	Cmss1	72	62.871	Nannospalax_galili
ENSAPOG00000010604	cmss1	96	73.563	ENSNBRG00000003095	cmss1	70	86.207	Neolamprologus_brichardi
ENSAPOG00000010604	cmss1	98	59.504	ENSNLEG00000034172	CMSS1	77	64.851	Nomascus_leucogenys
ENSAPOG00000010604	cmss1	82	53.960	ENSMEUG00000014505	CMSS1	89	53.960	Notamacropus_eugenii
ENSAPOG00000010604	cmss1	93	59.565	ENSOPRG00000002986	CMSS1	73	64.356	Ochotona_princeps
ENSAPOG00000010604	cmss1	82	62.376	ENSODEG00000003558	-	75	62.376	Octodon_degus
ENSAPOG00000010604	cmss1	81	64.500	ENSODEG00000005226	-	72	64.851	Octodon_degus
ENSAPOG00000010604	cmss1	82	54.950	ENSODEG00000009446	-	78	54.950	Octodon_degus
ENSAPOG00000010604	cmss1	82	55.446	ENSODEG00000001853	-	71	55.446	Octodon_degus
ENSAPOG00000010604	cmss1	96	73.946	ENSONIG00000006678	cmss1	78	86.700	Oreochromis_niloticus
ENSAPOG00000010604	cmss1	100	55.952	ENSOANG00000007529	CMSS1	87	62.376	Ornithorhynchus_anatinus
ENSAPOG00000010604	cmss1	93	60.000	ENSOCUG00000025366	CMSS1	73	64.356	Oryctolagus_cuniculus
ENSAPOG00000010604	cmss1	96	72.093	ENSORLG00000020340	cmss1	71	83.251	Oryzias_latipes
ENSAPOG00000010604	cmss1	96	69.620	ENSORLG00020012235	cmss1	86	74.384	Oryzias_latipes_hni
ENSAPOG00000010604	cmss1	97	63.158	ENSORLG00015015551	cmss1	76	73.892	Oryzias_latipes_hsok
ENSAPOG00000010604	cmss1	96	73.359	ENSOMEG00000012555	cmss1	70	84.729	Oryzias_melastigma
ENSAPOG00000010604	cmss1	82	64.851	ENSOGAG00000002045	CMSS1	89	64.851	Otolemur_garnettii
ENSAPOG00000010604	cmss1	99	57.258	ENSOARG00000017899	CMSS1	70	64.039	Ovis_aries
ENSAPOG00000010604	cmss1	96	59.322	ENSPPAG00000038515	CMSS1	74	64.356	Pan_paniscus
ENSAPOG00000010604	cmss1	81	65.000	ENSPPRG00000016767	CMSS1	72	65.347	Panthera_pardus
ENSAPOG00000010604	cmss1	81	64.500	ENSPTIG00000018274	CMSS1	72	64.851	Panthera_tigris_altaica
ENSAPOG00000010604	cmss1	96	59.322	ENSPTRG00000015157	CMSS1	82	64.356	Pan_troglodytes
ENSAPOG00000010604	cmss1	82	64.851	ENSPANG00000019980	CMSS1	80	64.851	Papio_anubis
ENSAPOG00000010604	cmss1	100	62.222	ENSPKIG00000012609	cmss1	82	65.812	Paramormyrops_kingsleyae
ENSAPOG00000010604	cmss1	82	65.842	ENSPSIG00000003849	CMSS1	88	65.842	Pelodiscus_sinensis
ENSAPOG00000010604	cmss1	82	81.863	ENSPMGG00000010286	cmss1	88	81.863	Periophthalmus_magnuspinnatus
ENSAPOG00000010604	cmss1	99	60.163	ENSPEMG00000016384	Cmss1	72	64.851	Peromyscus_maniculatus_bairdii
ENSAPOG00000010604	cmss1	83	50.980	ENSPMAG00000001146	cmss1	99	51.232	Petromyzon_marinus
ENSAPOG00000010604	cmss1	97	57.551	ENSPCIG00000015656	CMSS1	77	63.861	Phascolarctos_cinereus
ENSAPOG00000010604	cmss1	96	71.648	ENSPFOG00000016849	cmss1	94	71.642	Poecilia_formosa
ENSAPOG00000010604	cmss1	96	71.264	ENSPLAG00000008323	cmss1	94	71.269	Poecilia_latipinna
ENSAPOG00000010604	cmss1	96	72.031	ENSPMEG00000021020	cmss1	94	67.778	Poecilia_mexicana
ENSAPOG00000010604	cmss1	96	72.031	ENSPREG00000007618	cmss1	69	82.759	Poecilia_reticulata
ENSAPOG00000010604	cmss1	96	59.322	ENSPPYG00000013606	CMSS1	74	64.356	Pongo_abelii
ENSAPOG00000010604	cmss1	100	57.600	ENSPCOG00000020035	CMSS1	78	64.851	Propithecus_coquereli
ENSAPOG00000010604	cmss1	81	52.500	ENSPVAG00000017031	CMSS1	72	52.970	Pteropus_vampyrus
ENSAPOG00000010604	cmss1	85	72.766	ENSPNYG00000013428	cmss1	65	87.006	Pundamilia_nyererei
ENSAPOG00000010604	cmss1	82	70.936	ENSPNAG00000007912	cmss1	69	70.936	Pygocentrus_nattereri
ENSAPOG00000010604	cmss1	92	59.149	ENSRNOG00000027888	Cmss1	79	64.356	Rattus_norvegicus
ENSAPOG00000010604	cmss1	82	64.356	ENSRBIG00000037931	CMSS1	77	64.356	Rhinopithecus_bieti
ENSAPOG00000010604	cmss1	82	64.356	ENSRROG00000042910	CMSS1	77	64.356	Rhinopithecus_roxellana
ENSAPOG00000010604	cmss1	82	64.356	ENSSBOG00000030980	CMSS1	77	64.356	Saimiri_boliviensis_boliviensis
ENSAPOG00000010604	cmss1	82	64.851	ENSSHAG00000009321	CMSS1	80	64.851	Sarcophilus_harrisii
ENSAPOG00000010604	cmss1	82	75.862	ENSSFOG00015001509	cmss1	90	63.602	Scleropages_formosus
ENSAPOG00000010604	cmss1	93	75.099	ENSSMAG00000001653	cmss1	82	76.151	Scophthalmus_maximus
ENSAPOG00000010604	cmss1	96	78.626	ENSSDUG00000007719	cmss1	70	92.118	Seriola_dumerili
ENSAPOG00000010604	cmss1	96	78.148	ENSSLDG00000012300	cmss1	68	91.133	Seriola_lalandi_dorsalis
ENSAPOG00000010604	cmss1	99	46.964	ENSSARG00000003584	CMSS1	72	51.485	Sorex_araneus
ENSAPOG00000010604	cmss1	82	61.881	ENSSPUG00000003865	CMSS1	89	61.881	Sphenodon_punctatus
ENSAPOG00000010604	cmss1	100	85.441	ENSSPAG00000019182	cmss1	63	93.596	Stegastes_partitus
ENSAPOG00000010604	cmss1	81	63.000	ENSSSCG00000011970	CMSS1	72	63.366	Sus_scrofa
ENSAPOG00000010604	cmss1	96	59.494	ENSTGUG00000013635	CMSS1	88	62.871	Taeniopygia_guttata
ENSAPOG00000010604	cmss1	93	75.397	ENSTRUG00000015265	cmss1	72	84.729	Takifugu_rubripes
ENSAPOG00000010604	cmss1	82	76.355	ENSTNIG00000002880	cmss1	74	76.355	Tetraodon_nigroviridis
ENSAPOG00000010604	cmss1	82	45.050	ENSTBEG00000016722	CMSS1	72	45.050	Tupaia_belangeri
ENSAPOG00000010604	cmss1	82	62.376	ENSTTRG00000001562	CMSS1	72	62.376	Tursiops_truncatus
ENSAPOG00000010604	cmss1	82	64.851	ENSUAMG00000024209	CMSS1	91	64.851	Ursus_americanus
ENSAPOG00000010604	cmss1	82	64.851	ENSUMAG00000001983	CMSS1	78	64.851	Ursus_maritimus
ENSAPOG00000010604	cmss1	65	63.750	ENSVPAG00000000263	CMSS1	57	63.750	Vicugna_pacos
ENSAPOG00000010604	cmss1	82	63.861	ENSVVUG00000007776	-	80	63.861	Vulpes_vulpes
ENSAPOG00000010604	cmss1	81	64.500	ENSVVUG00000021647	-	82	64.851	Vulpes_vulpes
ENSAPOG00000010604	cmss1	82	61.576	ENSXETG00000011858	cmss1	73	61.576	Xenopus_tropicalis
ENSAPOG00000010604	cmss1	100	73.162	ENSXCOG00000018724	cmss1	70	84.236	Xiphophorus_couchianus
ENSAPOG00000010604	cmss1	98	73.034	ENSXMAG00000011243	cmss1	76	84.236	Xiphophorus_maculatus