EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000011894 (Gene tree)
Gene ID: 110968664
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 30814 bases
Position: chrMVNR01002130.1:23902-54715
Accession: 110968664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000009552	SF3b1	PF08920.10	1.7e-47	1	1
ENSAPOP00000027355	SF3b1	PF08920.10	2.3e-47	1	1
ENSAPOP00000009595	SF3b1	PF08920.10	2.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000001331	-	6442	-	ENSAPOP00000009552	1256 (aa)	-	-
ENSAPOT00000001387	-	5082	XM_022218603	ENSAPOP00000027355	1315 (aa)	XP_022074295	UPI000B8F9091
ENSAPOT00000001291	-	4733	-	ENSAPOP00000009595	1338 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000011894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000011894's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000011894	sf3b1	100	93.622	ENSG00000115524	SF3B1	100	93.622	Homo_sapiens
ENSAPOG00000011894	sf3b1	99	93.506	ENSAMEG00000013809	SF3B1	99	93.645	Ailuropoda_melanoleuca
ENSAPOG00000011894	sf3b1	100	97.795	ENSACIG00000020910	sf3b1	97	97.795	Amphilophus_citrinellus
ENSAPOG00000011894	sf3b1	100	99.848	ENSAOCG00000004478	sf3b1	100	99.848	Amphiprion_ocellaris
ENSAPOG00000011894	sf3b1	100	99.848	ENSAPEG00000012937	sf3b1	100	99.848	Amphiprion_percula
ENSAPOG00000011894	sf3b1	100	99.240	ENSATEG00000020435	sf3b1	100	99.240	Anabas_testudineus
ENSAPOG00000011894	sf3b1	99	93.798	ENSAPLG00000003993	SF3B1	99	93.937	Anas_platyrhynchos
ENSAPOG00000011894	sf3b1	100	93.541	ENSACAG00000009612	SF3B1	100	93.541	Anolis_carolinensis
ENSAPOG00000011894	sf3b1	100	93.622	ENSANAG00000021577	SF3B1	100	94.953	Aotus_nancymaae
ENSAPOG00000011894	sf3b1	100	98.099	ENSACLG00000023470	sf3b1	100	98.099	Astatotilapia_calliptera
ENSAPOG00000011894	sf3b1	100	97.112	ENSAMXG00000002219	sf3b1	100	97.112	Astyanax_mexicanus
ENSAPOG00000011894	sf3b1	100	93.622	ENSBTAG00000008915	SF3B1	100	93.622	Bos_taurus
ENSAPOG00000011894	sf3b1	98	65.243	WBGene00011605	sftb-1	97	65.465	Caenorhabditis_elegans
ENSAPOG00000011894	sf3b1	100	93.622	ENSCJAG00000003902	SF3B1	100	93.622	Callithrix_jacchus
ENSAPOG00000011894	sf3b1	100	93.622	ENSCAFG00000010826	SF3B1	100	93.622	Canis_familiaris
ENSAPOG00000011894	sf3b1	100	93.622	ENSCAFG00020004750	SF3B1	100	93.622	Canis_lupus_dingo
ENSAPOG00000011894	sf3b1	100	93.622	ENSCHIG00000015226	SF3B1	100	93.622	Capra_hircus
ENSAPOG00000011894	sf3b1	100	93.546	ENSTSYG00000009214	SF3B1	100	93.546	Carlito_syrichta
ENSAPOG00000011894	sf3b1	99	93.450	ENSCAPG00000006547	SF3B1	99	93.588	Cavia_aperea
ENSAPOG00000011894	sf3b1	99	93.573	ENSCPOG00000009353	SF3B1	100	93.573	Cavia_porcellus
ENSAPOG00000011894	sf3b1	100	93.622	ENSCCAG00000020506	SF3B1	100	93.622	Cebus_capucinus
ENSAPOG00000011894	sf3b1	100	93.622	ENSCATG00000035735	SF3B1	100	93.622	Cercocebus_atys
ENSAPOG00000011894	sf3b1	99	93.578	ENSCLAG00000014767	SF3B1	99	93.716	Chinchilla_lanigera
ENSAPOG00000011894	sf3b1	100	93.622	ENSCSAG00000011505	SF3B1	100	93.622	Chlorocebus_sabaeus
ENSAPOG00000011894	sf3b1	76	92.588	ENSCHOG00000009860	SF3B1	76	92.588	Choloepus_hoffmanni
ENSAPOG00000011894	sf3b1	100	93.612	ENSCPBG00000021902	SF3B1	99	94.857	Chrysemys_picta_bellii
ENSAPOG00000011894	sf3b1	72	77.972	ENSCING00000002558	-	99	78.319	Ciona_intestinalis
ENSAPOG00000011894	sf3b1	99	80.075	ENSCSAVG00000002559	-	99	80.106	Ciona_savignyi
ENSAPOG00000011894	sf3b1	100	93.622	ENSCANG00000029415	SF3B1	100	93.622	Colobus_angolensis_palliatus
ENSAPOG00000011894	sf3b1	100	93.622	ENSCGRG00001016990	Sf3b1	100	93.622	Cricetulus_griseus_chok1gshd
ENSAPOG00000011894	sf3b1	100	93.622	ENSCGRG00000005301	Sf3b1	100	93.622	Cricetulus_griseus_crigri
ENSAPOG00000011894	sf3b1	100	94.297	ENSCSEG00000003860	sf3b1	100	94.297	Cynoglossus_semilaevis
ENSAPOG00000011894	sf3b1	96	98.418	ENSCVAG00000003680	sf3b1	99	98.418	Cyprinodon_variegatus
ENSAPOG00000011894	sf3b1	100	95.821	ENSDARG00000056138	sf3b1	100	95.821	Danio_rerio
ENSAPOG00000011894	sf3b1	100	93.551	ENSDNOG00000011754	SF3B1	100	93.551	Dasypus_novemcinctus
ENSAPOG00000011894	sf3b1	99	91.737	ENSDORG00000002399	Sf3b1	100	91.660	Dipodomys_ordii
ENSAPOG00000011894	sf3b1	100	75.806	FBgn0031266	Sf3b1	100	75.806	Drosophila_melanogaster
ENSAPOG00000011894	sf3b1	87	92.301	ENSETEG00000009188	SF3B1	100	92.301	Echinops_telfairi
ENSAPOG00000011894	sf3b1	99	85.823	ENSEBUG00000004325	sf3b1	100	88.640	Eptatretus_burgeri
ENSAPOG00000011894	sf3b1	100	93.622	ENSEASG00005020159	SF3B1	98	93.622	Equus_asinus_asinus
ENSAPOG00000011894	sf3b1	100	93.622	ENSECAG00000021657	SF3B1	98	93.622	Equus_caballus
ENSAPOG00000011894	sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSAPOG00000011894	sf3b1	100	96.450	ENSELUG00000005977	sf3b1	98	96.450	Esox_lucius
ENSAPOG00000011894	sf3b1	100	93.622	ENSFCAG00000005038	SF3B1	100	93.622	Felis_catus
ENSAPOG00000011894	sf3b1	99	93.874	ENSFALG00000004281	SF3B1	99	94.014	Ficedula_albicollis
ENSAPOG00000011894	sf3b1	100	93.622	ENSFDAG00000017510	SF3B1	100	93.622	Fukomys_damarensis
ENSAPOG00000011894	sf3b1	100	97.872	ENSFHEG00000014333	sf3b1	100	97.872	Fundulus_heteroclitus
ENSAPOG00000011894	sf3b1	100	96.434	ENSGMOG00000006773	sf3b1	100	96.434	Gadus_morhua
ENSAPOG00000011894	sf3b1	100	93.840	ENSGALG00000008038	SF3B1	100	93.840	Gallus_gallus
ENSAPOG00000011894	sf3b1	98	98.457	ENSGAFG00000000704	sf3b1	100	98.457	Gambusia_affinis
ENSAPOG00000011894	sf3b1	100	97.418	ENSGACG00000008839	sf3b1	100	97.418	Gasterosteus_aculeatus
ENSAPOG00000011894	sf3b1	100	92.976	ENSGAGG00000017478	SF3B1	100	92.976	Gopherus_agassizii
ENSAPOG00000011894	sf3b1	99	88.370	ENSGGOG00000009264	SF3B1	99	88.650	Gorilla_gorilla
ENSAPOG00000011894	sf3b1	99	98.172	ENSHBUG00000007705	sf3b1	100	98.021	Haplochromis_burtoni
ENSAPOG00000011894	sf3b1	99	93.578	ENSHGLG00000008285	-	99	93.716	Heterocephalus_glaber_female
ENSAPOG00000011894	sf3b1	99	91.590	ENSHGLG00100005535	-	99	91.724	Heterocephalus_glaber_male
ENSAPOG00000011894	sf3b1	100	97.428	ENSHCOG00000016775	sf3b1	100	97.428	Hippocampus_comes
ENSAPOG00000011894	sf3b1	100	96.806	ENSIPUG00000013171	sf3b1	100	96.806	Ictalurus_punctatus
ENSAPOG00000011894	sf3b1	100	93.622	ENSSTOG00000011034	SF3B1	100	93.622	Ictidomys_tridecemlineatus
ENSAPOG00000011894	sf3b1	99	93.553	ENSJJAG00000010903	Sf3b1	99	93.692	Jaculus_jaculus
ENSAPOG00000011894	sf3b1	100	97.800	ENSKMAG00000004009	sf3b1	100	97.800	Kryptolebias_marmoratus
ENSAPOG00000011894	sf3b1	100	97.414	ENSLBEG00000022208	sf3b1	100	97.414	Labrus_bergylta
ENSAPOG00000011894	sf3b1	99	90.418	ENSLACG00000014832	SF3B1	99	90.549	Latimeria_chalumnae
ENSAPOG00000011894	sf3b1	100	95.537	ENSLOCG00000003899	sf3b1	100	95.537	Lepisosteus_oculatus
ENSAPOG00000011894	sf3b1	100	93.622	ENSLAFG00000001956	SF3B1	100	93.622	Loxodonta_africana
ENSAPOG00000011894	sf3b1	99	93.578	ENSMMUG00000022430	SF3B1	99	93.716	Macaca_mulatta
ENSAPOG00000011894	sf3b1	100	93.622	ENSMNEG00000042333	SF3B1	100	94.953	Macaca_nemestrina
ENSAPOG00000011894	sf3b1	94	88.656	ENSMLEG00000026141	SF3B1	98	88.710	Mandrillus_leucophaeus
ENSAPOG00000011894	sf3b1	100	99.163	ENSMAMG00000010241	sf3b1	100	99.163	Mastacembelus_armatus
ENSAPOG00000011894	sf3b1	100	98.099	ENSMZEG00005021254	sf3b1	100	98.099	Maylandia_zebra
ENSAPOG00000011894	sf3b1	99	93.185	ENSMGAG00000007017	SF3B1	99	93.323	Meleagris_gallopavo
ENSAPOG00000011894	sf3b1	99	89.373	ENSMAUG00000009071	Sf3b1	99	89.502	Mesocricetus_auratus
ENSAPOG00000011894	sf3b1	100	93.622	ENSMICG00000013879	SF3B1	100	93.622	Microcebus_murinus
ENSAPOG00000011894	sf3b1	99	89.305	ENSMOCG00000000455	Sf3b1	99	89.433	Microtus_ochrogaster
ENSAPOG00000011894	sf3b1	88	98.364	ENSMMOG00000000475	sf3b1	100	98.364	Mola_mola
ENSAPOG00000011894	sf3b1	100	92.938	ENSMODG00000012275	SF3B1	100	92.938	Monodelphis_domestica
ENSAPOG00000011894	sf3b1	100	98.935	ENSMALG00000017211	sf3b1	100	98.935	Monopterus_albus
ENSAPOG00000011894	sf3b1	100	93.622	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.622	Mus_caroli
ENSAPOG00000011894	sf3b1	100	93.622	ENSMUSG00000025982	Sf3b1	100	93.622	Mus_musculus
ENSAPOG00000011894	sf3b1	100	93.622	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.622	Mus_spretus
ENSAPOG00000011894	sf3b1	100	93.622	ENSMPUG00000007799	SF3B1	100	93.622	Mustela_putorius_furo
ENSAPOG00000011894	sf3b1	100	92.483	ENSMLUG00000000840	SF3B1	100	92.483	Myotis_lucifugus
ENSAPOG00000011894	sf3b1	99	93.298	ENSNGAG00000021884	-	100	93.298	Nannospalax_galili
ENSAPOG00000011894	sf3b1	100	93.009	ENSNBRG00000015816	sf3b1	100	93.009	Neolamprologus_brichardi
ENSAPOG00000011894	sf3b1	100	93.622	ENSNLEG00000006861	SF3B1	100	93.622	Nomascus_leucogenys
ENSAPOG00000011894	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSAPOG00000011894	sf3b1	100	81.129	ENSOPRG00000008596	SF3B1	100	81.278	Ochotona_princeps
ENSAPOG00000011894	sf3b1	100	93.622	ENSODEG00000011153	-	100	93.622	Octodon_degus
ENSAPOG00000011894	sf3b1	100	98.099	ENSONIG00000013758	sf3b1	100	98.099	Oreochromis_niloticus
ENSAPOG00000011894	sf3b1	82	96.218	ENSOCUG00000012722	-	96	96.218	Oryctolagus_cuniculus
ENSAPOG00000011894	sf3b1	100	97.947	ENSORLG00000020219	sf3b1	100	97.947	Oryzias_latipes
ENSAPOG00000011894	sf3b1	100	97.947	ENSORLG00020001746	sf3b1	100	97.947	Oryzias_latipes_hni
ENSAPOG00000011894	sf3b1	67	96.445	ENSORLG00015001759	sf3b1	98	96.445	Oryzias_latipes_hsok
ENSAPOG00000011894	sf3b1	100	98.404	ENSOMEG00000019231	sf3b1	100	98.404	Oryzias_melastigma
ENSAPOG00000011894	sf3b1	51	73.107	ENSOGAG00000000267	-	100	73.107	Otolemur_garnettii
ENSAPOG00000011894	sf3b1	100	93.622	ENSOARG00000015374	SF3B1	100	93.622	Ovis_aries
ENSAPOG00000011894	sf3b1	100	93.622	ENSPPAG00000035007	SF3B1	100	93.622	Pan_paniscus
ENSAPOG00000011894	sf3b1	100	93.622	ENSPPRG00000009090	SF3B1	100	93.622	Panthera_pardus
ENSAPOG00000011894	sf3b1	100	93.622	ENSPTIG00000021557	SF3B1	100	93.622	Panthera_tigris_altaica
ENSAPOG00000011894	sf3b1	99	86.117	ENSPTRG00000012771	SF3B1	99	86.239	Pan_troglodytes
ENSAPOG00000011894	sf3b1	100	93.622	ENSPANG00000013417	SF3B1	100	93.622	Papio_anubis
ENSAPOG00000011894	sf3b1	100	96.431	ENSPKIG00000000784	sf3b1	100	96.431	Paramormyrops_kingsleyae
ENSAPOG00000011894	sf3b1	99	92.567	ENSPSIG00000017222	SF3B1	98	92.704	Pelodiscus_sinensis
ENSAPOG00000011894	sf3b1	96	96.924	ENSPMGG00000004330	sf3b1	99	97.567	Periophthalmus_magnuspinnatus
ENSAPOG00000011894	sf3b1	99	93.578	ENSPEMG00000010699	Sf3b1	100	93.578	Peromyscus_maniculatus_bairdii
ENSAPOG00000011894	sf3b1	100	88.520	ENSPMAG00000001311	sf3b1	100	88.822	Petromyzon_marinus
ENSAPOG00000011894	sf3b1	100	92.938	ENSPCIG00000010642	SF3B1	100	92.938	Phascolarctos_cinereus
ENSAPOG00000011894	sf3b1	100	98.557	ENSPFOG00000000073	sf3b1	100	98.557	Poecilia_formosa
ENSAPOG00000011894	sf3b1	100	98.556	ENSPLAG00000002293	sf3b1	100	98.556	Poecilia_latipinna
ENSAPOG00000011894	sf3b1	100	98.632	ENSPMEG00000000446	sf3b1	98	98.632	Poecilia_mexicana
ENSAPOG00000011894	sf3b1	100	98.708	ENSPREG00000019652	sf3b1	100	98.708	Poecilia_reticulata
ENSAPOG00000011894	sf3b1	82	97.138	ENSPPYG00000013044	SF3B1	95	97.315	Pongo_abelii
ENSAPOG00000011894	sf3b1	100	93.470	ENSPCAG00000009292	SF3B1	100	93.470	Procavia_capensis
ENSAPOG00000011894	sf3b1	100	93.622	ENSPCOG00000024074	SF3B1	100	93.622	Propithecus_coquereli
ENSAPOG00000011894	sf3b1	100	93.622	ENSPVAG00000008302	SF3B1	100	93.622	Pteropus_vampyrus
ENSAPOG00000011894	sf3b1	100	98.023	ENSPNYG00000014939	sf3b1	100	98.023	Pundamilia_nyererei
ENSAPOG00000011894	sf3b1	100	96.884	ENSPNAG00000008288	sf3b1	100	96.884	Pygocentrus_nattereri
ENSAPOG00000011894	sf3b1	100	93.622	ENSRNOG00000013516	Sf3b1	100	93.622	Rattus_norvegicus
ENSAPOG00000011894	sf3b1	99	89.886	ENSRBIG00000026096	SF3B1	100	89.886	Rhinopithecus_bieti
ENSAPOG00000011894	sf3b1	100	93.622	ENSRROG00000031308	SF3B1	100	93.622	Rhinopithecus_roxellana
ENSAPOG00000011894	sf3b1	100	93.622	ENSSBOG00000020080	SF3B1	100	93.622	Saimiri_boliviensis_boliviensis
ENSAPOG00000011894	sf3b1	100	92.938	ENSSHAG00000017564	SF3B1	100	92.938	Sarcophilus_harrisii
ENSAPOG00000011894	sf3b1	100	96.578	ENSSFOG00015021535	sf3b1	100	96.578	Scleropages_formosus
ENSAPOG00000011894	sf3b1	99	97.800	ENSSMAG00000013977	sf3b1	99	97.800	Scophthalmus_maximus
ENSAPOG00000011894	sf3b1	100	99.011	ENSSDUG00000017422	sf3b1	100	99.011	Seriola_dumerili
ENSAPOG00000011894	sf3b1	100	98.935	ENSSLDG00000019495	sf3b1	100	98.935	Seriola_lalandi_dorsalis
ENSAPOG00000011894	sf3b1	75	98.944	ENSSARG00000007016	SF3B1	75	99.292	Sorex_araneus
ENSAPOG00000011894	sf3b1	100	93.460	ENSSPUG00000000410	SF3B1	100	93.460	Sphenodon_punctatus
ENSAPOG00000011894	sf3b1	100	99.468	ENSSPAG00000010451	sf3b1	99	99.468	Stegastes_partitus
ENSAPOG00000011894	sf3b1	95	93.462	ENSSSCG00000016075	SF3B1	100	94.953	Sus_scrofa
ENSAPOG00000011894	sf3b1	100	93.840	ENSTGUG00000010553	SF3B1	100	93.840	Taeniopygia_guttata
ENSAPOG00000011894	sf3b1	100	97.947	ENSTRUG00000015534	sf3b1	100	97.947	Takifugu_rubripes
ENSAPOG00000011894	sf3b1	91	97.185	ENSTBEG00000008714	SF3B1	93	97.211	Tupaia_belangeri
ENSAPOG00000011894	sf3b1	92	93.426	ENSTTRG00000003414	SF3B1	92	93.655	Tursiops_truncatus
ENSAPOG00000011894	sf3b1	94	83.604	ENSUAMG00000018506	SF3B1	99	98.371	Ursus_americanus
ENSAPOG00000011894	sf3b1	100	93.622	ENSUMAG00000020945	SF3B1	100	93.622	Ursus_maritimus
ENSAPOG00000011894	sf3b1	95	93.561	ENSVPAG00000005798	SF3B1	96	93.561	Vicugna_pacos
ENSAPOG00000011894	sf3b1	100	93.622	ENSVVUG00000025948	SF3B1	95	93.622	Vulpes_vulpes
ENSAPOG00000011894	sf3b1	100	92.103	ENSXETG00000013339	sf3b1	100	92.103	Xenopus_tropicalis
ENSAPOG00000011894	sf3b1	100	93.997	ENSXCOG00000018086	sf3b1	100	94.301	Xiphophorus_couchianus
ENSAPOG00000011894	sf3b1	100	98.480	ENSXMAG00000007369	sf3b1	100	98.480	Xiphophorus_maculatus