EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000011658 (Gene tree)
Gene ID
110963330
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Plus strand
Length
27395 bases
Position
chrMVNR01001135.1:85258-112652
Accession
110963330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000027230tRNA_anti-codonPF01336.252.1e-1211
ENSAPOP00000009339tRNA_anti-codonPF01336.252.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000001723-1680-ENSAPOP00000027230559 (aa)--
ENSAPOT00000001711-2920XM_022211650ENSAPOP00000009339600 (aa)XP_022067342UPI000B8F8A38
Gene Model
Click here to download ENSAPOG00000011658's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000011658's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000011658rpa19964.344ENSAPOG00000019409RPA18069.231
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000011658rpa19962.586ENSAMEG00000007706RPA19663.682Ailuropoda_melanoleuca
ENSAPOG00000011658rpa19961.724ENSACIG00000012881RPA19962.521Amphilophus_citrinellus
ENSAPOG00000011658rpa110073.611ENSACIG00000007277rpa19977.083Amphilophus_citrinellus
ENSAPOG00000011658rpa19469.752ENSAOCG00000009003RPA19959.535Amphiprion_ocellaris
ENSAPOG00000011658rpa110094.667ENSAOCG00000023376rpa110094.667Amphiprion_ocellaris
ENSAPOG00000011658rpa19370.938ENSAPEG00000019132RPA18370.938Amphiprion_percula
ENSAPOG00000011658rpa110094.333ENSAPEG00000008634rpa110094.333Amphiprion_percula
ENSAPOG00000011658rpa19472.286ENSATEG00000006443RPA19960.587Anabas_testudineus
ENSAPOG00000011658rpa110086.702ENSATEG00000022024rpa19986.702Anabas_testudineus
ENSAPOG00000011658rpa19953.221ENSAPLG00000012442RPA19954.505Anas_platyrhynchos
ENSAPOG00000011658rpa19957.118ENSACAG00000014490RPA19857.711Anolis_carolinensis
ENSAPOG00000011658rpa19965.419ENSANAG00000023456RPA19864.372Aotus_nancymaae
ENSAPOG00000011658rpa19962.047ENSACLG00000005223RPA19961.732Astatotilapia_calliptera
ENSAPOG00000011658rpa19987.770ENSACLG00000006640rpa19987.770Astatotilapia_calliptera
ENSAPOG00000011658rpa110077.460ENSAMXG00000008418rpa19977.167Astyanax_mexicanus
ENSAPOG00000011658rpa19962.092ENSBTAG00000009711RPA19961.928Bos_taurus
ENSAPOG00000011658rpa17732.719WBGene00017546rpa-16532.719Caenorhabditis_elegans
ENSAPOG00000011658rpa19962.759ENSCJAG00000001848RPA19962.092Callithrix_jacchus
ENSAPOG00000011658rpa19962.520ENSCAFG00000019249RPA19963.175Canis_familiaris
ENSAPOG00000011658rpa19962.520ENSCAFG00020009847RPA19963.175Canis_lupus_dingo
ENSAPOG00000011658rpa19962.255ENSCHIG00000026308RPA19962.255Capra_hircus
ENSAPOG00000011658rpa19961.552ENSTSYG00000003482-9960.784Carlito_syrichta
ENSAPOG00000011658rpa19963.103ENSCPOG00000000035RPA19962.255Cavia_porcellus
ENSAPOG00000011658rpa19951.458ENSCCAG00000010981RPA19951.382Cebus_capucinus
ENSAPOG00000011658rpa19958.497ENSCLAG00000015045-9958.101Chinchilla_lanigera
ENSAPOG00000011658rpa19962.241ENSCLAG00000005185-9961.765Chinchilla_lanigera
ENSAPOG00000011658rpa19952.846ENSCSAG00000013833RPA19952.846Chlorocebus_sabaeus
ENSAPOG00000011658rpa17869.495ENSCHOG00000009454-9969.495Choloepus_hoffmanni
ENSAPOG00000011658rpa19960.449ENSCHOG00000013540-9961.499Choloepus_hoffmanni
ENSAPOG00000011658rpa19962.193ENSCPBG00000020377RPA19962.807Chrysemys_picta_bellii
ENSAPOG00000011658rpa19943.357ENSCING00000023482-9943.421Ciona_intestinalis
ENSAPOG00000011658rpa19966.011ENSCANG00000030911RPA19963.621Colobus_angolensis_palliatus
ENSAPOG00000011658rpa19962.887ENSCGRG00001008197Rpa19962.378Cricetulus_griseus_chok1gshd
ENSAPOG00000011658rpa18169.095ENSCGRG00000000582Rpa19964.032Cricetulus_griseus_crigri
ENSAPOG00000011658rpa19955.330ENSCSEG00000012726RPA19956.089Cynoglossus_semilaevis
ENSAPOG00000011658rpa110078.913ENSCSEG00000013066rpa110078.748Cynoglossus_semilaevis
ENSAPOG00000011658rpa18871.014ENSCVAG00000013446-9658.009Cyprinodon_variegatus
ENSAPOG00000011658rpa19983.306ENSCVAG00000019431rpa19983.471Cyprinodon_variegatus
ENSAPOG00000011658rpa19976.667ENSDARG00000003938rpa19976.667Danio_rerio
ENSAPOG00000011658rpa19962.336ENSDNOG00000017218RPA19962.171Dasypus_novemcinctus
ENSAPOG00000011658rpa19963.040ENSDORG00000006199Rpa19962.520Dipodomys_ordii
ENSAPOG00000011658rpa19941.749FBgn0010173RpA-709942.434Drosophila_melanogaster
ENSAPOG00000011658rpa18273.196ENSETEG00000017608RPA18273.196Echinops_telfairi
ENSAPOG00000011658rpa19964.516ENSEASG00005009372RPA19964.401Equus_asinus_asinus
ENSAPOG00000011658rpa19962.520ENSECAG00000023886RPA19962.459Equus_caballus
ENSAPOG00000011658rpa17570.167ENSEEUG00000002186-6870.167Erinaceus_europaeus
ENSAPOG00000011658rpa19362.689ENSELUG00000006136RPA19962.689Esox_lucius
ENSAPOG00000011658rpa19980.033ENSELUG00000021071rpa19980.033Esox_lucius
ENSAPOG00000011658rpa19962.316ENSFCAG00000006306RPA19961.928Felis_catus
ENSAPOG00000011658rpa19961.928ENSFALG00000006575RPA19961.084Ficedula_albicollis
ENSAPOG00000011658rpa19962.908ENSFDAG00000007720RPA19962.357Fukomys_damarensis
ENSAPOG00000011658rpa19983.278ENSFHEG00000003580rpa19983.278Fundulus_heteroclitus
ENSAPOG00000011658rpa19978.276ENSGMOG00000010382rpa19975.839Gadus_morhua
ENSAPOG00000011658rpa19960.659ENSGALG00000003072RPA19960.526Gallus_gallus
ENSAPOG00000011658rpa19983.833ENSGAFG00000012916rpa19983.833Gambusia_affinis
ENSAPOG00000011658rpa19471.167ENSGAFG00000020953RPA19959.389Gambusia_affinis
ENSAPOG00000011658rpa110083.416ENSGACG00000010856rpa110083.416Gasterosteus_aculeatus
ENSAPOG00000011658rpa19961.866ENSGAGG00000013611RPA19961.866Gopherus_agassizii
ENSAPOG00000011658rpa19965.412ENSGGOG00000014186RPA19963.000Gorilla_gorilla
ENSAPOG00000011658rpa19959.436ENSHBUG00000009348RPA19759.436Haplochromis_burtoni
ENSAPOG00000011658rpa110088.519ENSHBUG00000017773rpa19988.519Haplochromis_burtoni
ENSAPOG00000011658rpa19962.522ENSHGLG00000008846RPA19962.029Heterocephalus_glaber_female
ENSAPOG00000011658rpa19959.413ENSHGLG00100000799-9958.592Heterocephalus_glaber_male
ENSAPOG00000011658rpa19953.287ENSHGLG00100002005-9952.864Heterocephalus_glaber_male
ENSAPOG00000011658rpa19962.522ENSHGLG00100017755-9962.029Heterocephalus_glaber_male
ENSAPOG00000011658rpa19973.203ENSHCOG00000001401rpa19973.203Hippocampus_comes
ENSAPOG00000011658rpa19947.048ENSHCOG00000000351RPA19844.868Hippocampus_comes
ENSAPOG00000011658rpa19976.119ENSIPUG00000004400rpa19976.119Ictalurus_punctatus
ENSAPOG00000011658rpa19859.354ENSSTOG00000022475RPA19860.374Ictidomys_tridecemlineatus
ENSAPOG00000011658rpa19963.103ENSJJAG00000000876Rpa19863.497Jaculus_jaculus
ENSAPOG00000011658rpa19979.836ENSKMAG00000005605rpa19979.967Kryptolebias_marmoratus
ENSAPOG00000011658rpa19961.692ENSKMAG00000000234RPA19961.028Kryptolebias_marmoratus
ENSAPOG00000011658rpa110082.479ENSLBEG00000021604rpa110082.479Labrus_bergylta
ENSAPOG00000011658rpa19969.495ENSLBEG00000002281RPA18569.495Labrus_bergylta
ENSAPOG00000011658rpa17963.883ENSLACG00000007210RPA18963.883Latimeria_chalumnae
ENSAPOG00000011658rpa19972.277ENSLOCG00000006397rpa19972.231Lepisosteus_oculatus
ENSAPOG00000011658rpa19961.905ENSLAFG00000015354RPA19959.781Loxodonta_africana
ENSAPOG00000011658rpa18260.996ENSMFAG00000036138-9861.538Macaca_fascicularis
ENSAPOG00000011658rpa19958.783ENSMMUG00000002442-9957.661Macaca_mulatta
ENSAPOG00000011658rpa19963.276ENSMMUG00000011604-9962.768Macaca_mulatta
ENSAPOG00000011658rpa19957.219ENSMNEG00000029837-9765.066Macaca_nemestrina
ENSAPOG00000011658rpa19962.931ENSMNEG00000031632-9863.328Macaca_nemestrina
ENSAPOG00000011658rpa19959.520ENSMLEG00000038768-9860.336Mandrillus_leucophaeus
ENSAPOG00000011658rpa19471.395ENSMAMG00000020097RPA18270.872Mastacembelus_armatus
ENSAPOG00000011658rpa110087.500ENSMAMG00000017993rpa110087.500Mastacembelus_armatus
ENSAPOG00000011658rpa110088.186ENSMZEG00005007551rpa19988.186Maylandia_zebra
ENSAPOG00000011658rpa19962.047ENSMZEG00005024731RPA19961.732Maylandia_zebra
ENSAPOG00000011658rpa19960.139ENSMGAG00000005315RPA19959.770Meleagris_gallopavo
ENSAPOG00000011658rpa19963.085ENSMAUG00000010474Rpa19864.007Mesocricetus_auratus
ENSAPOG00000011658rpa19963.432ENSMICG00000012867RPA19962.726Microcebus_murinus
ENSAPOG00000011658rpa19962.295ENSMOCG00000013019Rpa19962.069Microtus_ochrogaster
ENSAPOG00000011658rpa19963.047ENSMMOG00000010868RPA19862.881Mola_mola
ENSAPOG00000011658rpa110083.000ENSMMOG00000014292rpa110085.172Mola_mola
ENSAPOG00000011658rpa19962.092ENSMODG00000010549RPA19961.601Monodelphis_domestica
ENSAPOG00000011658rpa110087.333ENSMALG00000011453rpa110087.333Monopterus_albus
ENSAPOG00000011658rpa19968.958ENSMALG00000001208RPA17968.958Monopterus_albus
ENSAPOG00000011658rpa19962.480MGP_CAROLIEiJ_G0016734Rpa19962.582Mus_caroli
ENSAPOG00000011658rpa19961.604ENSMUSG00000000751Rpa19961.650Mus_musculus
ENSAPOG00000011658rpa19962.500MGP_PahariEiJ_G0017871Rpa19962.602Mus_pahari
ENSAPOG00000011658rpa19961.499MGP_SPRETEiJ_G0017577Rpa19961.551Mus_spretus
ENSAPOG00000011658rpa19962.357ENSMPUG00000013119RPA19961.702Mustela_putorius_furo
ENSAPOG00000011658rpa19962.586ENSMLUG00000006113RPA19961.912Myotis_lucifugus
ENSAPOG00000011658rpa19962.414ENSNGAG00000004522Rpa19562.626Nannospalax_galili
ENSAPOG00000011658rpa110087.722ENSNBRG00000020595rpa19987.722Neolamprologus_brichardi
ENSAPOG00000011658rpa19961.199ENSNBRG00000009672RPA19759.567Neolamprologus_brichardi
ENSAPOG00000011658rpa19962.969ENSNLEG00000017149RPA19962.969Nomascus_leucogenys
ENSAPOG00000011658rpa19953.368ENSMEUG00000006714RPA19753.976Notamacropus_eugenii
ENSAPOG00000011658rpa19961.121ENSODEG00000009038RPA19661.745Octodon_degus
ENSAPOG00000011658rpa110086.786ENSONIG00000013135rpa19986.786Oreochromis_niloticus
ENSAPOG00000011658rpa19962.715ENSOANG00000010880RPA19962.748Ornithorhynchus_anatinus
ENSAPOG00000011658rpa19960.404ENSOCUG00000001504RPA19959.969Oryctolagus_cuniculus
ENSAPOG00000011658rpa19568.386ENSORLG00000003368RPA19956.308Oryzias_latipes
ENSAPOG00000011658rpa19986.288ENSORLG00000004856rpa19986.288Oryzias_latipes
ENSAPOG00000011658rpa19986.622ENSORLG00020008980rpa19986.622Oryzias_latipes_hni
ENSAPOG00000011658rpa19567.713ENSORLG00020015284RPA18567.713Oryzias_latipes_hni
ENSAPOG00000011658rpa17467.391ENSORLG00015005867-9567.391Oryzias_latipes_hsok
ENSAPOG00000011658rpa19986.622ENSORLG00015013982rpa19986.622Oryzias_latipes_hsok
ENSAPOG00000011658rpa19957.994ENSORLG00015020383RPA19957.524Oryzias_latipes_hsok
ENSAPOG00000011658rpa19960.391ENSOMEG00000011040RPA19960.391Oryzias_melastigma
ENSAPOG00000011658rpa19983.306ENSOMEG00000004704rpa19983.445Oryzias_melastigma
ENSAPOG00000011658rpa17574.725ENSOGAG00000029379-9874.725Otolemur_garnettii
ENSAPOG00000011658rpa19962.522ENSOGAG00000005581-9962.153Otolemur_garnettii
ENSAPOG00000011658rpa19962.255ENSOARG00000014479RPA19962.255Ovis_aries
ENSAPOG00000011658rpa19963.458ENSPPAG00000039680RPA19963.458Pan_paniscus
ENSAPOG00000011658rpa19962.153ENSPPRG00000011807RPA19961.765Panthera_pardus
ENSAPOG00000011658rpa19962.153ENSPTIG00000007898RPA19961.765Panthera_tigris_altaica
ENSAPOG00000011658rpa19963.458ENSPTRG00000008539RPA19963.458Pan_troglodytes
ENSAPOG00000011658rpa19963.448ENSPANG00000024592RPA19962.908Papio_anubis
ENSAPOG00000011658rpa19476.399ENSPKIG00000008053rpa19476.532Paramormyrops_kingsleyae
ENSAPOG00000011658rpa19962.241ENSPSIG00000015617RPA19863.345Pelodiscus_sinensis
ENSAPOG00000011658rpa19960.784ENSPMGG00000000543RPA19961.111Periophthalmus_magnuspinnatus
ENSAPOG00000011658rpa19983.662ENSPMGG00000011589rpa19783.662Periophthalmus_magnuspinnatus
ENSAPOG00000011658rpa19963.607ENSPEMG00000021061Rpa19963.218Peromyscus_maniculatus_bairdii
ENSAPOG00000011658rpa19961.827ENSPCIG00000019049RPA19961.726Phascolarctos_cinereus
ENSAPOG00000011658rpa19984.667ENSPFOG00000003987rpa19984.667Poecilia_formosa
ENSAPOG00000011658rpa19984.667ENSPLAG00000004984rpa19984.667Poecilia_latipinna
ENSAPOG00000011658rpa18771.111ENSPLAG00000008844-9659.061Poecilia_latipinna
ENSAPOG00000011658rpa18770.617ENSPMEG00000003627-9658.738Poecilia_mexicana
ENSAPOG00000011658rpa19984.833ENSPMEG00000020602rpa19984.833Poecilia_mexicana
ENSAPOG00000011658rpa19377.102ENSPREG00000010174rpa19576.964Poecilia_reticulata
ENSAPOG00000011658rpa19371.396ENSPREG00000010119RPA18271.396Poecilia_reticulata
ENSAPOG00000011658rpa19962.912ENSPCOG00000001799RPA19962.193Propithecus_coquereli
ENSAPOG00000011658rpa19961.664ENSPVAG00000002149RPA19961.664Pteropus_vampyrus
ENSAPOG00000011658rpa110088.519ENSPNYG00000016316rpa19988.519Pundamilia_nyererei
ENSAPOG00000011658rpa19961.890ENSPNYG00000024165RPA19961.575Pundamilia_nyererei
ENSAPOG00000011658rpa110068.078ENSPNAG00000008599rpa19669.808Pygocentrus_nattereri
ENSAPOG00000011658rpa19970.388ENSRNOG00000003123Rpa19963.054Rattus_norvegicus
ENSAPOG00000011658rpa19963.276ENSRBIG00000036587RPA19962.215Rhinopithecus_bieti
ENSAPOG00000011658rpa19957.980ENSRROG00000043278RPA19957.329Rhinopithecus_roxellana
ENSAPOG00000011658rpa19631.614YAR007CRFA19531.219Saccharomyces_cerevisiae
ENSAPOG00000011658rpa19663.393ENSSBOG00000030233RPA19764.286Saimiri_boliviensis_boliviensis
ENSAPOG00000011658rpa19961.856ENSSHAG00000007969RPA19861.375Sarcophilus_harrisii
ENSAPOG00000011658rpa110077.583ENSSFOG00015005362rpa19278.405Scleropages_formosus
ENSAPOG00000011658rpa19370.320ENSSMAG00000019746RPA18370.320Scophthalmus_maximus
ENSAPOG00000011658rpa110088.833ENSSDUG00000011949rpa110088.833Seriola_dumerili
ENSAPOG00000011658rpa19371.528ENSSDUG00000016358RPA18270.814Seriola_dumerili
ENSAPOG00000011658rpa19371.296ENSSLDG00000020784RPA18170.588Seriola_lalandi_dorsalis
ENSAPOG00000011658rpa110089.000ENSSLDG00000011806rpa110089.000Seriola_lalandi_dorsalis
ENSAPOG00000011658rpa18872.727ENSSARG00000007506RPA18772.727Sorex_araneus
ENSAPOG00000011658rpa19961.111ENSSPUG00000007223RPA19862.075Sphenodon_punctatus
ENSAPOG00000011658rpa19963.894ENSSPAG00000011165RPA19863.283Stegastes_partitus
ENSAPOG00000011658rpa110092.167ENSSPAG00000009903rpa110092.167Stegastes_partitus
ENSAPOG00000011658rpa19964.758ENSSSCG00000017822RPA19962.396Sus_scrofa
ENSAPOG00000011658rpa19961.084ENSTGUG00000005775RPA19960.626Taeniopygia_guttata
ENSAPOG00000011658rpa110081.667ENSTRUG00000003616rpa110081.667Takifugu_rubripes
ENSAPOG00000011658rpa19962.151ENSTRUG00000000405RPA18268.578Takifugu_rubripes
ENSAPOG00000011658rpa110083.007ENSTNIG00000016199rpa19983.170Tetraodon_nigroviridis
ENSAPOG00000011658rpa17870.455ENSTBEG00000002709RPA17470.455Tupaia_belangeri
ENSAPOG00000011658rpa19961.601ENSTTRG00000001169RPA19961.438Tursiops_truncatus
ENSAPOG00000011658rpa18869.231ENSUAMG00000015676RPA19569.231Ursus_americanus
ENSAPOG00000011658rpa19965.054ENSUMAG00000009328RPA19963.011Ursus_maritimus
ENSAPOG00000011658rpa19960.862ENSVPAG00000009443RPA19960.791Vicugna_pacos
ENSAPOG00000011658rpa19962.867ENSVVUG00000021715RPA19962.848Vulpes_vulpes
ENSAPOG00000011658rpa19965.391ENSXETG00000013538rpa19966.612Xenopus_tropicalis
ENSAPOG00000011658rpa19383.692ENSXCOG00000010068rpa19483.692Xiphophorus_couchianus
ENSAPOG00000011658rpa19962.657ENSXCOG00000009899-9962.657Xiphophorus_couchianus
ENSAPOG00000011658rpa19371.167ENSXMAG00000010333RPA18171.167Xiphophorus_maculatus
ENSAPOG00000011658rpa19983.167ENSXMAG00000004102rpa19984.229Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us