EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000011062 (Gene tree)
Gene ID: 110959827
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 12053 bases
Position: chrMVNR01000735.1:12587-24639
Accession: 110959827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000008825	RRM_1	PF00076.22	3.2e-39	1	3
ENSAPOP00000008825	RRM_1	PF00076.22	3.2e-39	2	3
ENSAPOP00000008825	RRM_1	PF00076.22	3.2e-39	3	3
ENSAPOP00000008823	RRM_1	PF00076.22	4.5e-39	1	3
ENSAPOP00000008823	RRM_1	PF00076.22	4.5e-39	2	3
ENSAPOP00000008823	RRM_1	PF00076.22	4.5e-39	3	3
ENSAPOP00000026890	RRM_1	PF00076.22	5.1e-39	1	3
ENSAPOP00000026890	RRM_1	PF00076.22	5.1e-39	2	3
ENSAPOP00000026890	RRM_1	PF00076.22	5.1e-39	3	3
ENSAPOP00000026897	RRM_1	PF00076.22	5.6e-39	1	3
ENSAPOP00000026897	RRM_1	PF00076.22	5.6e-39	2	3
ENSAPOP00000026897	RRM_1	PF00076.22	5.6e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000002567	-	4952	XM_022206816	ENSAPOP00000026897	618 (aa)	XP_022062508	UPI000B8F5E73
ENSAPOT00000002598	-	1776	-	ENSAPOP00000008823	591 (aa)	-	-
ENSAPOT00000002581	-	4718	-	ENSAPOP00000008825	540 (aa)	-	-
ENSAPOT00000002579	-	4928	XM_022206818	ENSAPOP00000026890	610 (aa)	XP_022062510	UPI000B8F5DF1

Gene Model

Click here to download ENSAPOG00000011062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000011062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000011062	rbm47	53	66.667	ENSAPOG00000009209	rbm46	57	68.750
ENSAPOG00000011062	rbm47	55	52.980	ENSAPOG00000000478	syncrip	67	44.737
ENSAPOG00000011062	rbm47	56	54.248	ENSAPOG00000006236	hnrnpr	68	45.561
ENSAPOG00000011062	rbm47	55	53.974	ENSAPOG00000013389	syncripl	73	45.985
ENSAPOG00000011062	rbm47	79	52.741	ENSAPOG00000008259	a1cf	90	53.592

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000011062	rbm47	100	81.383	ENSG00000163694	RBM47	100	84.793	Homo_sapiens
ENSAPOG00000011062	rbm47	93	84.225	ENSAMEG00000009672	RBM47	100	76.080	Ailuropoda_melanoleuca
ENSAPOG00000011062	rbm47	100	94.435	ENSACIG00000011531	rbm47	100	94.266	Amphilophus_citrinellus
ENSAPOG00000011062	rbm47	100	99.743	ENSAOCG00000022245	rbm47	100	99.748	Amphiprion_ocellaris
ENSAPOG00000011062	rbm47	100	99.743	ENSAPEG00000018304	rbm47	100	99.748	Amphiprion_percula
ENSAPOG00000011062	rbm47	100	96.915	ENSATEG00000018400	rbm47	100	96.915	Anabas_testudineus
ENSAPOG00000011062	rbm47	100	81.980	ENSAPLG00000013974	RBM47	100	77.167	Anas_platyrhynchos
ENSAPOG00000011062	rbm47	100	78.517	ENSACAG00000011833	RBM47	100	76.080	Anolis_carolinensis
ENSAPOG00000011062	rbm47	100	82.933	ENSANAG00000029440	RBM47	100	84.000	Aotus_nancymaae
ENSAPOG00000011062	rbm47	100	94.344	ENSACLG00000016902	rbm47	100	94.344	Astatotilapia_calliptera
ENSAPOG00000011062	rbm47	100	83.668	ENSAMXG00000021794	rbm47	100	85.678	Astyanax_mexicanus
ENSAPOG00000011062	rbm47	100	79.847	ENSBTAG00000002356	RBM47	100	77.759	Bos_taurus
ENSAPOG00000011062	rbm47	98	83.978	ENSCJAG00000019385	RBM47	100	84.267	Callithrix_jacchus
ENSAPOG00000011062	rbm47	93	84.986	ENSCAFG00000015898	RBM47	100	77.592	Canis_familiaris
ENSAPOG00000011062	rbm47	83	80.894	ENSCAFG00020010558	RBM47	94	82.493	Canis_lupus_dingo
ENSAPOG00000011062	rbm47	100	79.847	ENSCHIG00000026214	RBM47	100	77.759	Capra_hircus
ENSAPOG00000011062	rbm47	84	86.547	ENSTSYG00000033612	RBM47	93	85.398	Carlito_syrichta
ENSAPOG00000011062	rbm47	100	72.697	ENSCAPG00000008426	RBM47	100	72.529	Cavia_aperea
ENSAPOG00000011062	rbm47	100	82.667	ENSCPOG00000014100	RBM47	100	77.926	Cavia_porcellus
ENSAPOG00000011062	rbm47	100	83.733	ENSCCAG00000030129	-	100	83.733	Cebus_capucinus
ENSAPOG00000011062	rbm47	99	55.444	ENSCCAG00000024397	-	99	55.109	Cebus_capucinus
ENSAPOG00000011062	rbm47	100	81.383	ENSCATG00000042064	RBM47	100	84.309	Cercocebus_atys
ENSAPOG00000011062	rbm47	100	81.698	ENSCLAG00000001684	RBM47	100	82.911	Chinchilla_lanigera
ENSAPOG00000011062	rbm47	93	84.746	ENSCSAG00000017060	RBM47	100	77.667	Chlorocebus_sabaeus
ENSAPOG00000011062	rbm47	88	74.324	ENSCHOG00000011731	RBM47	88	76.682	Choloepus_hoffmanni
ENSAPOG00000011062	rbm47	100	82.908	ENSCPBG00000013831	RBM47	100	79.104	Chrysemys_picta_bellii
ENSAPOG00000011062	rbm47	100	82.540	ENSCANG00000019997	RBM47	100	84.309	Colobus_angolensis_palliatus
ENSAPOG00000011062	rbm47	100	82.447	ENSCGRG00001000623	-	100	83.511	Cricetulus_griseus_chok1gshd
ENSAPOG00000011062	rbm47	100	77.188	ENSCGRG00001020102	-	100	78.780	Cricetulus_griseus_chok1gshd
ENSAPOG00000011062	rbm47	100	78.446	ENSCGRG00000007762	-	100	80.380	Cricetulus_griseus_crigri
ENSAPOG00000011062	rbm47	100	76.923	ENSCGRG00000014760	-	100	78.515	Cricetulus_griseus_crigri
ENSAPOG00000011062	rbm47	100	89.748	ENSCSEG00000004545	rbm47	100	89.580	Cynoglossus_semilaevis
ENSAPOG00000011062	rbm47	100	95.373	ENSCVAG00000020144	rbm47	100	95.373	Cyprinodon_variegatus
ENSAPOG00000011062	rbm47	100	86.445	ENSDARG00000061985	rbm47	100	86.957	Danio_rerio
ENSAPOG00000011062	rbm47	93	85.674	ENSDNOG00000046854	RBM47	100	77.554	Dasypus_novemcinctus
ENSAPOG00000011062	rbm47	100	79.798	ENSDORG00000010144	Rbm47	100	77.243	Dipodomys_ordii
ENSAPOG00000011062	rbm47	93	82.682	ENSETEG00000009194	RBM47	100	77.537	Echinops_telfairi
ENSAPOG00000011062	rbm47	99	58.113	ENSEBUG00000011912	rbm47	86	74.640	Eptatretus_burgeri
ENSAPOG00000011062	rbm47	93	85.393	ENSEASG00005008443	RBM47	100	77.759	Equus_asinus_asinus
ENSAPOG00000011062	rbm47	93	85.393	ENSECAG00000004400	RBM47	100	77.759	Equus_caballus
ENSAPOG00000011062	rbm47	75	82.684	ENSEEUG00000001194	RBM47	75	84.848	Erinaceus_europaeus
ENSAPOG00000011062	rbm47	100	90.127	ENSELUG00000006148	rbm47	100	90.127	Esox_lucius
ENSAPOG00000011062	rbm47	93	84.225	ENSFCAG00000012399	RBM47	100	78.057	Felis_catus
ENSAPOG00000011062	rbm47	100	82.143	ENSFALG00000002861	RBM47	100	78.130	Ficedula_albicollis
ENSAPOG00000011062	rbm47	100	81.432	ENSFDAG00000016326	RBM47	100	76.167	Fukomys_damarensis
ENSAPOG00000011062	rbm47	100	93.316	ENSFHEG00000007938	rbm47	100	89.545	Fundulus_heteroclitus
ENSAPOG00000011062	rbm47	100	88.579	ENSGMOG00000014802	rbm47	100	88.131	Gadus_morhua
ENSAPOG00000011062	rbm47	72	82.398	ENSGALG00000014267	RBM47	99	85.450	Gallus_gallus
ENSAPOG00000011062	rbm47	72	89.460	ENSGAFG00000020571	rbm47	98	93.531	Gambusia_affinis
ENSAPOG00000011062	rbm47	100	94.344	ENSGACG00000016223	rbm47	100	94.344	Gasterosteus_aculeatus
ENSAPOG00000011062	rbm47	100	82.908	ENSGAGG00000020051	RBM47	100	79.104	Gopherus_agassizii
ENSAPOG00000011062	rbm47	100	81.383	ENSGGOG00000001367	RBM47	100	84.309	Gorilla_gorilla
ENSAPOG00000011062	rbm47	100	94.344	ENSHBUG00000003520	rbm47	100	94.344	Haplochromis_burtoni
ENSAPOG00000011062	rbm47	100	61.624	ENSHGLG00000016914	RBM47	100	80.000	Heterocephalus_glaber_female
ENSAPOG00000011062	rbm47	100	82.493	ENSHGLG00100014028	-	100	80.000	Heterocephalus_glaber_male
ENSAPOG00000011062	rbm47	100	76.471	ENSHGLG00100003071	-	100	69.398	Heterocephalus_glaber_male
ENSAPOG00000011062	rbm47	99	95.887	ENSHCOG00000002074	rbm47	99	95.887	Hippocampus_comes
ENSAPOG00000011062	rbm47	100	87.436	ENSIPUG00000004743	rbm47	100	83.697	Ictalurus_punctatus
ENSAPOG00000011062	rbm47	100	81.167	ENSSTOG00000004727	RBM47	100	83.820	Ictidomys_tridecemlineatus
ENSAPOG00000011062	rbm47	93	85.634	ENSJJAG00000013823	Rbm47	100	76.333	Jaculus_jaculus
ENSAPOG00000011062	rbm47	100	95.385	ENSKMAG00000000084	rbm47	100	95.385	Kryptolebias_marmoratus
ENSAPOG00000011062	rbm47	100	95.373	ENSLBEG00000008436	rbm47	100	95.373	Labrus_bergylta
ENSAPOG00000011062	rbm47	93	87.955	ENSLACG00000007196	RBM47	100	78.464	Latimeria_chalumnae
ENSAPOG00000011062	rbm47	100	82.441	ENSLOCG00000012966	rbm47	95	82.441	Lepisosteus_oculatus
ENSAPOG00000011062	rbm47	100	78.772	ENSLAFG00000011998	RBM47	100	77.796	Loxodonta_africana
ENSAPOG00000011062	rbm47	100	81.383	ENSMFAG00000037967	RBM47	100	84.309	Macaca_fascicularis
ENSAPOG00000011062	rbm47	93	84.746	ENSMMUG00000012036	RBM47	100	82.902	Macaca_mulatta
ENSAPOG00000011062	rbm47	100	81.117	ENSMNEG00000040774	RBM47	100	84.309	Macaca_nemestrina
ENSAPOG00000011062	rbm47	100	83.175	ENSMLEG00000041432	RBM47	100	85.079	Mandrillus_leucophaeus
ENSAPOG00000011062	rbm47	100	96.658	ENSMAMG00000019143	rbm47	100	96.658	Mastacembelus_armatus
ENSAPOG00000011062	rbm47	100	94.344	ENSMZEG00005023659	rbm47	100	94.344	Maylandia_zebra
ENSAPOG00000011062	rbm47	100	82.398	ENSMGAG00000012226	RBM47	100	78.773	Meleagris_gallopavo
ENSAPOG00000011062	rbm47	100	81.794	ENSMAUG00000006493	Rbm47	100	82.850	Mesocricetus_auratus
ENSAPOG00000011062	rbm47	100	79.357	ENSMICG00000026417	RBM47	100	81.818	Microcebus_murinus
ENSAPOG00000011062	rbm47	100	81.746	ENSMOCG00000021170	Rbm47	100	82.540	Microtus_ochrogaster
ENSAPOG00000011062	rbm47	100	95.116	ENSMMOG00000007260	rbm47	100	95.116	Mola_mola
ENSAPOG00000011062	rbm47	100	81.841	ENSMODG00000007003	RBM47	100	78.631	Monodelphis_domestica
ENSAPOG00000011062	rbm47	56	78.135	ENSMODG00000015426	-	97	78.135	Monodelphis_domestica
ENSAPOG00000011062	rbm47	100	75.426	ENSMODG00000020561	-	100	73.289	Monodelphis_domestica
ENSAPOG00000011062	rbm47	100	95.630	ENSMALG00000005167	rbm47	100	95.630	Monopterus_albus
ENSAPOG00000011062	rbm47	100	82.713	MGP_CAROLIEiJ_G0027258	Rbm47	100	83.777	Mus_caroli
ENSAPOG00000011062	rbm47	100	82.713	ENSMUSG00000070780	Rbm47	100	83.777	Mus_musculus
ENSAPOG00000011062	rbm47	100	82.447	MGP_PahariEiJ_G0017040	Rbm47	100	83.511	Mus_pahari
ENSAPOG00000011062	rbm47	100	82.713	MGP_SPRETEiJ_G0028253	Rbm47	100	83.777	Mus_spretus
ENSAPOG00000011062	rbm47	93	85.070	ENSMPUG00000006177	RBM47	94	77.387	Mustela_putorius_furo
ENSAPOG00000011062	rbm47	100	80.916	ENSMLUG00000000889	RBM47	100	78.000	Myotis_lucifugus
ENSAPOG00000011062	rbm47	100	80.102	ENSNGAG00000003325	Rbm47	100	76.461	Nannospalax_galili
ENSAPOG00000011062	rbm47	100	92.671	ENSNBRG00000015092	rbm47	100	92.508	Neolamprologus_brichardi
ENSAPOG00000011062	rbm47	100	81.383	ENSNLEG00000017151	RBM47	100	84.309	Nomascus_leucogenys
ENSAPOG00000011062	rbm47	65	87.288	ENSMEUG00000009516	-	99	80.425	Notamacropus_eugenii
ENSAPOG00000011062	rbm47	86	85.892	ENSOPRG00000016507	-	75	85.892	Ochotona_princeps
ENSAPOG00000011062	rbm47	93	84.225	ENSODEG00000004873	RBM47	100	77.759	Octodon_degus
ENSAPOG00000011062	rbm47	100	95.887	ENSONIG00000009061	rbm47	100	92.810	Oreochromis_niloticus
ENSAPOG00000011062	rbm47	100	81.074	ENSOANG00000008978	RBM47	100	77.537	Ornithorhynchus_anatinus
ENSAPOG00000011062	rbm47	100	79.795	ENSOCUG00000012034	RBM47	100	77.333	Oryctolagus_cuniculus
ENSAPOG00000011062	rbm47	100	94.872	ENSORLG00000005847	rbm47	100	94.872	Oryzias_latipes
ENSAPOG00000011062	rbm47	100	94.872	ENSORLG00020005154	rbm47	100	94.872	Oryzias_latipes_hni
ENSAPOG00000011062	rbm47	100	94.615	ENSORLG00015000066	rbm47	100	94.615	Oryzias_latipes_hsok
ENSAPOG00000011062	rbm47	100	94.344	ENSOMEG00000010730	rbm47	100	94.344	Oryzias_melastigma
ENSAPOG00000011062	rbm47	93	78.873	ENSOGAG00000025193	-	100	71.141	Otolemur_garnettii
ENSAPOG00000011062	rbm47	93	84.789	ENSOGAG00000029367	-	100	77.554	Otolemur_garnettii
ENSAPOG00000011062	rbm47	100	69.514	ENSOARG00000012711	RBM47	100	70.184	Ovis_aries
ENSAPOG00000011062	rbm47	93	84.746	ENSPPAG00000029763	RBM47	95	84.309	Pan_paniscus
ENSAPOG00000011062	rbm47	100	81.266	ENSPPRG00000012873	RBM47	100	83.467	Panthera_pardus
ENSAPOG00000011062	rbm47	86	76.331	ENSPTIG00000017046	RBM47	100	76.134	Panthera_tigris_altaica
ENSAPOG00000011062	rbm47	100	81.383	ENSPTRG00000016006	RBM47	100	84.309	Pan_troglodytes
ENSAPOG00000011062	rbm47	100	81.383	ENSPANG00000005980	RBM47	100	84.309	Papio_anubis
ENSAPOG00000011062	rbm47	97	88.451	ENSPKIG00000005037	rbm47	100	84.103	Paramormyrops_kingsleyae
ENSAPOG00000011062	rbm47	100	83.805	ENSPKIG00000013431	RBM47	98	83.805	Paramormyrops_kingsleyae
ENSAPOG00000011062	rbm47	88	82.653	ENSPSIG00000017516	RBM47	97	81.238	Pelodiscus_sinensis
ENSAPOG00000011062	rbm47	100	90.388	ENSPMGG00000018540	rbm47	100	89.882	Periophthalmus_magnuspinnatus
ENSAPOG00000011062	rbm47	100	81.481	ENSPEMG00000011088	Rbm47	100	82.540	Peromyscus_maniculatus_bairdii
ENSAPOG00000011062	rbm47	100	93.316	ENSPFOG00000007997	rbm47	100	93.316	Poecilia_formosa
ENSAPOG00000011062	rbm47	100	93.059	ENSPLAG00000002072	rbm47	100	92.973	Poecilia_latipinna
ENSAPOG00000011062	rbm47	100	93.059	ENSPMEG00000017492	rbm47	100	93.059	Poecilia_mexicana
ENSAPOG00000011062	rbm47	100	93.316	ENSPREG00000008456	rbm47	100	93.316	Poecilia_reticulata
ENSAPOG00000011062	rbm47	99	68.013	ENSPPYG00000014688	RBM47	100	68.571	Pongo_abelii
ENSAPOG00000011062	rbm47	89	78.141	ENSPCAG00000011879	RBM47	81	83.709	Procavia_capensis
ENSAPOG00000011062	rbm47	100	81.117	ENSPCOG00000023451	RBM47	100	83.245	Propithecus_coquereli
ENSAPOG00000011062	rbm47	93	83.473	ENSPVAG00000003812	RBM47	100	76.962	Pteropus_vampyrus
ENSAPOG00000011062	rbm47	100	94.344	ENSPNYG00000022868	rbm47	100	91.883	Pundamilia_nyererei
ENSAPOG00000011062	rbm47	100	86.701	ENSPNAG00000007940	rbm47	100	87.980	Pygocentrus_nattereri
ENSAPOG00000011062	rbm47	100	79.695	ENSRNOG00000002408	Rbm47	100	77.462	Rattus_norvegicus
ENSAPOG00000011062	rbm47	100	82.540	ENSRBIG00000039601	RBM47	100	84.309	Rhinopithecus_bieti
ENSAPOG00000011062	rbm47	100	82.540	ENSRROG00000044696	RBM47	100	84.309	Rhinopithecus_roxellana
ENSAPOG00000011062	rbm47	100	74.204	ENSSBOG00000028475	RBM47	100	80.825	Saimiri_boliviensis_boliviensis
ENSAPOG00000011062	rbm47	100	82.097	ENSSHAG00000017576	RBM47	100	82.097	Sarcophilus_harrisii
ENSAPOG00000011062	rbm47	99	78.608	ENSSFOG00015024101	RBM47	99	83.880	Scleropages_formosus
ENSAPOG00000011062	rbm47	100	84.143	ENSSFOG00015012445	rbm47	100	84.655	Scleropages_formosus
ENSAPOG00000011062	rbm47	100	95.373	ENSSMAG00000009744	rbm47	100	95.373	Scophthalmus_maximus
ENSAPOG00000011062	rbm47	100	95.674	ENSSDUG00000022684	rbm47	100	94.968	Seriola_dumerili
ENSAPOG00000011062	rbm47	100	95.953	ENSSLDG00000003109	rbm47	100	95.953	Seriola_lalandi_dorsalis
ENSAPOG00000011062	rbm47	84	79.733	ENSSARG00000001735	RBM47	75	81.960	Sorex_araneus
ENSAPOG00000011062	rbm47	100	83.947	ENSSPUG00000007515	RBM47	100	84.392	Sphenodon_punctatus
ENSAPOG00000011062	rbm47	100	98.715	ENSSPAG00000001257	rbm47	100	98.741	Stegastes_partitus
ENSAPOG00000011062	rbm47	100	81.746	ENSSSCG00000008796	RBM47	100	77.425	Sus_scrofa
ENSAPOG00000011062	rbm47	100	81.888	ENSTGUG00000008705	RBM47	100	77.629	Taeniopygia_guttata
ENSAPOG00000011062	rbm47	100	89.882	ENSTRUG00000014050	rbm47	100	88.870	Takifugu_rubripes
ENSAPOG00000011062	rbm47	100	93.316	ENSTNIG00000006127	rbm47	100	89.542	Tetraodon_nigroviridis
ENSAPOG00000011062	rbm47	81	83.051	ENSTBEG00000001607	RBM47	76	82.133	Tupaia_belangeri
ENSAPOG00000011062	rbm47	93	85.393	ENSTTRG00000002839	RBM47	100	77.889	Tursiops_truncatus
ENSAPOG00000011062	rbm47	100	77.387	ENSUAMG00000021346	RBM47	100	77.722	Ursus_americanus
ENSAPOG00000011062	rbm47	52	82.540	ENSVPAG00000000641	-	56	79.310	Vicugna_pacos
ENSAPOG00000011062	rbm47	93	85.269	ENSVVUG00000014774	RBM47	100	77.425	Vulpes_vulpes
ENSAPOG00000011062	rbm47	100	81.726	ENSXETG00000012802	rbm47	100	78.203	Xenopus_tropicalis
ENSAPOG00000011062	rbm47	100	93.784	ENSXCOG00000000780	rbm47	100	93.784	Xiphophorus_couchianus
ENSAPOG00000011062	rbm47	100	93.830	ENSXMAG00000009874	rbm47	100	93.830	Xiphophorus_maculatus