EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000011324 (Gene tree)
Gene ID: 110955751
Gene Symbol: smn1
Alias: fa12d01|smn|wu:fa12d01
Full Name: survival motor neuron protein 1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 5120 bases
Position: chrMVNR01000423.1:608191-613310
Accession: 110955751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000009074	SMN	PF06003.12	4.4e-111	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000002155	-	2294	XM_022200868	ENSAPOP00000009074	283 (aa)	XP_022056560	UPI000B906D3A

Gene Model

Click here to download ENSAPOG00000011324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000011324's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000011324	smn1	94	52.518	ENSG00000172062	SMN1	92	51.685	Homo_sapiens
ENSAPOG00000011324	smn1	94	52.518	ENSG00000205571	SMN2	92	51.685	Homo_sapiens
ENSAPOG00000011324	smn1	94	52.899	ENSAMEG00000003316	-	89	51.264	Ailuropoda_melanoleuca
ENSAPOG00000011324	smn1	60	75.882	ENSACIG00000007598	smn1	94	75.882	Amphilophus_citrinellus
ENSAPOG00000011324	smn1	93	77.947	ENSACIG00000019772	-	99	77.947	Amphilophus_citrinellus
ENSAPOG00000011324	smn1	100	95.760	ENSAOCG00000024444	smn1	100	95.760	Amphiprion_ocellaris
ENSAPOG00000011324	smn1	100	96.113	ENSAPEG00000016504	smn1	100	96.113	Amphiprion_percula
ENSAPOG00000011324	smn1	95	85.556	ENSATEG00000002182	smn1	82	83.704	Anabas_testudineus
ENSAPOG00000011324	smn1	69	50.244	ENSAPLG00000010912	-	96	45.274	Anas_platyrhynchos
ENSAPOG00000011324	smn1	98	51.228	ENSACAG00000010017	-	96	51.049	Anolis_carolinensis
ENSAPOG00000011324	smn1	94	50.000	ENSANAG00000032133	-	92	49.275	Aotus_nancymaae
ENSAPOG00000011324	smn1	99	80.287	ENSACLG00000007308	smn1	94	79.928	Astatotilapia_calliptera
ENSAPOG00000011324	smn1	100	63.732	ENSAMXG00000013884	smn1	100	65.614	Astyanax_mexicanus
ENSAPOG00000011324	smn1	94	52.482	ENSBTAG00000005743	SMN2	93	50.542	Bos_taurus
ENSAPOG00000011324	smn1	94	54.122	ENSCJAG00000016290	-	92	49.275	Callithrix_jacchus
ENSAPOG00000011324	smn1	94	51.613	ENSCAFG00000007812	SMN	93	51.625	Canis_familiaris
ENSAPOG00000011324	smn1	94	51.613	ENSCAFG00020019229	-	86	51.625	Canis_lupus_dingo
ENSAPOG00000011324	smn1	94	52.727	ENSCHIG00000015559	-	91	51.087	Capra_hircus
ENSAPOG00000011324	smn1	94	53.623	ENSTSYG00000012058	-	93	52.727	Carlito_syrichta
ENSAPOG00000011324	smn1	73	47.867	ENSCAPG00000011021	-	88	38.938	Cavia_aperea
ENSAPOG00000011324	smn1	94	50.000	ENSCPOG00000012328	-	93	52.650	Cavia_porcellus
ENSAPOG00000011324	smn1	94	50.183	ENSCPOG00000036973	-	92	53.237	Cavia_porcellus
ENSAPOG00000011324	smn1	94	50.185	ENSCCAG00000018127	-	91	49.275	Cebus_capucinus
ENSAPOG00000011324	smn1	94	52.878	ENSCATG00000037002	-	92	52.416	Cercocebus_atys
ENSAPOG00000011324	smn1	94	51.636	ENSCLAG00000000284	-	92	52.536	Chinchilla_lanigera
ENSAPOG00000011324	smn1	94	52.878	ENSCSAG00000015688	-	91	52.174	Chlorocebus_sabaeus
ENSAPOG00000011324	smn1	61	80.000	ENSCHOG00000007346	-	77	86.957	Choloepus_hoffmanni
ENSAPOG00000011324	smn1	96	49.827	ENSCPBG00000010968	-	97	48.881	Chrysemys_picta_bellii
ENSAPOG00000011324	smn1	97	49.643	ENSCANG00000033324	-	94	48.611	Colobus_angolensis_palliatus
ENSAPOG00000011324	smn1	94	53.261	ENSCANG00000038242	-	93	52.809	Colobus_angolensis_palliatus
ENSAPOG00000011324	smn1	94	52.727	ENSCGRG00001017959	-	93	51.111	Cricetulus_griseus_chok1gshd
ENSAPOG00000011324	smn1	94	41.481	ENSCGRG00001016998	-	91	38.745	Cricetulus_griseus_chok1gshd
ENSAPOG00000011324	smn1	94	52.727	ENSCGRG00000007698	Smn1	93	51.111	Cricetulus_griseus_crigri
ENSAPOG00000011324	smn1	98	66.783	ENSCSEG00000015227	smn1	100	67.133	Cynoglossus_semilaevis
ENSAPOG00000011324	smn1	100	79.930	ENSCVAG00000007498	smn1	100	79.930	Cyprinodon_variegatus
ENSAPOG00000011324	smn1	100	64.808	ENSDARG00000018494	smn1	100	62.587	Danio_rerio
ENSAPOG00000011324	smn1	82	48.963	ENSDNOG00000007283	-	97	47.521	Dasypus_novemcinctus
ENSAPOG00000011324	smn1	82	41.991	ENSDNOG00000045949	-	70	50.610	Dasypus_novemcinctus
ENSAPOG00000011324	smn1	94	43.116	ENSDORG00000007082	Smn1	90	44.528	Dipodomys_ordii
ENSAPOG00000011324	smn1	64	45.055	ENSETEG00000001406	-	90	45.789	Echinops_telfairi
ENSAPOG00000011324	smn1	96	35.473	ENSEBUG00000011902	smn1	96	36.482	Eptatretus_burgeri
ENSAPOG00000011324	smn1	89	48.077	ENSEASG00005018000	-	89	49.035	Equus_asinus_asinus
ENSAPOG00000011324	smn1	94	53.091	ENSECAG00000015215	-	93	53.818	Equus_caballus
ENSAPOG00000011324	smn1	88	51.341	ENSEEUG00000015777	-	100	50.385	Erinaceus_europaeus
ENSAPOG00000011324	smn1	100	68.310	ENSELUG00000018067	smn1	100	67.958	Esox_lucius
ENSAPOG00000011324	smn1	94	50.916	ENSFCAG00000028292	SMN	93	51.264	Felis_catus
ENSAPOG00000011324	smn1	95	54.182	ENSFALG00000012320	-	95	48.540	Ficedula_albicollis
ENSAPOG00000011324	smn1	94	48.929	ENSFDAG00000017683	-	92	51.613	Fukomys_damarensis
ENSAPOG00000011324	smn1	97	81.159	ENSFHEG00000018508	smn1	100	81.159	Fundulus_heteroclitus
ENSAPOG00000011324	smn1	100	67.138	ENSGMOG00000017279	smn1	98	65.018	Gadus_morhua
ENSAPOG00000011324	smn1	95	50.000	ENSGALG00000002430	SMN	97	47.082	Gallus_gallus
ENSAPOG00000011324	smn1	100	82.686	ENSGAFG00000009501	smn1	100	82.686	Gambusia_affinis
ENSAPOG00000011324	smn1	100	81.979	ENSGACG00000010584	smn1	97	80.212	Gasterosteus_aculeatus
ENSAPOG00000011324	smn1	96	51.799	ENSGAGG00000011374	-	95	49.822	Gopherus_agassizii
ENSAPOG00000011324	smn1	98	36.199	ENSGAGG00000013639	-	92	36.893	Gopherus_agassizii
ENSAPOG00000011324	smn1	54	60.759	ENSGGOG00000026704	-	85	55.556	Gorilla_gorilla
ENSAPOG00000011324	smn1	91	49.810	ENSGGOG00000003872	-	93	47.909	Gorilla_gorilla
ENSAPOG00000011324	smn1	100	82.686	ENSHBUG00000013987	smn1	100	82.686	Haplochromis_burtoni
ENSAPOG00000011324	smn1	94	50.000	ENSHGLG00000001905	-	94	51.825	Heterocephalus_glaber_female
ENSAPOG00000011324	smn1	94	51.460	ENSHGLG00000001018	-	92	52.688	Heterocephalus_glaber_female
ENSAPOG00000011324	smn1	94	51.460	ENSHGLG00100011252	-	92	52.688	Heterocephalus_glaber_male
ENSAPOG00000011324	smn1	92	50.000	ENSHGLG00100018676	-	96	51.866	Heterocephalus_glaber_male
ENSAPOG00000011324	smn1	94	75.849	ENSHCOG00000017136	smn1	89	75.849	Hippocampus_comes
ENSAPOG00000011324	smn1	100	65.854	ENSIPUG00000012580	smn1	89	65.854	Ictalurus_punctatus
ENSAPOG00000011324	smn1	91	52.075	ENSSTOG00000012288	-	93	51.481	Ictidomys_tridecemlineatus
ENSAPOG00000011324	smn1	100	80.420	ENSKMAG00000007239	smn1	100	80.420	Kryptolebias_marmoratus
ENSAPOG00000011324	smn1	100	83.803	ENSLBEG00000022550	smn1	100	83.099	Labrus_bergylta
ENSAPOG00000011324	smn1	99	35.880	ENSLACG00000009808	-	95	35.495	Latimeria_chalumnae
ENSAPOG00000011324	smn1	100	52.083	ENSLOCG00000011339	smn1	100	57.986	Lepisosteus_oculatus
ENSAPOG00000011324	smn1	94	53.455	ENSLAFG00000003425	-	89	52.574	Loxodonta_africana
ENSAPOG00000011324	smn1	94	53.237	ENSMFAG00000031523	SMN1	95	51.119	Macaca_fascicularis
ENSAPOG00000011324	smn1	94	49.640	ENSMFAG00000008812	-	91	48.736	Macaca_fascicularis
ENSAPOG00000011324	smn1	94	53.237	ENSMMUG00000020214	SMN1	92	52.809	Macaca_mulatta
ENSAPOG00000011324	smn1	94	48.921	ENSMMUG00000030594	-	91	48.014	Macaca_mulatta
ENSAPOG00000011324	smn1	94	53.237	ENSMNEG00000035094	-	92	52.809	Macaca_nemestrina
ENSAPOG00000011324	smn1	76	41.228	ENSMNEG00000036423	-	80	40.376	Macaca_nemestrina
ENSAPOG00000011324	smn1	94	53.597	ENSMLEG00000041902	-	93	53.160	Mandrillus_leucophaeus
ENSAPOG00000011324	smn1	100	83.803	ENSMAMG00000011034	smn1	100	82.394	Mastacembelus_armatus
ENSAPOG00000011324	smn1	100	83.039	ENSMZEG00005013634	smn1	100	83.039	Maylandia_zebra
ENSAPOG00000011324	smn1	69	51.777	ENSMGAG00000008889	-	95	47.449	Meleagris_gallopavo
ENSAPOG00000011324	smn1	94	52.015	ENSMAUG00000010262	Smn1	93	50.741	Mesocricetus_auratus
ENSAPOG00000011324	smn1	83	44.578	ENSMICG00000034708	-	81	55.000	Microcebus_murinus
ENSAPOG00000011324	smn1	94	53.091	ENSMOCG00000017833	Smn1	93	51.852	Microtus_ochrogaster
ENSAPOG00000011324	smn1	96	69.963	ENSMMOG00000005504	smn1	97	70.290	Mola_mola
ENSAPOG00000011324	smn1	94	55.515	ENSMODG00000001436	-	92	47.143	Monodelphis_domestica
ENSAPOG00000011324	smn1	100	84.859	ENSMALG00000008025	smn1	100	83.099	Monopterus_albus
ENSAPOG00000011324	smn1	94	53.623	MGP_CAROLIEiJ_G0018836	Smn1	93	54.945	Mus_caroli
ENSAPOG00000011324	smn1	94	53.261	ENSMUSG00000021645	Smn1	93	54.579	Mus_musculus
ENSAPOG00000011324	smn1	94	54.275	MGP_PahariEiJ_G0015911	Smn1	93	54.945	Mus_pahari
ENSAPOG00000011324	smn1	94	53.261	MGP_SPRETEiJ_G0019718	Smn1	93	54.212	Mus_spretus
ENSAPOG00000011324	smn1	92	53.137	ENSMPUG00000014470	-	93	50.890	Mustela_putorius_furo
ENSAPOG00000011324	smn1	94	50.000	ENSMLUG00000010603	-	89	50.175	Myotis_lucifugus
ENSAPOG00000011324	smn1	94	52.364	ENSNGAG00000019833	Smn1	93	53.455	Nannospalax_galili
ENSAPOG00000011324	smn1	100	84.452	ENSNBRG00000023000	smn1	100	84.452	Neolamprologus_brichardi
ENSAPOG00000011324	smn1	94	52.878	ENSNLEG00000004454	-	92	52.060	Nomascus_leucogenys
ENSAPOG00000011324	smn1	67	51.282	ENSMEUG00000011393	-	100	45.690	Notamacropus_eugenii
ENSAPOG00000011324	smn1	88	48.263	ENSOPRG00000002015	-	100	50.193	Ochotona_princeps
ENSAPOG00000011324	smn1	91	52.830	ENSODEG00000015976	-	91	54.307	Octodon_degus
ENSAPOG00000011324	smn1	100	84.099	ENSONIG00000011799	smn1	100	84.099	Oreochromis_niloticus
ENSAPOG00000011324	smn1	94	48.399	ENSOANG00000001626	-	95	46.454	Ornithorhynchus_anatinus
ENSAPOG00000011324	smn1	94	53.261	ENSOCUG00000026649	-	92	49.825	Oryctolagus_cuniculus
ENSAPOG00000011324	smn1	94	53.506	ENSOCUG00000017097	-	92	50.719	Oryctolagus_cuniculus
ENSAPOG00000011324	smn1	94	42.599	ENSOCUG00000025183	-	92	43.972	Oryctolagus_cuniculus
ENSAPOG00000011324	smn1	100	79.152	ENSORLG00000010552	smn1	100	79.152	Oryzias_latipes
ENSAPOG00000011324	smn1	100	72.887	ENSORLG00020007936	smn1	100	71.479	Oryzias_latipes_hni
ENSAPOG00000011324	smn1	100	78.799	ENSORLG00015022425	smn1	100	78.799	Oryzias_latipes_hsok
ENSAPOG00000011324	smn1	100	80.919	ENSOMEG00000007824	smn1	100	80.919	Oryzias_melastigma
ENSAPOG00000011324	smn1	91	49.254	ENSOGAG00000031414	-	92	48.754	Otolemur_garnettii
ENSAPOG00000011324	smn1	94	52.000	ENSOARG00000005425	-	97	50.000	Ovis_aries
ENSAPOG00000011324	smn1	94	52.518	ENSPPAG00000036640	-	92	51.685	Pan_paniscus
ENSAPOG00000011324	smn1	94	50.916	ENSPPRG00000005575	-	93	51.264	Panthera_pardus
ENSAPOG00000011324	smn1	94	50.730	ENSPTIG00000007745	-	93	51.264	Panthera_tigris_altaica
ENSAPOG00000011324	smn1	94	51.957	ENSPTRG00000016955	-	92	51.685	Pan_troglodytes
ENSAPOG00000011324	smn1	94	50.000	ENSPANG00000000253	-	91	49.458	Papio_anubis
ENSAPOG00000011324	smn1	94	53.237	ENSPANG00000013601	-	91	52.536	Papio_anubis
ENSAPOG00000011324	smn1	100	59.649	ENSPKIG00000011096	smn1	100	58.947	Paramormyrops_kingsleyae
ENSAPOG00000011324	smn1	92	50.554	ENSPSIG00000014787	-	83	47.761	Pelodiscus_sinensis
ENSAPOG00000011324	smn1	100	70.979	ENSPMGG00000012285	smn1	97	69.065	Periophthalmus_magnuspinnatus
ENSAPOG00000011324	smn1	92	41.111	ENSPMAG00000005004	smn1	91	36.491	Petromyzon_marinus
ENSAPOG00000011324	smn1	94	56.777	ENSPCIG00000025764	-	93	46.786	Phascolarctos_cinereus
ENSAPOG00000011324	smn1	100	82.332	ENSPFOG00000007786	smn1	100	82.332	Poecilia_formosa
ENSAPOG00000011324	smn1	100	82.686	ENSPLAG00000012071	smn1	100	82.686	Poecilia_latipinna
ENSAPOG00000011324	smn1	100	82.332	ENSPMEG00000017085	smn1	100	82.332	Poecilia_mexicana
ENSAPOG00000011324	smn1	100	82.332	ENSPREG00000005824	smn1	100	82.332	Poecilia_reticulata
ENSAPOG00000011324	smn1	92	50.923	ENSPPYG00000015533	-	95	50.000	Pongo_abelii
ENSAPOG00000011324	smn1	50	46.897	ENSPPYG00000019189	-	84	41.566	Pongo_abelii
ENSAPOG00000011324	smn1	91	51.321	ENSPCAG00000004187	-	97	50.549	Procavia_capensis
ENSAPOG00000011324	smn1	63	50.549	ENSPCOG00000022307	-	78	51.429	Propithecus_coquereli
ENSAPOG00000011324	smn1	94	53.623	ENSPVAG00000005977	-	92	52.347	Pteropus_vampyrus
ENSAPOG00000011324	smn1	100	84.452	ENSPNYG00000014148	smn1	100	84.452	Pundamilia_nyererei
ENSAPOG00000011324	smn1	100	65.035	ENSPNAG00000014007	smn1	87	66.434	Pygocentrus_nattereri
ENSAPOG00000011324	smn1	94	53.091	ENSRNOG00000018067	Smn1	92	53.506	Rattus_norvegicus
ENSAPOG00000011324	smn1	94	52.878	ENSRBIG00000037052	-	91	52.174	Rhinopithecus_bieti
ENSAPOG00000011324	smn1	97	46.619	ENSRBIG00000036775	-	93	46.263	Rhinopithecus_bieti
ENSAPOG00000011324	smn1	94	48.881	ENSRROG00000031088	-	91	44.369	Rhinopithecus_roxellana
ENSAPOG00000011324	smn1	94	52.878	ENSRROG00000039399	-	94	50.530	Rhinopithecus_roxellana
ENSAPOG00000011324	smn1	55	55.280	ENSSBOG00000020112	-	87	45.669	Saimiri_boliviensis_boliviensis
ENSAPOG00000011324	smn1	94	54.545	ENSSBOG00000011665	-	91	49.638	Saimiri_boliviensis_boliviensis
ENSAPOG00000011324	smn1	94	55.515	ENSSHAG00000001499	-	98	44.643	Sarcophilus_harrisii
ENSAPOG00000011324	smn1	100	61.189	ENSSFOG00015015507	smn1	100	57.770	Scleropages_formosus
ENSAPOG00000011324	smn1	100	80.919	ENSSMAG00000007922	smn1	100	80.919	Scophthalmus_maximus
ENSAPOG00000011324	smn1	100	88.028	ENSSDUG00000018533	smn1	100	85.915	Seriola_dumerili
ENSAPOG00000011324	smn1	100	88.380	ENSSLDG00000021135	smn1	100	86.268	Seriola_lalandi_dorsalis
ENSAPOG00000011324	smn1	96	55.396	ENSSPUG00000000373	-	98	48.264	Sphenodon_punctatus
ENSAPOG00000011324	smn1	100	89.753	ENSSPAG00000004345	smn1	100	89.753	Stegastes_partitus
ENSAPOG00000011324	smn1	94	39.630	ENSSSCG00000029127	-	75	68.750	Sus_scrofa
ENSAPOG00000011324	smn1	94	51.986	ENSSSCG00000016970	-	92	53.597	Sus_scrofa
ENSAPOG00000011324	smn1	91	51.087	ENSTGUG00000001548	-	97	47.810	Taeniopygia_guttata
ENSAPOG00000011324	smn1	100	67.491	ENSTRUG00000000736	smn	100	67.845	Takifugu_rubripes
ENSAPOG00000011324	smn1	100	67.931	ENSTNIG00000009892	smn1	100	70.345	Tetraodon_nigroviridis
ENSAPOG00000011324	smn1	64	55.435	ENSTBEG00000002399	-	87	56.354	Tupaia_belangeri
ENSAPOG00000011324	smn1	94	54.945	ENSTTRG00000005080	-	91	53.309	Tursiops_truncatus
ENSAPOG00000011324	smn1	54	60.897	ENSUAMG00000024947	-	66	55.801	Ursus_americanus
ENSAPOG00000011324	smn1	94	53.623	ENSUMAG00000007842	-	69	51.220	Ursus_maritimus
ENSAPOG00000011324	smn1	91	49.042	ENSVPAG00000009887	-	62	82.609	Vicugna_pacos
ENSAPOG00000011324	smn1	94	51.613	ENSVVUG00000006934	-	93	51.625	Vulpes_vulpes
ENSAPOG00000011324	smn1	95	55.197	ENSXETG00000018189	smn2	95	49.310	Xenopus_tropicalis
ENSAPOG00000011324	smn1	87	33.462	ENSXETG00000004912	-	82	63.793	Xenopus_tropicalis
ENSAPOG00000011324	smn1	100	81.625	ENSXMAG00000001521	smn1	100	81.625	Xiphophorus_maculatus