EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000010823 (Gene tree)
Gene ID: 110949315
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 45485 bases
Position: chrMVNR01000102.1:841461-886945
Accession: 110949315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000008654	Tudor-knot	PF11717.8	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000002879	-	6376	XM_022191276	ENSAPOP00000008654	1303 (aa)	XP_022046968	UPI000B8EEF20
ENSAPOT00000002891	-	6193	XM_022191278	ENSAPOP00000008644	1242 (aa)	XP_022046970	UPI000B900EF3

Gene Model

Click here to download ENSAPOG00000010823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000010823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000010823	tomm20a	87	75.728	ENSG00000054267	ARID4B	85	75.728	Homo_sapiens
ENSAPOG00000010823	tomm20a	93	93.381	ENSACIG00000006313	tomm20a	100	93.381	Amphilophus_citrinellus
ENSAPOG00000010823	tomm20a	100	97.929	ENSAOCG00000003330	tomm20a	100	97.929	Amphiprion_ocellaris
ENSAPOG00000010823	tomm20a	100	97.853	ENSAPEG00000024018	tomm20a	100	97.853	Amphiprion_percula
ENSAPOG00000010823	tomm20a	100	89.542	ENSATEG00000014930	tomm20a	100	90.153	Anabas_testudineus
ENSAPOG00000010823	tomm20a	52	60.979	ENSACAG00000001289	ARID4B	99	51.808	Anolis_carolinensis
ENSAPOG00000010823	tomm20a	66	75.485	ENSANAG00000038088	ARID4B	92	60.846	Aotus_nancymaae
ENSAPOG00000010823	tomm20a	93	84.051	ENSACLG00000023521	tomm20a	100	84.304	Astatotilapia_calliptera
ENSAPOG00000010823	tomm20a	83	77.966	ENSAMXG00000003657	tomm20a	91	77.240	Astyanax_mexicanus
ENSAPOG00000010823	tomm20a	54	59.867	ENSBTAG00000000222	ARID4B	54	60.905	Bos_taurus
ENSAPOG00000010823	tomm20a	54	60.671	ENSCAFG00000011439	ARID4B	99	53.027	Canis_familiaris
ENSAPOG00000010823	tomm20a	53	60.109	ENSCAFG00020027130	ARID4B	99	52.678	Canis_lupus_dingo
ENSAPOG00000010823	tomm20a	99	51.004	ENSCPOG00000034766	ARID4B	99	52.079	Cavia_porcellus
ENSAPOG00000010823	tomm20a	66	75.485	ENSCCAG00000021520	ARID4B	92	60.218	Cebus_capucinus
ENSAPOG00000010823	tomm20a	100	51.552	ENSCLAG00000003255	ARID4B	99	52.971	Chinchilla_lanigera
ENSAPOG00000010823	tomm20a	52	58.267	ENSCPBG00000004501	ARID4B	99	51.906	Chrysemys_picta_bellii
ENSAPOG00000010823	tomm20a	99	83.127	ENSCSEG00000012928	tomm20a	99	84.288	Cynoglossus_semilaevis
ENSAPOG00000010823	tomm20a	100	83.333	ENSCVAG00000003244	tomm20a	100	84.174	Cyprinodon_variegatus
ENSAPOG00000010823	tomm20a	100	65.758	ENSDARG00000090656	tomm20a	99	66.846	Danio_rerio
ENSAPOG00000010823	tomm20a	87	63.539	ENSETEG00000005596	ARID4B	89	63.003	Echinops_telfairi
ENSAPOG00000010823	tomm20a	64	57.160	ENSELUG00000018441	tomm20a	91	56.608	Esox_lucius
ENSAPOG00000010823	tomm20a	100	51.291	ENSFALG00000013548	ARID4B	97	51.855	Ficedula_albicollis
ENSAPOG00000010823	tomm20a	100	84.639	ENSFHEG00000003798	tomm20a	100	84.563	Fundulus_heteroclitus
ENSAPOG00000010823	tomm20a	90	77.255	ENSGMOG00000018747	tomm20a	91	77.255	Gadus_morhua
ENSAPOG00000010823	tomm20a	99	82.273	ENSGACG00000004298	tomm20a	100	82.803	Gasterosteus_aculeatus
ENSAPOG00000010823	tomm20a	100	89.441	ENSHBUG00000020369	tomm20a	100	89.977	Haplochromis_burtoni
ENSAPOG00000010823	tomm20a	95	85.839	ENSHCOG00000010376	tomm20a	100	84.749	Hippocampus_comes
ENSAPOG00000010823	tomm20a	100	64.124	ENSIPUG00000014234	arid4b	99	64.395	Ictalurus_punctatus
ENSAPOG00000010823	tomm20a	91	79.275	ENSKMAG00000010987	tomm20a	98	79.404	Kryptolebias_marmoratus
ENSAPOG00000010823	tomm20a	100	61.073	ENSLOCG00000015899	tomm20a	99	62.375	Lepisosteus_oculatus
ENSAPOG00000010823	tomm20a	53	60.298	ENSLAFG00000014295	ARID4B	99	52.349	Loxodonta_africana
ENSAPOG00000010823	tomm20a	93	89.811	ENSMAMG00000017134	tomm20a	99	90.099	Mastacembelus_armatus
ENSAPOG00000010823	tomm20a	100	89.288	ENSMZEG00005009879	tomm20a	100	89.824	Maylandia_zebra
ENSAPOG00000010823	tomm20a	54	59.342	ENSMGAG00000011896	ARID4B	99	51.334	Meleagris_gallopavo
ENSAPOG00000010823	tomm20a	53	61.944	ENSMICG00000016358	ARID4B	55	61.172	Microcebus_murinus
ENSAPOG00000010823	tomm20a	93	90.153	ENSMMOG00000000561	tomm20a	98	89.059	Mola_mola
ENSAPOG00000010823	tomm20a	100	50.853	ENSMODG00000008417	ARID4B	99	51.662	Monodelphis_domestica
ENSAPOG00000010823	tomm20a	100	90.115	ENSMALG00000005205	tomm20a	100	90.651	Monopterus_albus
ENSAPOG00000010823	tomm20a	100	52.790	ENSNGAG00000014629	Arid4b	99	52.924	Nannospalax_galili
ENSAPOG00000010823	tomm20a	93	89.858	ENSNBRG00000019684	tomm20a	100	92.217	Neolamprologus_brichardi
ENSAPOG00000010823	tomm20a	100	51.722	ENSODEG00000005373	ARID4B	99	53.015	Octodon_degus
ENSAPOG00000010823	tomm20a	53	60.408	ENSOCUG00000006605	ARID4B	54	60.739	Oryctolagus_cuniculus
ENSAPOG00000010823	tomm20a	100	81.255	ENSORLG00000012510	tomm20a	100	81.069	Oryzias_latipes
ENSAPOG00000010823	tomm20a	92	85.106	ENSORLG00020013988	tomm20a	100	87.264	Oryzias_latipes_hni
ENSAPOG00000010823	tomm20a	92	85.511	ENSORLG00015022835	tomm20a	100	87.204	Oryzias_latipes_hsok
ENSAPOG00000010823	tomm20a	100	82.249	ENSOMEG00000000521	tomm20a	100	82.096	Oryzias_melastigma
ENSAPOG00000010823	tomm20a	54	60.671	ENSPPRG00000013739	ARID4B	99	52.670	Panthera_pardus
ENSAPOG00000010823	tomm20a	54	60.267	ENSPTIG00000012520	ARID4B	99	53.042	Panthera_tigris_altaica
ENSAPOG00000010823	tomm20a	52	80.451	ENSPMGG00000001596	tomm20a	89	81.203	Periophthalmus_magnuspinnatus
ENSAPOG00000010823	tomm20a	94	70.346	ENSPCIG00000029756	ARID4B	99	52.819	Phascolarctos_cinereus
ENSAPOG00000010823	tomm20a	100	84.574	ENSPFOG00000019430	tomm20a	100	85.258	Poecilia_formosa
ENSAPOG00000010823	tomm20a	100	84.422	ENSPLAG00000010554	tomm20a	100	85.106	Poecilia_latipinna
ENSAPOG00000010823	tomm20a	100	82.440	ENSPMEG00000003093	tomm20a	100	79.318	Poecilia_mexicana
ENSAPOG00000010823	tomm20a	100	83.854	ENSPREG00000007996	tomm20a	100	85.301	Poecilia_reticulata
ENSAPOG00000010823	tomm20a	100	51.302	ENSPVAG00000015159	ARID4B	99	51.082	Pteropus_vampyrus
ENSAPOG00000010823	tomm20a	99	82.862	ENSPNYG00000013988	tomm20a	100	82.632	Pundamilia_nyererei
ENSAPOG00000010823	tomm20a	100	68.318	ENSPNAG00000000523	tomm20a	92	68.473	Pygocentrus_nattereri
ENSAPOG00000010823	tomm20a	87	46.982	ENSRNOG00000016391	LOC100912163	96	48.087	Rattus_norvegicus
ENSAPOG00000010823	tomm20a	90	73.399	ENSRBIG00000042029	ARID4B	96	48.875	Rhinopithecus_bieti
ENSAPOG00000010823	tomm20a	53	60.782	ENSSHAG00000015214	ARID4B	99	51.375	Sarcophilus_harrisii
ENSAPOG00000010823	tomm20a	100	61.754	ENSSFOG00015000132	arid4b	99	62.653	Scleropages_formosus
ENSAPOG00000010823	tomm20a	76	50.994	ENSSFOG00015008923	tomm20a	98	52.546	Scleropages_formosus
ENSAPOG00000010823	tomm20a	100	87.247	ENSSMAG00000010430	tomm20a	100	88.972	Scophthalmus_maximus
ENSAPOG00000010823	tomm20a	100	93.180	ENSSDUG00000003019	tomm20a	100	93.180	Seriola_dumerili
ENSAPOG00000010823	tomm20a	100	51.846	ENSSPUG00000015466	ARID4B	97	51.811	Sphenodon_punctatus
ENSAPOG00000010823	tomm20a	100	95.785	ENSSPAG00000007358	tomm20a	100	95.785	Stegastes_partitus
ENSAPOG00000010823	tomm20a	69	76.180	ENSTRUG00000002893	tomm20a	100	76.264	Takifugu_rubripes
ENSAPOG00000010823	tomm20a	69	68.796	ENSTBEG00000003961	ARID4B	66	68.550	Tupaia_belangeri
ENSAPOG00000010823	tomm20a	100	51.937	ENSTTRG00000002228	ARID4B	99	51.801	Tursiops_truncatus
ENSAPOG00000010823	tomm20a	52	58.299	ENSVVUG00000008154	ARID4B	98	51.551	Vulpes_vulpes
ENSAPOG00000010823	tomm20a	100	50.329	ENSXETG00000024651	arid4b	89	58.914	Xenopus_tropicalis
ENSAPOG00000010823	tomm20a	100	86.305	ENSXMAG00000006538	tomm20a	100	85.692	Xiphophorus_maculatus