EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000011073 (Gene tree)
Gene ID: 110965156
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 35858 bases
Position: chrMVNR01001378.1:134636-170493
Accession: 110965156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000008865	Rif1_N	PF12231.8	1.5e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000002524	-	7539	XM_022214091	ENSAPOP00000008865	2438 (aa)	XP_022069783	UPI000B8FEB4B

Gene Model

Click here to download ENSAPOG00000011073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000011073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000011073	rif1	52	46.908	ENSG00000080345	RIF1	97	53.012	Homo_sapiens
ENSAPOG00000011073	rif1	86	74.407	ENSACIG00000017765	rif1	98	74.177	Amphilophus_citrinellus
ENSAPOG00000011073	rif1	99	88.848	ENSAOCG00000017231	rif1	99	89.216	Amphiprion_ocellaris
ENSAPOG00000011073	rif1	97	87.975	ENSAPEG00000013228	rif1	99	87.975	Amphiprion_percula
ENSAPOG00000011073	rif1	99	69.681	ENSATEG00000022887	rif1	99	66.261	Anabas_testudineus
ENSAPOG00000011073	rif1	63	51.391	ENSAPLG00000007092	RIF1	69	51.317	Anas_platyrhynchos
ENSAPOG00000011073	rif1	50	48.433	ENSANAG00000024840	RIF1	51	48.558	Aotus_nancymaae
ENSAPOG00000011073	rif1	59	57.483	ENSAMXG00000010910	rif1	61	57.609	Astyanax_mexicanus
ENSAPOG00000011073	rif1	50	48.415	ENSCAFG00020016401	RIF1	51	48.415	Canis_lupus_dingo
ENSAPOG00000011073	rif1	64	48.246	ENSCHIG00000020327	RIF1	64	48.246	Capra_hircus
ENSAPOG00000011073	rif1	64	46.462	ENSTSYG00000008861	RIF1	62	46.541	Carlito_syrichta
ENSAPOG00000011073	rif1	58	39.660	ENSCAPG00000008957	RIF1	69	39.660	Cavia_aperea
ENSAPOG00000011073	rif1	53	44.162	ENSCPOG00000037898	RIF1	55	44.535	Cavia_porcellus
ENSAPOG00000011073	rif1	50	46.318	ENSCCAG00000024760	RIF1	51	46.397	Cebus_capucinus
ENSAPOG00000011073	rif1	50	48.168	ENSCATG00000033353	RIF1	51	48.580	Cercocebus_atys
ENSAPOG00000011073	rif1	59	49.313	ENSCLAG00000001517	RIF1	62	49.570	Chinchilla_lanigera
ENSAPOG00000011073	rif1	50	48.324	ENSCSAG00000016089	RIF1	59	44.649	Chlorocebus_sabaeus
ENSAPOG00000011073	rif1	65	50.966	ENSCPBG00000025885	RIF1	70	50.887	Chrysemys_picta_bellii
ENSAPOG00000011073	rif1	53	45.731	ENSCANG00000028962	RIF1	61	44.581	Colobus_angolensis_palliatus
ENSAPOG00000011073	rif1	68	45.562	ENSCGRG00001024589	Rif1	68	46.256	Cricetulus_griseus_chok1gshd
ENSAPOG00000011073	rif1	67	46.863	ENSCGRG00000010713	Rif1	68	47.796	Cricetulus_griseus_crigri
ENSAPOG00000011073	rif1	94	62.965	ENSCSEG00000003945	rif1	99	62.620	Cynoglossus_semilaevis
ENSAPOG00000011073	rif1	79	71.591	ENSCVAG00000022479	rif1	85	71.591	Cyprinodon_variegatus
ENSAPOG00000011073	rif1	61	54.929	ENSDARG00000062650	rif1	59	57.754	Danio_rerio
ENSAPOG00000011073	rif1	64	48.499	ENSDNOG00000011194	RIF1	61	49.002	Dasypus_novemcinctus
ENSAPOG00000011073	rif1	59	57.522	ENSETEG00000012421	RIF1	60	57.522	Echinops_telfairi
ENSAPOG00000011073	rif1	55	66.776	ENSEASG00005023434	RIF1	57	66.776	Equus_asinus_asinus
ENSAPOG00000011073	rif1	60	59.517	ENSECAG00000012679	RIF1	62	59.517	Equus_caballus
ENSAPOG00000011073	rif1	71	65.574	ENSELUG00000006826	rif1	67	65.574	Esox_lucius
ENSAPOG00000011073	rif1	60	50.665	ENSFALG00000013874	RIF1	68	50.799	Ficedula_albicollis
ENSAPOG00000011073	rif1	96	65.428	ENSFHEG00000013721	rif1	99	54.242	Fundulus_heteroclitus
ENSAPOG00000011073	rif1	65	67.669	ENSGMOG00000003517	rif1	99	67.669	Gadus_morhua
ENSAPOG00000011073	rif1	59	51.125	ENSGALG00000012484	RIF1	66	51.215	Gallus_gallus
ENSAPOG00000011073	rif1	94	75.770	ENSGAFG00000017196	rif1	99	75.770	Gambusia_affinis
ENSAPOG00000011073	rif1	66	50.485	ENSGAGG00000012595	RIF1	77	47.606	Gopherus_agassizii
ENSAPOG00000011073	rif1	96	70.934	ENSHBUG00000007125	rif1	99	70.748	Haplochromis_burtoni
ENSAPOG00000011073	rif1	100	52.492	ENSHCOG00000015943	rif1	70	64.605	Hippocampus_comes
ENSAPOG00000011073	rif1	60	57.607	ENSIPUG00000021703	rif1	65	56.640	Ictalurus_punctatus
ENSAPOG00000011073	rif1	50	48.913	ENSSTOG00000020712	RIF1	52	48.106	Ictidomys_tridecemlineatus
ENSAPOG00000011073	rif1	51	45.756	ENSJJAG00000023000	Rif1	53	46.195	Jaculus_jaculus
ENSAPOG00000011073	rif1	97	66.175	ENSKMAG00000002852	rif1	99	66.113	Kryptolebias_marmoratus
ENSAPOG00000011073	rif1	99	59.575	ENSLBEG00000023196	rif1	99	59.531	Labrus_bergylta
ENSAPOG00000011073	rif1	70	50.070	ENSLACG00000005425	RIF1	71	50.824	Latimeria_chalumnae
ENSAPOG00000011073	rif1	76	54.737	ENSLOCG00000002657	rif1	77	58.333	Lepisosteus_oculatus
ENSAPOG00000011073	rif1	50	48.246	ENSMFAG00000032233	RIF1	51	48.574	Macaca_fascicularis
ENSAPOG00000011073	rif1	50	48.246	ENSMMUG00000008611	RIF1	51	48.574	Macaca_mulatta
ENSAPOG00000011073	rif1	50	48.306	ENSMNEG00000031616	RIF1	51	48.306	Macaca_nemestrina
ENSAPOG00000011073	rif1	50	48.168	ENSMLEG00000042945	RIF1	51	48.580	Mandrillus_leucophaeus
ENSAPOG00000011073	rif1	83	67.012	ENSMAMG00000001745	rif1	70	71.233	Mastacembelus_armatus
ENSAPOG00000011073	rif1	90	73.269	ENSMZEG00005020920	rif1	99	73.338	Maylandia_zebra
ENSAPOG00000011073	rif1	64	51.864	ENSMGAG00000012732	RIF1	69	52.030	Meleagris_gallopavo
ENSAPOG00000011073	rif1	50	48.081	ENSMICG00000046127	RIF1	51	48.894	Microcebus_murinus
ENSAPOG00000011073	rif1	63	64.067	ENSMMOG00000006519	rif1	65	63.693	Mola_mola
ENSAPOG00000011073	rif1	89	65.513	ENSMALG00000016759	rif1	100	65.962	Monopterus_albus
ENSAPOG00000011073	rif1	51	45.879	MGP_PahariEiJ_G0025006	Rif1	52	45.879	Mus_pahari
ENSAPOG00000011073	rif1	52	47.432	MGP_SPRETEiJ_G0024476	Rif1	54	47.698	Mus_spretus
ENSAPOG00000011073	rif1	64	48.885	ENSMPUG00000000371	RIF1	64	48.885	Mustela_putorius_furo
ENSAPOG00000011073	rif1	96	66.625	ENSNBRG00000014257	rif1	99	72.778	Neolamprologus_brichardi
ENSAPOG00000011073	rif1	96	71.242	ENSONIG00000013657	rif1	75	71.269	Oreochromis_niloticus
ENSAPOG00000011073	rif1	54	54.787	ENSOANG00000006078	-	55	54.787	Ornithorhynchus_anatinus
ENSAPOG00000011073	rif1	93	65.031	ENSORLG00020001302	rif1	99	65.732	Oryzias_latipes_hni
ENSAPOG00000011073	rif1	94	64.286	ENSORLG00015000009	rif1	99	64.425	Oryzias_latipes_hsok
ENSAPOG00000011073	rif1	99	64.854	ENSOMEG00000021513	rif1	99	66.808	Oryzias_melastigma
ENSAPOG00000011073	rif1	73	48.405	ENSOGAG00000006141	RIF1	72	45.161	Otolemur_garnettii
ENSAPOG00000011073	rif1	50	48.154	ENSPTIG00000020652	RIF1	51	48.154	Panthera_tigris_altaica
ENSAPOG00000011073	rif1	74	55.487	ENSPKIG00000004267	rif1	76	60.286	Paramormyrops_kingsleyae
ENSAPOG00000011073	rif1	76	62.200	ENSPMGG00000016141	rif1	91	63.352	Periophthalmus_magnuspinnatus
ENSAPOG00000011073	rif1	62	48.712	ENSPEMG00000000446	Rif1	72	45.620	Peromyscus_maniculatus_bairdii
ENSAPOG00000011073	rif1	65	50.115	ENSPCIG00000009185	RIF1	67	50.038	Phascolarctos_cinereus
ENSAPOG00000011073	rif1	99	54.596	ENSPFOG00000017804	rif1	99	63.133	Poecilia_formosa
ENSAPOG00000011073	rif1	93	52.979	ENSPFOG00000000554	-	99	61.892	Poecilia_formosa
ENSAPOG00000011073	rif1	99	64.808	ENSPLAG00000017945	rif1	100	64.622	Poecilia_latipinna
ENSAPOG00000011073	rif1	96	65.361	ENSPREG00000018052	rif1	94	72.381	Poecilia_reticulata
ENSAPOG00000011073	rif1	98	63.914	ENSPNYG00000012940	rif1	98	71.108	Pundamilia_nyererei
ENSAPOG00000011073	rif1	64	50.279	ENSSHAG00000018552	RIF1	66	50.279	Sarcophilus_harrisii
ENSAPOG00000011073	rif1	83	53.855	ENSSFOG00015021539	rif1	93	53.916	Scleropages_formosus
ENSAPOG00000011073	rif1	91	75.222	ENSSDUG00000015632	rif1	99	76.413	Seriola_dumerili
ENSAPOG00000011073	rif1	99	73.649	ENSSLDG00000019531	rif1	66	73.526	Seriola_lalandi_dorsalis
ENSAPOG00000011073	rif1	66	50.888	ENSSPUG00000003062	RIF1	66	51.048	Sphenodon_punctatus
ENSAPOG00000011073	rif1	63	79.612	ENSSPAG00000018359	rif1	97	79.612	Stegastes_partitus
ENSAPOG00000011073	rif1	51	48.954	ENSSSCG00000016395	RIF1	51	49.342	Sus_scrofa
ENSAPOG00000011073	rif1	90	67.508	ENSTRUG00000015808	rif1	99	67.573	Takifugu_rubripes
ENSAPOG00000011073	rif1	84	65.748	ENSTNIG00000011538	rif1	95	65.838	Tetraodon_nigroviridis
ENSAPOG00000011073	rif1	57	53.448	ENSTBEG00000016082	RIF1	64	53.448	Tupaia_belangeri
ENSAPOG00000011073	rif1	50	49.407	ENSTTRG00000011190	RIF1	51	49.407	Tursiops_truncatus
ENSAPOG00000011073	rif1	51	48.504	ENSVPAG00000002162	RIF1	50	48.504	Vicugna_pacos
ENSAPOG00000011073	rif1	50	48.965	ENSVVUG00000011293	RIF1	63	47.258	Vulpes_vulpes
ENSAPOG00000011073	rif1	76	46.882	ENSXETG00000004530	rif1	77	46.746	Xenopus_tropicalis
ENSAPOG00000011073	rif1	96	61.663	ENSXMAG00000000506	rif1	99	61.290	Xiphophorus_maculatus