EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000011743 (Gene tree)
Gene ID
110947048
Gene Symbol
LSM5 (1 of many)
Alias
YER146W
Full Name
U6 snRNA-associated Sm-like protein LSm5
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Plus strand
Length
1894 bases
Position
chrMVNR01014775.1:1140-3033
Accession
110947048
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000009442LSMPF01423.228.4e-2011
ENSAPOP00000027287LSMPF01423.222.7e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000001544LSM5 (1 of many)-201544XM_022188513ENSAPOP0000000944289 (aa)XP_022044205-
ENSAPOT00000001556LSM5 (1 of many)-202189-ENSAPOP0000002728762 (aa)-UPI0003EBF674
Gene Model
Click here to download ENSAPOG00000011743's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000011743's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000011743LSM5100100.000ENSAPOG00000020779LSM5100100.000
ENSAPOG00000011743LSM58436.538ENSAPOG00000024096snrpe6633.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000011743LSM510096.774ENSG00000106355LSM510096.774Homo_sapiens
ENSAPOG00000011743LSM510096.774ENSAMEG00000006700LSM59095.122Ailuropoda_melanoleuca
ENSAPOG00000011743LSM57395.556ENSACIG00000019185lsm58095.556Amphilophus_citrinellus
ENSAPOG00000011743LSM5100100.000ENSAOCG00000001636lsm59098.780Amphiprion_ocellaris
ENSAPOG00000011743LSM5100100.000ENSAPEG00000008151lsm59098.780Amphiprion_percula
ENSAPOG00000011743LSM5100100.000ENSAPEG00000008201lsm5100100.000Amphiprion_percula
ENSAPOG00000011743LSM59495.238ENSATEG00000020470lsm57695.556Anabas_testudineus
ENSAPOG00000011743LSM59796.667ENSAPLG00000008171LSM59197.015Anas_platyrhynchos
ENSAPOG00000011743LSM56394.643ENSACAG00000009530LSM59394.643Anolis_carolinensis
ENSAPOG00000011743LSM510087.097ENSANAG00000037758-7787.097Aotus_nancymaae
ENSAPOG00000011743LSM510096.774ENSANAG00000034409-9093.902Aotus_nancymaae
ENSAPOG00000011743LSM510091.935ENSANAG00000024192-8490.123Aotus_nancymaae
ENSAPOG00000011743LSM5100100.000ENSACLG00000012891lsm58996.154Astatotilapia_calliptera
ENSAPOG00000011743LSM510080.000ENSAMXG00000035543lsm59080.000Astyanax_mexicanus
ENSAPOG00000011743LSM510096.774ENSBTAG00000002332LSM59095.122Bos_taurus
ENSAPOG00000011743LSM55477.083ENSBTAG00000052014-6377.083Bos_taurus
ENSAPOG00000011743LSM510077.419WBGene00003079lsm-59070.732Caenorhabditis_elegans
ENSAPOG00000011743LSM510083.871ENSCJAG00000005678-9182.716Callithrix_jacchus
ENSAPOG00000011743LSM510096.774ENSCJAG00000047379LSM58186.538Callithrix_jacchus
ENSAPOG00000011743LSM55688.000ENSCAFG00000030781-5888.000Canis_familiaris
ENSAPOG00000011743LSM510095.161ENSCAFG00000019261-8896.250Canis_familiaris
ENSAPOG00000011743LSM510096.774ENSCAFG00020004946LSM59095.122Canis_lupus_dingo
ENSAPOG00000011743LSM510093.548ENSCHIG00000004079-9092.683Capra_hircus
ENSAPOG00000011743LSM510096.774ENSCHIG00000024539LSM59095.122Capra_hircus
ENSAPOG00000011743LSM58374.324ENSCHIG00000021428-8975.641Capra_hircus
ENSAPOG00000011743LSM59289.474ENSTSYG00000028728-8981.707Carlito_syrichta
ENSAPOG00000011743LSM510064.516ENSTSYG00000036637-8869.512Carlito_syrichta
ENSAPOG00000011743LSM510087.097ENSTSYG00000026530-8275.610Carlito_syrichta
ENSAPOG00000011743LSM510096.774ENSTSYG00000006449-9095.122Carlito_syrichta
ENSAPOG00000011743LSM510088.710ENSCAPG00000006980LSM58798.462Cavia_aperea
ENSAPOG00000011743LSM510096.774ENSCPOG00000036386LSM59095.122Cavia_porcellus
ENSAPOG00000011743LSM510090.323ENSCCAG00000032792-7790.323Cebus_capucinus
ENSAPOG00000011743LSM59783.333ENSCCAG00000037334-7883.333Cebus_capucinus
ENSAPOG00000011743LSM510095.161ENSCCAG00000000821-9093.902Cebus_capucinus
ENSAPOG00000011743LSM510095.161ENSCCAG00000032123-9092.683Cebus_capucinus
ENSAPOG00000011743LSM510096.774ENSCCAG00000037808-9095.122Cebus_capucinus
ENSAPOG00000011743LSM510082.258ENSCATG00000014790-9592.727Cercocebus_atys
ENSAPOG00000011743LSM510096.774ENSCATG00000040218LSM510096.774Cercocebus_atys
ENSAPOG00000011743LSM510096.774ENSCLAG00000000202LSM59095.122Chinchilla_lanigera
ENSAPOG00000011743LSM59583.051ENSCLAG00000005062-8179.268Chinchilla_lanigera
ENSAPOG00000011743LSM58496.000ENSCHOG00000005335LSM59996.000Choloepus_hoffmanni
ENSAPOG00000011743LSM510096.774ENSCPBG00000013685LSM59095.122Chrysemys_picta_bellii
ENSAPOG00000011743LSM510087.097ENSCING00000020625-8983.544Ciona_intestinalis
ENSAPOG00000011743LSM510087.097ENSCSAVG00000001439-8885.714Ciona_savignyi
ENSAPOG00000011743LSM510096.774ENSCANG00000039909LSM510096.774Colobus_angolensis_palliatus
ENSAPOG00000011743LSM510096.774ENSCGRG00001015461Lsm59095.122Cricetulus_griseus_chok1gshd
ENSAPOG00000011743LSM510096.774ENSCGRG00000007677Lsm58896.970Cricetulus_griseus_crigri
ENSAPOG00000011743LSM57395.556ENSCSEG00000015286lsm57695.556Cynoglossus_semilaevis
ENSAPOG00000011743LSM5100100.000ENSCVAG00000004262lsm59096.341Cyprinodon_variegatus
ENSAPOG00000011743LSM510098.387ENSDARG00000071573lsm510098.387Danio_rerio
ENSAPOG00000011743LSM59486.207ENSDNOG00000049495-9084.146Dasypus_novemcinctus
ENSAPOG00000011743LSM510096.774ENSDNOG00000034958LSM510091.011Dasypus_novemcinctus
ENSAPOG00000011743LSM510096.774ENSDORG00000009422Lsm59095.122Dipodomys_ordii
ENSAPOG00000011743LSM59883.607FBgn0035675CG66108979.012Drosophila_melanogaster
ENSAPOG00000011743LSM510096.774ENSETEG00000018068LSM59095.122Echinops_telfairi
ENSAPOG00000011743LSM510075.806ENSETEG00000016074-8177.778Echinops_telfairi
ENSAPOG00000011743LSM510070.968ENSETEG00000001469-8770.370Echinops_telfairi
ENSAPOG00000011743LSM510075.806ENSETEG00000010651-8772.500Echinops_telfairi
ENSAPOG00000011743LSM58965.823ENSETEG00000000777-9065.823Echinops_telfairi
ENSAPOG00000011743LSM510093.548ENSEBUG00000008540lsm59092.683Eptatretus_burgeri
ENSAPOG00000011743LSM510096.774ENSEASG00005003500LSM59095.122Equus_asinus_asinus
ENSAPOG00000011743LSM510075.806ENSECAG00000018445LSM58979.268Equus_caballus
ENSAPOG00000011743LSM59491.379ENSEEUG00000004102LSM59791.379Erinaceus_europaeus
ENSAPOG00000011743LSM510098.387ENSELUG00000007792lsm59095.122Esox_lucius
ENSAPOG00000011743LSM510096.774ENSFCAG00000000230LSM59095.122Felis_catus
ENSAPOG00000011743LSM510096.774ENSFALG00000001892LSM58197.015Ficedula_albicollis
ENSAPOG00000011743LSM510096.774ENSFDAG00000008767LSM59095.122Fukomys_damarensis
ENSAPOG00000011743LSM510069.355ENSFDAG00000008685-8966.667Fukomys_damarensis
ENSAPOG00000011743LSM510085.484ENSFHEG00000004011lsm57285.075Fundulus_heteroclitus
ENSAPOG00000011743LSM598100.000ENSGMOG00000018235lsm59196.341Gadus_morhua
ENSAPOG00000011743LSM510096.774ENSGALG00000041625LSM59093.902Gallus_gallus
ENSAPOG00000011743LSM5100100.000ENSGAFG00000016824lsm5100100.000Gambusia_affinis
ENSAPOG00000011743LSM5100100.000ENSGACG00000005528lsm59097.561Gasterosteus_aculeatus
ENSAPOG00000011743LSM510096.774ENSGAGG00000015593LSM59095.122Gopherus_agassizii
ENSAPOG00000011743LSM510096.774ENSGGOG00000043469LSM59095.122Gorilla_gorilla
ENSAPOG00000011743LSM5100100.000ENSHBUG00000013773lsm58996.154Haplochromis_burtoni
ENSAPOG00000011743LSM510096.774ENSHGLG00000011765LSM59095.122Heterocephalus_glaber_female
ENSAPOG00000011743LSM510096.774ENSHGLG00100015610LSM59091.463Heterocephalus_glaber_male
ENSAPOG00000011743LSM57393.333ENSHCOG00000008288lsm57693.333Hippocampus_comes
ENSAPOG00000011743LSM510098.387ENSIPUG00000021095LSM59093.902Ictalurus_punctatus
ENSAPOG00000011743LSM510083.871ENSSTOG00000033886-8780.519Ictidomys_tridecemlineatus
ENSAPOG00000011743LSM510096.774ENSSTOG00000012662LSM59095.122Ictidomys_tridecemlineatus
ENSAPOG00000011743LSM58988.608ENSJJAG00000004475-10088.608Jaculus_jaculus
ENSAPOG00000011743LSM510077.419ENSJJAG00000016144-7577.419Jaculus_jaculus
ENSAPOG00000011743LSM510096.774ENSJJAG00000012145-9092.683Jaculus_jaculus
ENSAPOG00000011743LSM510098.387ENSKMAG00000021861lsm59097.561Kryptolebias_marmoratus
ENSAPOG00000011743LSM56383.929ENSLBEG00000017379lsm59283.929Labrus_bergylta
ENSAPOG00000011743LSM59297.561ENSLBEG00000009235LSM56597.561Labrus_bergylta
ENSAPOG00000011743LSM510096.774ENSLACG00000022448LSM59093.902Latimeria_chalumnae
ENSAPOG00000011743LSM510098.387ENSLOCG00000012903lsm59093.902Lepisosteus_oculatus
ENSAPOG00000011743LSM510096.774ENSLAFG00000029579LSM59095.122Loxodonta_africana
ENSAPOG00000011743LSM59484.483ENSLAFG00000027938-7384.483Loxodonta_africana
ENSAPOG00000011743LSM510095.161ENSMFAG00000030152-9092.683Macaca_fascicularis
ENSAPOG00000011743LSM55491.667ENSMFAG00000031187-8191.667Macaca_fascicularis
ENSAPOG00000011743LSM510096.774ENSMFAG00000038508LSM59095.122Macaca_fascicularis
ENSAPOG00000011743LSM510083.871ENSMMUG00000039822-8983.951Macaca_mulatta
ENSAPOG00000011743LSM55886.538ENSMMUG00000045129-8186.538Macaca_mulatta
ENSAPOG00000011743LSM510095.161ENSMMUG00000030131-9092.683Macaca_mulatta
ENSAPOG00000011743LSM510095.161ENSMNEG00000037935-9092.683Macaca_nemestrina
ENSAPOG00000011743LSM510096.774ENSMNEG00000015331LSM510096.774Macaca_nemestrina
ENSAPOG00000011743LSM510096.774ENSMLEG00000024945LSM59095.122Mandrillus_leucophaeus
ENSAPOG00000011743LSM510082.258ENSMLEG00000034037-8982.500Mandrillus_leucophaeus
ENSAPOG00000011743LSM510093.548ENSMAMG00000012869lsm59091.463Mastacembelus_armatus
ENSAPOG00000011743LSM5100100.000ENSMZEG00005019554lsm58996.154Maylandia_zebra
ENSAPOG00000011743LSM510096.774ENSMGAG00000012117LSM59093.902Meleagris_gallopavo
ENSAPOG00000011743LSM510096.774ENSMAUG00000008132-9093.902Mesocricetus_auratus
ENSAPOG00000011743LSM510096.774ENSMAUG00000012222Lsm59095.122Mesocricetus_auratus
ENSAPOG00000011743LSM59596.610ENSMICG00000033928-7796.610Microcebus_murinus
ENSAPOG00000011743LSM510096.774ENSMICG00000005353LSM59095.122Microcebus_murinus
ENSAPOG00000011743LSM510096.774ENSMOCG00000012018Lsm59095.122Microtus_ochrogaster
ENSAPOG00000011743LSM5100100.000ENSMMOG00000004026lsm57798.507Mola_mola
ENSAPOG00000011743LSM510096.774ENSMODG00000013274-10096.774Monodelphis_domestica
ENSAPOG00000011743LSM510093.548ENSMALG00000010343lsm510093.548Monopterus_albus
ENSAPOG00000011743LSM510096.774MGP_CAROLIEiJ_G0028421Lsm59897.561Mus_caroli
ENSAPOG00000011743LSM510096.774ENSMUSG00000091625Lsm59897.561Mus_musculus
ENSAPOG00000011743LSM510096.774MGP_PahariEiJ_G0022171Lsm59897.561Mus_pahari
ENSAPOG00000011743LSM510096.774MGP_SPRETEiJ_G0029423Lsm59897.561Mus_spretus
ENSAPOG00000011743LSM510096.774ENSMLUG00000017028LSM59095.122Myotis_lucifugus
ENSAPOG00000011743LSM58789.286ENSNGAG00000017707-9082.143Nannospalax_galili
ENSAPOG00000011743LSM57989.796ENSNGAG00000022569-8475.000Nannospalax_galili
ENSAPOG00000011743LSM510096.774ENSNGAG00000024142Lsm59095.122Nannospalax_galili
ENSAPOG00000011743LSM59298.246ENSNBRG00000011386lsm57698.246Neolamprologus_brichardi
ENSAPOG00000011743LSM55191.111ENSNBRG00000009964LSM59691.111Neolamprologus_brichardi
ENSAPOG00000011743LSM510096.774ENSNLEG00000015268LSM59095.122Nomascus_leucogenys
ENSAPOG00000011743LSM510096.774ENSOPRG00000002443LSM58896.970Ochotona_princeps
ENSAPOG00000011743LSM510096.774ENSODEG00000008258-9095.122Octodon_degus
ENSAPOG00000011743LSM510096.774ENSODEG00000019072-9095.122Octodon_degus
ENSAPOG00000011743LSM59456.897ENSOANG00000014540-9358.571Ornithorhynchus_anatinus
ENSAPOG00000011743LSM510096.774ENSOCUG00000029043LSM59095.122Oryctolagus_cuniculus
ENSAPOG00000011743LSM510098.387ENSORLG00000027725lsm55397.561Oryzias_latipes
ENSAPOG00000011743LSM510098.387ENSORLG00020003019lsm58198.780Oryzias_latipes_hni
ENSAPOG00000011743LSM510098.387ENSORLG00015003338lsm59097.561Oryzias_latipes_hsok
ENSAPOG00000011743LSM510098.387ENSOMEG00000001078lsm59096.341Oryzias_melastigma
ENSAPOG00000011743LSM510096.774ENSOGAG00000013892LSM59095.122Otolemur_garnettii
ENSAPOG00000011743LSM510096.774ENSOARG00000006944LSM59095.122Ovis_aries
ENSAPOG00000011743LSM510096.774ENSPPAG00000003697-9095.122Pan_paniscus
ENSAPOG00000011743LSM510096.774ENSPPRG00000002550LSM59095.122Panthera_pardus
ENSAPOG00000011743LSM510096.774ENSPTIG00000015604LSM59095.122Panthera_tigris_altaica
ENSAPOG00000011743LSM510072.581ENSPTRG00000049488-9079.268Pan_troglodytes
ENSAPOG00000011743LSM510096.774ENSPTRG00000019057LSM59095.122Pan_troglodytes
ENSAPOG00000011743LSM510096.774ENSPANG00000032179-9095.122Papio_anubis
ENSAPOG00000011743LSM510095.161ENSPANG00000033477-9091.463Papio_anubis
ENSAPOG00000011743LSM510083.871ENSPANG00000032538-8983.951Papio_anubis
ENSAPOG00000011743LSM510098.387ENSPKIG00000011910lsm59096.341Paramormyrops_kingsleyae
ENSAPOG00000011743LSM59796.667ENSPSIG00000014796LSM59197.015Pelodiscus_sinensis
ENSAPOG00000011743LSM5100100.000ENSPMGG00000011699lsm5100100.000Periophthalmus_magnuspinnatus
ENSAPOG00000011743LSM510070.968ENSPEMG00000022375-8967.073Peromyscus_maniculatus_bairdii
ENSAPOG00000011743LSM55393.617ENSPEMG00000019994-8093.617Peromyscus_maniculatus_bairdii
ENSAPOG00000011743LSM5100100.000ENSPFOG00000001433lsm59096.341Poecilia_formosa
ENSAPOG00000011743LSM5100100.000ENSPLAG00000009665lsm59096.341Poecilia_latipinna
ENSAPOG00000011743LSM5100100.000ENSPMEG00000022265lsm59096.341Poecilia_mexicana
ENSAPOG00000011743LSM5100100.000ENSPREG00000022452lsm5100100.000Poecilia_reticulata
ENSAPOG00000011743LSM510091.935ENSPPYG00000017661LSM59091.463Pongo_abelii
ENSAPOG00000011743LSM59196.296ENSPCAG00000013740LSM510096.296Procavia_capensis
ENSAPOG00000011743LSM510096.774ENSPVAG00000009786LSM59095.122Pteropus_vampyrus
ENSAPOG00000011743LSM5100100.000ENSPNYG00000022236lsm58996.154Pundamilia_nyererei
ENSAPOG00000011743LSM510098.387ENSPNAG00000001887lsm59093.902Pygocentrus_nattereri
ENSAPOG00000011743LSM510096.774ENSRNOG00000042126Lsm59095.122Rattus_norvegicus
ENSAPOG00000011743LSM510095.238ENSRNOG00000027305AABR07065089.19091.566Rattus_norvegicus
ENSAPOG00000011743LSM510096.774ENSRBIG00000030340-9095.122Rhinopithecus_bieti
ENSAPOG00000011743LSM510096.774ENSRBIG00000027803-10096.774Rhinopithecus_bieti
ENSAPOG00000011743LSM510096.774ENSRBIG00000030714-9095.122Rhinopithecus_bieti
ENSAPOG00000011743LSM510095.161ENSRBIG00000024431-9093.902Rhinopithecus_bieti
ENSAPOG00000011743LSM510096.774ENSRROG00000004655-9095.122Rhinopithecus_roxellana
ENSAPOG00000011743LSM510096.774ENSRROG00000042782-10096.774Rhinopithecus_roxellana
ENSAPOG00000011743LSM510096.774ENSRROG00000023884-9095.122Rhinopithecus_roxellana
ENSAPOG00000011743LSM59449.206YER146W-8346.753Saccharomyces_cerevisiae
ENSAPOG00000011743LSM510096.774ENSSBOG00000012312LSM59095.122Saimiri_boliviensis_boliviensis
ENSAPOG00000011743LSM510095.161ENSSBOG00000019124-9093.902Saimiri_boliviensis_boliviensis
ENSAPOG00000011743LSM510085.484ENSSBOG00000034794-7785.484Saimiri_boliviensis_boliviensis
ENSAPOG00000011743LSM510098.387ENSSFOG00015010099lsm59096.341Scleropages_formosus
ENSAPOG00000011743LSM57395.556ENSSMAG00000007895lsm57695.556Scophthalmus_maximus
ENSAPOG00000011743LSM5100100.000ENSSDUG00000010762lsm5100100.000Seriola_dumerili
ENSAPOG00000011743LSM59475.862ENSSLDG00000008014-8776.712Seriola_lalandi_dorsalis
ENSAPOG00000011743LSM5100100.000ENSSLDG00000025242lsm59097.561Seriola_lalandi_dorsalis
ENSAPOG00000011743LSM510056.452ENSSARG00000003330LSM56292.857Sorex_araneus
ENSAPOG00000011743LSM510095.161ENSSPUG00000002690LSM510095.161Sphenodon_punctatus
ENSAPOG00000011743LSM57395.556ENSSPAG00000005435lsm57695.556Stegastes_partitus
ENSAPOG00000011743LSM57884.058ENSSSCG00000029661-9684.058Sus_scrofa
ENSAPOG00000011743LSM510096.774ENSSSCG00000026064-9095.122Sus_scrofa
ENSAPOG00000011743LSM510096.774ENSTGUG00000017539LSM59092.683Taeniopygia_guttata
ENSAPOG00000011743LSM59884.783ENSTRUG00000017749lsm56984.783Takifugu_rubripes
ENSAPOG00000011743LSM510098.387ENSTNIG00000008695lsm59093.902Tetraodon_nigroviridis
ENSAPOG00000011743LSM510096.774ENSTBEG00000004876LSM59095.122Tupaia_belangeri
ENSAPOG00000011743LSM510096.774ENSTTRG00000004237LSM59095.122Tursiops_truncatus
ENSAPOG00000011743LSM55886.538ENSUAMG00000009786LSM56886.538Ursus_americanus
ENSAPOG00000011743LSM59896.721ENSUMAG00000002625LSM55995.122Ursus_maritimus
ENSAPOG00000011743LSM510096.774ENSVPAG00000009985LSM59095.122Vicugna_pacos
ENSAPOG00000011743LSM510096.774ENSVVUG00000021311LSM59095.122Vulpes_vulpes
ENSAPOG00000011743LSM59296.341ENSXETG00000026465lsm510096.341Xenopus_tropicalis
ENSAPOG00000011743LSM5100100.000ENSXCOG00000015348lsm5100100.000Xiphophorus_couchianus
ENSAPOG00000011743LSM5100100.000ENSXMAG00000029988lsm59096.341Xiphophorus_maculatus

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