EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000010842 (Gene tree)
Gene ID: 110956232
Gene Symbol: pabpc1l
Alias: fi20g03|wu:fi20g03|zgc:55855
Full Name: embryonic polyadenylate-binding protein-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 11693 bases
Position: chrMVNR01000454.1:87646-99338
Accession: 110956232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000008628	PABP	PF00658.18	1.2e-28	1	1
ENSAPOP00000008628	RRM_5	PF13893.6	1.8e-10	1	2
ENSAPOP00000008628	RRM_5	PF13893.6	1.8e-10	2	2
ENSAPOP00000008628	RRM_1	PF00076.22	2.2e-89	1	4
ENSAPOP00000008628	RRM_1	PF00076.22	2.2e-89	2	4
ENSAPOP00000008628	RRM_1	PF00076.22	2.2e-89	3	4
ENSAPOP00000008628	RRM_1	PF00076.22	2.2e-89	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000002922	-	1842	XM_022201572	ENSAPOP00000008628	613 (aa)	XP_022057264	-

Gene Model

Click here to download ENSAPOG00000010842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000010842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000010842	pabpc1l	66	31.429	ENSAPOG00000023888	ncl	52	31.429
ENSAPOG00000010842	pabpc1l	99	64.603	ENSAPOG00000001161	pabpc4	97	65.434
ENSAPOG00000010842	pabpc1l	58	30.645	ENSAPOG00000002277	elavl1a	87	30.052
ENSAPOG00000010842	pabpc1l	58	37.975	ENSAPOG00000001912	-	99	32.967
ENSAPOG00000010842	pabpc1l	99	66.932	ENSAPOG00000015105	pabpc1a	98	66.932
ENSAPOG00000010842	pabpc1l	100	66.933	ENSAPOG00000017776	pabpc1b	99	66.880
ENSAPOG00000010842	pabpc1l	61	34.737	ENSAPOG00000014215	rbms2b	54	34.737
ENSAPOG00000010842	pabpc1l	54	35.616	ENSAPOG00000006015	celf3a	67	35.616
ENSAPOG00000010842	pabpc1l	62	43.373	ENSAPOG00000000306	rbm39b	69	45.333
ENSAPOG00000010842	pabpc1l	50	35.616	ENSAPOG00000019202	si:dkey-205h23.2	63	35.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000010842	pabpc1l	99	66.348	ENSG00000101104	PABPC1L	98	76.543	Homo_sapiens
ENSAPOG00000010842	pabpc1l	98	62.946	ENSAMEG00000004099	PABPC1L	99	63.101	Ailuropoda_melanoleuca
ENSAPOG00000010842	pabpc1l	98	88.350	ENSACIG00000021004	-	99	88.350	Amphilophus_citrinellus
ENSAPOG00000010842	pabpc1l	99	91.479	ENSAOCG00000006167	-	99	91.479	Amphiprion_ocellaris
ENSAPOG00000010842	pabpc1l	99	90.453	ENSAPEG00000010558	-	94	97.789	Amphiprion_percula
ENSAPOG00000010842	pabpc1l	99	82.476	ENSATEG00000007428	pabpc1l	99	82.476	Anabas_testudineus
ENSAPOG00000010842	pabpc1l	98	68.387	ENSAPLG00000008415	PABPC1L	99	68.539	Anas_platyrhynchos
ENSAPOG00000010842	pabpc1l	99	70.317	ENSACAG00000011841	PABPC1L	99	70.111	Anolis_carolinensis
ENSAPOG00000010842	pabpc1l	99	66.720	ENSANAG00000026826	PABPC1L	98	66.667	Aotus_nancymaae
ENSAPOG00000010842	pabpc1l	99	84.084	ENSACLG00000024791	pabpc1l	99	84.084	Astatotilapia_calliptera
ENSAPOG00000010842	pabpc1l	99	75.962	ENSAMXG00000013552	pabpc1l	99	75.962	Astyanax_mexicanus
ENSAPOG00000010842	pabpc1l	66	63.309	ENSBTAG00000016849	PABPC1L	85	63.309	Bos_taurus
ENSAPOG00000010842	pabpc1l	59	86.310	ENSBTAG00000055300	-	100	86.310	Bos_taurus
ENSAPOG00000010842	pabpc1l	60	78.161	ENSCJAG00000038506	-	100	78.161	Callithrix_jacchus
ENSAPOG00000010842	pabpc1l	99	66.880	ENSCJAG00000017628	PABPC1L	99	66.720	Callithrix_jacchus
ENSAPOG00000010842	pabpc1l	99	62.597	ENSCAFG00000009573	PABPC1L	100	61.824	Canis_familiaris
ENSAPOG00000010842	pabpc1l	99	66.345	ENSCAFG00020013828	PABPC1L	99	66.345	Canis_lupus_dingo
ENSAPOG00000010842	pabpc1l	97	67.881	ENSCHIG00000025759	PABPC1L	91	67.715	Capra_hircus
ENSAPOG00000010842	pabpc1l	99	65.920	ENSTSYG00000006645	PABPC1L	99	65.440	Carlito_syrichta
ENSAPOG00000010842	pabpc1l	98	60.949	ENSCAPG00000014519	PABPC1L	98	59.640	Cavia_aperea
ENSAPOG00000010842	pabpc1l	99	63.840	ENSCPOG00000013633	PABPC1L	99	62.658	Cavia_porcellus
ENSAPOG00000010842	pabpc1l	99	65.869	ENSCCAG00000023338	PABPC1L	99	66.507	Cebus_capucinus
ENSAPOG00000010842	pabpc1l	99	66.986	ENSCATG00000034065	PABPC1L	99	66.879	Cercocebus_atys
ENSAPOG00000010842	pabpc1l	98	62.600	ENSCLAG00000005298	PABPC1L	98	63.446	Chinchilla_lanigera
ENSAPOG00000010842	pabpc1l	99	66.826	ENSCSAG00000014242	PABPC1L	99	66.720	Chlorocebus_sabaeus
ENSAPOG00000010842	pabpc1l	56	82.443	ENSCPBG00000007810	-	91	82.443	Chrysemys_picta_bellii
ENSAPOG00000010842	pabpc1l	72	77.376	ENSCPBG00000017755	-	99	77.376	Chrysemys_picta_bellii
ENSAPOG00000010842	pabpc1l	75	62.393	ENSCING00000002796	-	80	60.684	Ciona_intestinalis
ENSAPOG00000010842	pabpc1l	99	56.082	ENSCSAVG00000003102	-	100	83.221	Ciona_savignyi
ENSAPOG00000010842	pabpc1l	99	58.946	ENSCSAVG00000004246	-	89	71.523	Ciona_savignyi
ENSAPOG00000010842	pabpc1l	99	64.308	ENSCANG00000037530	PABPC1L	99	63.893	Colobus_angolensis_palliatus
ENSAPOG00000010842	pabpc1l	98	60.447	ENSCGRG00001021938	Pabpc1l	98	60.287	Cricetulus_griseus_chok1gshd
ENSAPOG00000010842	pabpc1l	98	60.447	ENSCGRG00000007946	Pabpc1l	98	60.287	Cricetulus_griseus_crigri
ENSAPOG00000010842	pabpc1l	99	73.970	ENSCSEG00000021295	pabpc1l	93	84.055	Cynoglossus_semilaevis
ENSAPOG00000010842	pabpc1l	99	82.097	ENSCVAG00000015943	-	99	95.420	Cyprinodon_variegatus
ENSAPOG00000010842	pabpc1l	99	75.362	ENSDARG00000002597	pabpc1l	88	93.846	Danio_rerio
ENSAPOG00000010842	pabpc1l	99	67.367	ENSDNOG00000048450	PABPC1L	99	67.205	Dasypus_novemcinctus
ENSAPOG00000010842	pabpc1l	99	64.744	ENSDORG00000001067	Pabpc1l	99	64.583	Dipodomys_ordii
ENSAPOG00000010842	pabpc1l	95	76.423	ENSETEG00000009969	PABPC1L	73	76.423	Echinops_telfairi
ENSAPOG00000010842	pabpc1l	51	73.885	ENSEASG00005023407	-	63	73.885	Equus_asinus_asinus
ENSAPOG00000010842	pabpc1l	59	83.929	ENSEASG00005023408	-	100	83.929	Equus_asinus_asinus
ENSAPOG00000010842	pabpc1l	66	68.889	ENSECAG00000040139	-	81	68.889	Equus_caballus
ENSAPOG00000010842	pabpc1l	99	63.871	ENSEEUG00000005978	PABPC1L	99	64.355	Erinaceus_europaeus
ENSAPOG00000010842	pabpc1l	99	76.000	ENSELUG00000001811	pabpc1l	99	76.000	Esox_lucius
ENSAPOG00000010842	pabpc1l	99	67.203	ENSFCAG00000011692	PABPC1L	99	67.311	Felis_catus
ENSAPOG00000010842	pabpc1l	85	70.315	ENSFALG00000005372	PABPC1L	93	69.259	Ficedula_albicollis
ENSAPOG00000010842	pabpc1l	98	63.948	ENSFDAG00000008291	PABPC1L	98	63.430	Fukomys_damarensis
ENSAPOG00000010842	pabpc1l	99	83.845	ENSFHEG00000003398	pabpc1l	99	83.845	Fundulus_heteroclitus
ENSAPOG00000010842	pabpc1l	99	79.032	ENSGMOG00000004437	pabpc1l	99	78.812	Gadus_morhua
ENSAPOG00000010842	pabpc1l	86	76.019	ENSGALG00000004123	PABPC1L	99	77.619	Gallus_gallus
ENSAPOG00000010842	pabpc1l	99	78.168	ENSGAFG00000021057	pabpc1l	99	78.168	Gambusia_affinis
ENSAPOG00000010842	pabpc1l	99	81.701	ENSGACG00000002792	pabpc1l	99	81.701	Gasterosteus_aculeatus
ENSAPOG00000010842	pabpc1l	99	70.447	ENSGAGG00000000589	PABPC1L	98	70.447	Gopherus_agassizii
ENSAPOG00000010842	pabpc1l	99	66.348	ENSGGOG00000004584	PABPC1L	99	66.561	Gorilla_gorilla
ENSAPOG00000010842	pabpc1l	99	83.762	ENSHBUG00000006134	pabpc1l	99	83.762	Haplochromis_burtoni
ENSAPOG00000010842	pabpc1l	98	64.573	ENSHGLG00000008434	PABPC1L	98	64.412	Heterocephalus_glaber_female
ENSAPOG00000010842	pabpc1l	98	64.573	ENSHGLG00100012151	PABPC1L	98	64.412	Heterocephalus_glaber_male
ENSAPOG00000010842	pabpc1l	59	84.831	ENSHGLG00100019506	-	100	84.831	Heterocephalus_glaber_male
ENSAPOG00000010842	pabpc1l	99	81.104	ENSHCOG00000009270	pabpc1l	99	80.602	Hippocampus_comes
ENSAPOG00000010842	pabpc1l	60	57.789	ENSIPUG00000006780	-	96	57.789	Ictalurus_punctatus
ENSAPOG00000010842	pabpc1l	60	60.894	ENSIPUG00000006760	-	90	60.894	Ictalurus_punctatus
ENSAPOG00000010842	pabpc1l	99	74.400	ENSIPUG00000012602	pabpc1l	99	74.400	Ictalurus_punctatus
ENSAPOG00000010842	pabpc1l	99	66.506	ENSSTOG00000003739	PABPC1L	99	66.990	Ictidomys_tridecemlineatus
ENSAPOG00000010842	pabpc1l	98	52.050	ENSJJAG00000022406	Pabpc1l	98	50.560	Jaculus_jaculus
ENSAPOG00000010842	pabpc1l	99	81.643	ENSKMAG00000016847	pabpc1l	100	81.643	Kryptolebias_marmoratus
ENSAPOG00000010842	pabpc1l	99	82.637	ENSLBEG00000010084	pabpc1l	99	82.637	Labrus_bergylta
ENSAPOG00000010842	pabpc1l	99	69.051	ENSLACG00000005762	PABPC1L	99	70.826	Latimeria_chalumnae
ENSAPOG00000010842	pabpc1l	99	75.241	ENSLOCG00000007519	pabpc1l	98	75.241	Lepisosteus_oculatus
ENSAPOG00000010842	pabpc1l	99	65.506	ENSLAFG00000003553	PABPC1L	99	65.348	Loxodonta_africana
ENSAPOG00000010842	pabpc1l	99	67.040	ENSMFAG00000040365	PABPC1L	98	67.040	Macaca_fascicularis
ENSAPOG00000010842	pabpc1l	99	67.360	ENSMNEG00000032298	PABPC1L	98	66.880	Macaca_nemestrina
ENSAPOG00000010842	pabpc1l	99	66.986	ENSMLEG00000043139	PABPC1L	99	66.879	Mandrillus_leucophaeus
ENSAPOG00000010842	pabpc1l	99	81.833	ENSMAMG00000011854	pabpc1l	100	81.833	Mastacembelus_armatus
ENSAPOG00000010842	pabpc1l	99	84.084	ENSMZEG00005023713	pabpc1l	99	84.084	Maylandia_zebra
ENSAPOG00000010842	pabpc1l	99	70.353	ENSMGAG00000003674	PABPC1L	99	70.353	Meleagris_gallopavo
ENSAPOG00000010842	pabpc1l	98	60.064	ENSMOCG00000013186	Pabpc1l	98	59.744	Microtus_ochrogaster
ENSAPOG00000010842	pabpc1l	99	81.230	ENSMMOG00000020574	-	90	94.615	Mola_mola
ENSAPOG00000010842	pabpc1l	94	68.601	ENSMODG00000016198	PABPC1L	99	69.154	Monodelphis_domestica
ENSAPOG00000010842	pabpc1l	97	82.450	ENSMALG00000021622	pabpc1l	100	82.450	Monopterus_albus
ENSAPOG00000010842	pabpc1l	98	60.510	MGP_CAROLIEiJ_G0024627	Pabpc1l	99	60.191	Mus_caroli
ENSAPOG00000010842	pabpc1l	98	60.256	ENSMUSG00000054582	Pabpc1l	99	59.936	Mus_musculus
ENSAPOG00000010842	pabpc1l	98	60.350	MGP_PahariEiJ_G0026071	Pabpc1l	99	60.577	Mus_pahari
ENSAPOG00000010842	pabpc1l	98	60.510	MGP_SPRETEiJ_G0025549	Pabpc1l	99	60.191	Mus_spretus
ENSAPOG00000010842	pabpc1l	99	66.506	ENSMPUG00000017646	PABPC1L	99	66.774	Mustela_putorius_furo
ENSAPOG00000010842	pabpc1l	98	64.434	ENSMLUG00000006324	PABPC1L	98	64.434	Myotis_lucifugus
ENSAPOG00000010842	pabpc1l	99	61.746	ENSNGAG00000010458	Pabpc1l	98	61.844	Nannospalax_galili
ENSAPOG00000010842	pabpc1l	99	84.466	ENSNBRG00000016633	pabpc1l	99	84.580	Neolamprologus_brichardi
ENSAPOG00000010842	pabpc1l	89	63.196	ENSMEUG00000007905	-	89	63.196	Notamacropus_eugenii
ENSAPOG00000010842	pabpc1l	99	65.120	ENSOPRG00000011846	PABPC1L	99	64.960	Ochotona_princeps
ENSAPOG00000010842	pabpc1l	98	60.826	ENSODEG00000015482	PABPC1L	98	60.826	Octodon_degus
ENSAPOG00000010842	pabpc1l	58	78.750	ENSODEG00000002920	-	97	78.750	Octodon_degus
ENSAPOG00000010842	pabpc1l	99	84.084	ENSONIG00000017314	pabpc1l	99	84.084	Oreochromis_niloticus
ENSAPOG00000010842	pabpc1l	89	60.247	ENSOANG00000015793	-	100	60.071	Ornithorhynchus_anatinus
ENSAPOG00000010842	pabpc1l	99	63.761	ENSOCUG00000003005	PABPC1L	99	64.024	Oryctolagus_cuniculus
ENSAPOG00000010842	pabpc1l	99	86.473	ENSORLG00000010322	pabpc1l	99	86.473	Oryzias_latipes
ENSAPOG00000010842	pabpc1l	99	86.473	ENSORLG00020021193	pabpc1l	99	86.473	Oryzias_latipes_hni
ENSAPOG00000010842	pabpc1l	99	81.068	ENSORLG00015017018	pabpc1l	99	86.473	Oryzias_latipes_hsok
ENSAPOG00000010842	pabpc1l	99	77.573	ENSOMEG00000010789	pabpc1l	99	77.573	Oryzias_melastigma
ENSAPOG00000010842	pabpc1l	99	66.029	ENSOGAG00000032999	PABPC1L	99	66.029	Otolemur_garnettii
ENSAPOG00000010842	pabpc1l	99	66.452	ENSOARG00000004578	PABPC1L	99	66.613	Ovis_aries
ENSAPOG00000010842	pabpc1l	99	66.188	ENSPPAG00000039677	PABPC1L	99	66.401	Pan_paniscus
ENSAPOG00000010842	pabpc1l	63	66.975	ENSPPRG00000019327	-	98	66.975	Panthera_pardus
ENSAPOG00000010842	pabpc1l	99	67.044	ENSPTIG00000006524	PABPC1L	99	67.044	Panthera_tigris_altaica
ENSAPOG00000010842	pabpc1l	63	76.235	ENSPTRG00000013531	PABPC1L	98	76.235	Pan_troglodytes
ENSAPOG00000010842	pabpc1l	99	66.986	ENSPANG00000018788	PABPC1L	99	66.879	Papio_anubis
ENSAPOG00000010842	pabpc1l	99	75.484	ENSPKIG00000007322	pabpc1l	99	75.484	Paramormyrops_kingsleyae
ENSAPOG00000010842	pabpc1l	53	82.443	ENSPKIG00000016810	-	93	82.443	Paramormyrops_kingsleyae
ENSAPOG00000010842	pabpc1l	68	77.938	ENSPSIG00000013289	PABPC1L	99	77.938	Pelodiscus_sinensis
ENSAPOG00000010842	pabpc1l	61	91.628	ENSPMGG00000023117	pabpc1l	97	91.628	Periophthalmus_magnuspinnatus
ENSAPOG00000010842	pabpc1l	59	78.155	ENSPMGG00000023121	-	96	78.155	Periophthalmus_magnuspinnatus
ENSAPOG00000010842	pabpc1l	98	59.455	ENSPEMG00000020671	Pabpc1l	98	59.554	Peromyscus_maniculatus_bairdii
ENSAPOG00000010842	pabpc1l	99	82.504	ENSPFOG00000013241	pabpc1l	99	82.504	Poecilia_formosa
ENSAPOG00000010842	pabpc1l	53	95.385	ENSPLAG00000023686	-	92	95.385	Poecilia_latipinna
ENSAPOG00000010842	pabpc1l	99	82.343	ENSPLAG00000017490	-	99	82.343	Poecilia_latipinna
ENSAPOG00000010842	pabpc1l	99	82.770	ENSPMEG00000007677	pabpc1l	99	82.770	Poecilia_mexicana
ENSAPOG00000010842	pabpc1l	53	95.385	ENSPMEG00000009185	-	88	95.385	Poecilia_mexicana
ENSAPOG00000010842	pabpc1l	67	89.781	ENSPREG00000015886	pabpc1l	99	89.781	Poecilia_reticulata
ENSAPOG00000010842	pabpc1l	99	66.507	ENSPPYG00000011042	PABPC1L	99	66.561	Pongo_abelii
ENSAPOG00000010842	pabpc1l	61	84.375	ENSPCAG00000011787	-	75	84.375	Procavia_capensis
ENSAPOG00000010842	pabpc1l	99	66.188	ENSPCOG00000020630	PABPC1L	99	66.242	Propithecus_coquereli
ENSAPOG00000010842	pabpc1l	99	65.287	ENSPVAG00000012663	PABPC1L	99	65.127	Pteropus_vampyrus
ENSAPOG00000010842	pabpc1l	99	80.583	ENSPNYG00000004101	pabpc1l	99	84.807	Pundamilia_nyererei
ENSAPOG00000010842	pabpc1l	99	68.971	ENSPNAG00000021248	pabpc1l	99	69.243	Pygocentrus_nattereri
ENSAPOG00000010842	pabpc1l	99	59.777	ENSRNOG00000012750	Pabpc1l	99	60.000	Rattus_norvegicus
ENSAPOG00000010842	pabpc1l	99	66.667	ENSRBIG00000035381	PABPC1L	99	66.879	Rhinopithecus_bieti
ENSAPOG00000010842	pabpc1l	99	66.507	ENSRROG00000044498	PABPC1L	99	66.720	Rhinopithecus_roxellana
ENSAPOG00000010842	pabpc1l	98	66.827	ENSSBOG00000009532	-	98	66.667	Saimiri_boliviensis_boliviensis
ENSAPOG00000010842	pabpc1l	98	62.500	ENSSHAG00000011446	PABPC1L	99	62.295	Sarcophilus_harrisii
ENSAPOG00000010842	pabpc1l	99	76.006	ENSSFOG00015017304	pabpc1l	99	76.006	Scleropages_formosus
ENSAPOG00000010842	pabpc1l	99	82.391	ENSSMAG00000010516	pabpc1l	98	95.349	Scophthalmus_maximus
ENSAPOG00000010842	pabpc1l	99	82.931	ENSSDUG00000014743	pabpc1l	99	82.931	Seriola_dumerili
ENSAPOG00000010842	pabpc1l	96	80.699	ENSSLDG00000006981	pabpc1l	98	88.584	Seriola_lalandi_dorsalis
ENSAPOG00000010842	pabpc1l	99	69.365	ENSSPUG00000004233	PABPC1L	99	69.365	Sphenodon_punctatus
ENSAPOG00000010842	pabpc1l	99	83.031	ENSSPAG00000017137	pabpc1l	99	82.730	Stegastes_partitus
ENSAPOG00000010842	pabpc1l	99	67.585	ENSSSCG00000007382	PABPC1L	99	67.747	Sus_scrofa
ENSAPOG00000010842	pabpc1l	98	70.270	ENSTGUG00000005114	PABPC1L	99	69.668	Taeniopygia_guttata
ENSAPOG00000010842	pabpc1l	97	81.260	ENSTRUG00000011085	pabpc1l	97	81.260	Takifugu_rubripes
ENSAPOG00000010842	pabpc1l	99	79.417	ENSTNIG00000017903	pabpc1l	98	79.417	Tetraodon_nigroviridis
ENSAPOG00000010842	pabpc1l	93	76.712	ENSTBEG00000002851	PABPC1L	79	76.712	Tupaia_belangeri
ENSAPOG00000010842	pabpc1l	94	64.966	ENSTTRG00000007618	PABPC1L	100	65.615	Tursiops_truncatus
ENSAPOG00000010842	pabpc1l	99	65.964	ENSUAMG00000017682	PABPC1L	99	65.802	Ursus_americanus
ENSAPOG00000010842	pabpc1l	67	72.981	ENSUMAG00000025436	PABPC1L	92	72.981	Ursus_maritimus
ENSAPOG00000010842	pabpc1l	99	66.667	ENSVVUG00000018939	PABPC1L	99	66.557	Vulpes_vulpes
ENSAPOG00000010842	pabpc1l	99	68.631	ENSXETG00000022831	pabpc1l	99	68.631	Xenopus_tropicalis
ENSAPOG00000010842	pabpc1l	99	81.583	ENSXCOG00000005459	pabpc1l	99	90.780	Xiphophorus_couchianus
ENSAPOG00000010842	pabpc1l	99	82.183	ENSXMAG00000017135	pabpc1l	99	82.183	Xiphophorus_maculatus