EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000010679 (Gene tree)
Gene ID: 110972888
Gene Symbol: ptcd1
Alias: wu:fi36d06
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 9416 bases
Position: chrMVNR01004862.1:13507-22922
Accession: 110972888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000008556	PPR	PF01535.20	3.2e-16	1	2
ENSAPOP00000008556	PPR	PF01535.20	3.2e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000003087	-	4139	XM_022223267	ENSAPOP00000008556	635 (aa)	XP_022078959	-

Gene Model

Click here to download ENSAPOG00000010679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000010679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000010679	ptcd1	85	46.237	ENSG00000106246	PTCD1	81	45.709	Homo_sapiens
ENSAPOG00000010679	ptcd1	85	46.237	ENSG00000248919	ATP5MF-PTCD1	75	45.709	Homo_sapiens
ENSAPOG00000010679	ptcd1	85	48.142	ENSAMEG00000006224	-	74	48.142	Ailuropoda_melanoleuca
ENSAPOG00000010679	ptcd1	90	72.109	ENSACIG00000017861	ptcd1	86	72.109	Amphilophus_citrinellus
ENSAPOG00000010679	ptcd1	96	87.319	ENSAOCG00000020741	-	89	87.319	Amphiprion_ocellaris
ENSAPOG00000010679	ptcd1	99	86.822	ENSAOCG00000022617	ptcd1	98	86.822	Amphiprion_ocellaris
ENSAPOG00000010679	ptcd1	96	87.480	ENSAPEG00000022632	ptcd1	89	87.480	Amphiprion_percula
ENSAPOG00000010679	ptcd1	96	67.036	ENSATEG00000007016	ptcd1	88	67.512	Anabas_testudineus
ENSAPOG00000010679	ptcd1	85	47.038	ENSAPLG00000006862	-	89	46.329	Anas_platyrhynchos
ENSAPOG00000010679	ptcd1	88	46.141	ENSACAG00000012871	-	76	46.141	Anolis_carolinensis
ENSAPOG00000010679	ptcd1	88	44.975	ENSANAG00000035790	-	83	45.904	Aotus_nancymaae
ENSAPOG00000010679	ptcd1	96	68.396	ENSACLG00000002824	ptcd1	88	68.396	Astatotilapia_calliptera
ENSAPOG00000010679	ptcd1	85	50.947	ENSAMXG00000037292	ptcd1	85	51.463	Astyanax_mexicanus
ENSAPOG00000010679	ptcd1	90	45.130	ENSBTAG00000020440	-	75	46.242	Bos_taurus
ENSAPOG00000010679	ptcd1	85	47.237	ENSCJAG00000015815	-	81	46.771	Callithrix_jacchus
ENSAPOG00000010679	ptcd1	89	46.823	ENSCAFG00000015055	-	78	46.823	Canis_familiaris
ENSAPOG00000010679	ptcd1	89	46.912	ENSCAFG00020014480	-	78	46.823	Canis_lupus_dingo
ENSAPOG00000010679	ptcd1	85	48.474	ENSCHIG00000027000	-	79	48.654	Capra_hircus
ENSAPOG00000010679	ptcd1	85	47.227	ENSTSYG00000029495	-	81	46.491	Carlito_syrichta
ENSAPOG00000010679	ptcd1	88	46.077	ENSCAPG00000014660	-	90	46.077	Cavia_aperea
ENSAPOG00000010679	ptcd1	88	46.745	ENSCPOG00000001780	-	84	46.745	Cavia_porcellus
ENSAPOG00000010679	ptcd1	85	47.865	ENSCCAG00000034025	-	81	46.724	Cebus_capucinus
ENSAPOG00000010679	ptcd1	85	46.869	ENSCATG00000040859	-	80	46.737	Cercocebus_atys
ENSAPOG00000010679	ptcd1	87	47.222	ENSCLAG00000006354	-	81	47.396	Chinchilla_lanigera
ENSAPOG00000010679	ptcd1	85	46.786	ENSCSAG00000017794	-	82	46.797	Chlorocebus_sabaeus
ENSAPOG00000010679	ptcd1	88	45.499	ENSCPBG00000020866	-	81	45.813	Chrysemys_picta_bellii
ENSAPOG00000010679	ptcd1	87	45.979	ENSCANG00000023441	-	81	46.154	Colobus_angolensis_palliatus
ENSAPOG00000010679	ptcd1	91	45.395	ENSCGRG00001023686	Ptcd1	86	45.395	Cricetulus_griseus_chok1gshd
ENSAPOG00000010679	ptcd1	90	45.380	ENSCGRG00000015031	Ptcd1	85	45.380	Cricetulus_griseus_crigri
ENSAPOG00000010679	ptcd1	96	56.220	ENSCSEG00000002378	ptcd1	88	56.850	Cynoglossus_semilaevis
ENSAPOG00000010679	ptcd1	87	70.270	ENSCVAG00000015826	ptcd1	79	70.270	Cyprinodon_variegatus
ENSAPOG00000010679	ptcd1	87	69.550	ENSCVAG00000003621	ptcd1	84	69.550	Cyprinodon_variegatus
ENSAPOG00000010679	ptcd1	85	53.546	ENSDARG00000076176	ptcd1	81	53.546	Danio_rerio
ENSAPOG00000010679	ptcd1	85	47.090	ENSDNOG00000009957	-	85	45.280	Dasypus_novemcinctus
ENSAPOG00000010679	ptcd1	87	46.783	ENSDORG00000000740	Ptcd1	82	46.783	Dipodomys_ordii
ENSAPOG00000010679	ptcd1	61	51.546	ENSEBUG00000014515	ptcd1	69	51.546	Eptatretus_burgeri
ENSAPOG00000010679	ptcd1	91	46.216	ENSEASG00005002480	-	86	46.764	Equus_asinus_asinus
ENSAPOG00000010679	ptcd1	91	46.129	ENSECAG00000016617	-	89	46.935	Equus_caballus
ENSAPOG00000010679	ptcd1	85	57.193	ENSELUG00000016517	ptcd1	77	57.193	Esox_lucius
ENSAPOG00000010679	ptcd1	90	45.603	ENSFCAG00000015069	-	86	45.440	Felis_catus
ENSAPOG00000010679	ptcd1	85	46.820	ENSFALG00000013803	-	80	46.690	Ficedula_albicollis
ENSAPOG00000010679	ptcd1	87	48.517	ENSFDAG00000006393	-	81	48.517	Fukomys_damarensis
ENSAPOG00000010679	ptcd1	75	70.084	ENSFHEG00000012491	ptcd1	83	70.084	Fundulus_heteroclitus
ENSAPOG00000010679	ptcd1	84	60.512	ENSGMOG00000007639	ptcd1	87	60.512	Gadus_morhua
ENSAPOG00000010679	ptcd1	86	46.564	ENSGALG00000004711	-	84	45.681	Gallus_gallus
ENSAPOG00000010679	ptcd1	96	63.857	ENSGAFG00000013175	ptcd1	88	63.857	Gambusia_affinis
ENSAPOG00000010679	ptcd1	86	70.072	ENSGACG00000016607	ptcd1	86	70.072	Gasterosteus_aculeatus
ENSAPOG00000010679	ptcd1	86	47.173	ENSGAGG00000021832	-	85	47.173	Gopherus_agassizii
ENSAPOG00000010679	ptcd1	85	46.237	ENSGGOG00000015123	-	81	45.709	Gorilla_gorilla
ENSAPOG00000010679	ptcd1	96	68.239	ENSHBUG00000018275	ptcd1	88	68.239	Haplochromis_burtoni
ENSAPOG00000010679	ptcd1	87	47.972	ENSHGLG00000017621	-	81	47.469	Heterocephalus_glaber_female
ENSAPOG00000010679	ptcd1	87	47.972	ENSHGLG00100007218	-	81	47.469	Heterocephalus_glaber_male
ENSAPOG00000010679	ptcd1	96	54.976	ENSHCOG00000010784	ptcd1	89	55.678	Hippocampus_comes
ENSAPOG00000010679	ptcd1	86	48.007	ENSSTOG00000001682	-	80	47.917	Ictidomys_tridecemlineatus
ENSAPOG00000010679	ptcd1	88	47.297	ENSJJAG00000000319	Ptcd1	85	47.039	Jaculus_jaculus
ENSAPOG00000010679	ptcd1	96	63.981	ENSKMAG00000008708	ptcd1	88	64.613	Kryptolebias_marmoratus
ENSAPOG00000010679	ptcd1	96	64.561	ENSLBEG00000008061	ptcd1	89	65.023	Labrus_bergylta
ENSAPOG00000010679	ptcd1	88	47.818	ENSLACG00000011172	ptcd1	81	47.818	Latimeria_chalumnae
ENSAPOG00000010679	ptcd1	85	50.694	ENSLOCG00000004833	ptcd1	87	50.270	Lepisosteus_oculatus
ENSAPOG00000010679	ptcd1	86	46.341	ENSLAFG00000002588	-	86	45.425	Loxodonta_africana
ENSAPOG00000010679	ptcd1	85	47.048	ENSMFAG00000041324	-	80	46.914	Macaca_fascicularis
ENSAPOG00000010679	ptcd1	85	46.869	ENSMMUG00000030408	-	80	46.737	Macaca_mulatta
ENSAPOG00000010679	ptcd1	85	47.048	ENSMNEG00000043786	-	80	46.914	Macaca_nemestrina
ENSAPOG00000010679	ptcd1	85	34.307	ENSMLEG00000031179	-	77	35.791	Mandrillus_leucophaeus
ENSAPOG00000010679	ptcd1	96	65.409	ENSMAMG00000007623	ptcd1	88	65.409	Mastacembelus_armatus
ENSAPOG00000010679	ptcd1	96	68.239	ENSMZEG00005012722	ptcd1	88	68.239	Maylandia_zebra
ENSAPOG00000010679	ptcd1	87	45.302	ENSMGAG00000004211	-	77	45.302	Meleagris_gallopavo
ENSAPOG00000010679	ptcd1	85	45.259	ENSMICG00000017428	-	79	46.071	Microcebus_murinus
ENSAPOG00000010679	ptcd1	96	68.025	ENSMMOG00000020243	ptcd1	86	73.418	Mola_mola
ENSAPOG00000010679	ptcd1	88	44.728	ENSMODG00000001350	-	80	44.728	Monodelphis_domestica
ENSAPOG00000010679	ptcd1	96	67.192	ENSMALG00000018442	ptcd1	88	67.192	Monopterus_albus
ENSAPOG00000010679	ptcd1	91	45.124	MGP_CAROLIEiJ_G0028011	Ptcd1	86	45.124	Mus_caroli
ENSAPOG00000010679	ptcd1	91	44.628	ENSMUSG00000029624	Ptcd1	86	45.124	Mus_musculus
ENSAPOG00000010679	ptcd1	85	47.143	MGP_PahariEiJ_G0024580	Ptcd1	80	47.143	Mus_pahari
ENSAPOG00000010679	ptcd1	91	44.959	MGP_SPRETEiJ_G0029012	Ptcd1	86	45.124	Mus_spretus
ENSAPOG00000010679	ptcd1	91	46.166	ENSMPUG00000016518	-	86	46.982	Mustela_putorius_furo
ENSAPOG00000010679	ptcd1	85	49.376	ENSMLUG00000010994	-	81	47.002	Myotis_lucifugus
ENSAPOG00000010679	ptcd1	96	67.031	ENSNBRG00000010079	ptcd1	92	67.031	Neolamprologus_brichardi
ENSAPOG00000010679	ptcd1	75	45.161	ENSNLEG00000011060	-	83	45.161	Nomascus_leucogenys
ENSAPOG00000010679	ptcd1	87	46.233	ENSMEUG00000006930	-	83	46.233	Notamacropus_eugenii
ENSAPOG00000010679	ptcd1	73	57.658	ENSOPRG00000013647	-	69	59.459	Ochotona_princeps
ENSAPOG00000010679	ptcd1	85	69.287	ENSONIG00000003168	ptcd1	90	69.287	Oreochromis_niloticus
ENSAPOG00000010679	ptcd1	93	44.246	ENSOANG00000007728	-	81	44.019	Ornithorhynchus_anatinus
ENSAPOG00000010679	ptcd1	85	47.048	ENSOCUG00000010584	-	80	46.115	Oryctolagus_cuniculus
ENSAPOG00000010679	ptcd1	96	64.355	ENSORLG00000009275	ptcd1	91	64.355	Oryzias_latipes
ENSAPOG00000010679	ptcd1	96	64.620	ENSORLG00020000988	ptcd1	91	64.620	Oryzias_latipes_hni
ENSAPOG00000010679	ptcd1	96	63.898	ENSORLG00015010557	ptcd1	91	63.898	Oryzias_latipes_hsok
ENSAPOG00000010679	ptcd1	96	64.630	ENSOMEG00000020627	ptcd1	92	64.630	Oryzias_melastigma
ENSAPOG00000010679	ptcd1	85	45.115	ENSOGAG00000010877	-	81	44.834	Otolemur_garnettii
ENSAPOG00000010679	ptcd1	85	44.170	ENSOARG00000018676	-	79	44.346	Ovis_aries
ENSAPOG00000010679	ptcd1	85	46.416	ENSPPAG00000036024	-	81	45.884	Pan_paniscus
ENSAPOG00000010679	ptcd1	89	46.179	ENSPPRG00000003478	-	85	46.179	Panthera_pardus
ENSAPOG00000010679	ptcd1	85	46.595	ENSPTRG00000019452	-	81	46.060	Pan_troglodytes
ENSAPOG00000010679	ptcd1	85	47.227	ENSPANG00000016730	-	80	47.090	Papio_anubis
ENSAPOG00000010679	ptcd1	85	50.991	ENSPKIG00000014215	ptcd1	80	50.991	Paramormyrops_kingsleyae
ENSAPOG00000010679	ptcd1	86	45.760	ENSPSIG00000011184	-	95	46.643	Pelodiscus_sinensis
ENSAPOG00000010679	ptcd1	77	38.178	ENSPMAG00000009667	ptcd1	99	38.178	Petromyzon_marinus
ENSAPOG00000010679	ptcd1	86	45.299	ENSPCIG00000024778	-	78	45.299	Phascolarctos_cinereus
ENSAPOG00000010679	ptcd1	96	61.958	ENSPFOG00000004458	ptcd1	88	62.440	Poecilia_formosa
ENSAPOG00000010679	ptcd1	96	62.480	ENSPLAG00000011051	ptcd1	88	62.641	Poecilia_latipinna
ENSAPOG00000010679	ptcd1	96	62.600	ENSPMEG00000020547	ptcd1	88	62.921	Poecilia_mexicana
ENSAPOG00000010679	ptcd1	95	62.783	ENSPREG00000000059	ptcd1	88	62.783	Poecilia_reticulata
ENSAPOG00000010679	ptcd1	87	45.280	ENSPPYG00000017377	-	86	45.280	Pongo_abelii
ENSAPOG00000010679	ptcd1	74	54.167	ENSPCAG00000001852	-	76	54.167	Procavia_capensis
ENSAPOG00000010679	ptcd1	85	46.751	ENSPCOG00000018596	-	81	46.655	Propithecus_coquereli
ENSAPOG00000010679	ptcd1	62	51.186	ENSPVAG00000007529	-	63	51.186	Pteropus_vampyrus
ENSAPOG00000010679	ptcd1	96	67.767	ENSPNYG00000019993	ptcd1	88	67.767	Pundamilia_nyererei
ENSAPOG00000010679	ptcd1	91	50.822	ENSPNAG00000014931	ptcd1	90	49.921	Pygocentrus_nattereri
ENSAPOG00000010679	ptcd1	88	46.552	ENSRNOG00000000987	Ptcd1	84	46.552	Rattus_norvegicus
ENSAPOG00000010679	ptcd1	87	45.804	ENSRBIG00000043393	-	81	45.979	Rhinopithecus_bieti
ENSAPOG00000010679	ptcd1	87	46.341	ENSRROG00000036420	-	81	46.516	Rhinopithecus_roxellana
ENSAPOG00000010679	ptcd1	88	45.215	ENSSBOG00000024114	-	80	46.379	Saimiri_boliviensis_boliviensis
ENSAPOG00000010679	ptcd1	85	46.942	ENSSHAG00000011376	-	84	47.027	Sarcophilus_harrisii
ENSAPOG00000010679	ptcd1	86	51.489	ENSSFOG00015007909	ptcd1	77	51.664	Scleropages_formosus
ENSAPOG00000010679	ptcd1	85	65.642	ENSSMAG00000000218	ptcd1	87	65.823	Scophthalmus_maximus
ENSAPOG00000010679	ptcd1	96	67.963	ENSSDUG00000015671	ptcd1	93	67.963	Seriola_dumerili
ENSAPOG00000010679	ptcd1	96	67.652	ENSSLDG00000014261	ptcd1	91	67.652	Seriola_lalandi_dorsalis
ENSAPOG00000010679	ptcd1	88	45.410	ENSSPUG00000003540	-	82	45.470	Sphenodon_punctatus
ENSAPOG00000010679	ptcd1	96	75.197	ENSSPAG00000011049	ptcd1	88	75.355	Stegastes_partitus
ENSAPOG00000010679	ptcd1	85	48.663	ENSSSCG00000007622	-	87	47.692	Sus_scrofa
ENSAPOG00000010679	ptcd1	86	46.181	ENSTGUG00000007563	-	91	46.454	Taeniopygia_guttata
ENSAPOG00000010679	ptcd1	96	62.323	ENSTRUG00000013471	ptcd1	88	62.323	Takifugu_rubripes
ENSAPOG00000010679	ptcd1	90	66.667	ENSTNIG00000008271	ptcd1	86	66.667	Tetraodon_nigroviridis
ENSAPOG00000010679	ptcd1	90	44.462	ENSTBEG00000011021	-	88	44.462	Tupaia_belangeri
ENSAPOG00000010679	ptcd1	85	46.726	ENSTTRG00000003006	-	79	47.266	Tursiops_truncatus
ENSAPOG00000010679	ptcd1	85	47.090	ENSUAMG00000008049	-	79	47.443	Ursus_americanus
ENSAPOG00000010679	ptcd1	89	46.656	ENSVVUG00000008836	-	84	46.656	Vulpes_vulpes
ENSAPOG00000010679	ptcd1	85	46.098	ENSXETG00000009891	ptcd1	80	46.098	Xenopus_tropicalis
ENSAPOG00000010679	ptcd1	96	64.355	ENSXMAG00000015540	ptcd1	88	64.355	Xiphophorus_maculatus