EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000011942 (Gene tree)
Gene ID: 110956868
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 7376 bases
Position: chrMVNR01000500.1:199478-206853
Accession: 110956868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000009647	HVSL	PF09749.9	1.4e-61	1	1
ENSAPOP00000009630	HVSL	PF09749.9	2.1e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000001226	-	1969	-	ENSAPOP00000009630	262 (aa)	-	-
ENSAPOT00000001213	-	2023	XM_022202610	ENSAPOP00000009647	280 (aa)	XP_022058302	UPI000B8F8A07

Gene Model

Click here to download ENSAPOG00000011942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000011942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000011942	usb1	83	51.073	ENSG00000103005	USB1	100	53.271	Homo_sapiens
ENSAPOG00000011942	usb1	83	51.931	ENSAMEG00000017205	USB1	98	48.387	Ailuropoda_melanoleuca
ENSAPOG00000011942	usb1	84	77.637	ENSACIG00000012234	usb1	100	70.107	Amphilophus_citrinellus
ENSAPOG00000011942	usb1	99	90.391	ENSAOCG00000014831	usb1	99	90.391	Amphiprion_ocellaris
ENSAPOG00000011942	usb1	99	89.680	ENSAPEG00000000296	usb1	99	89.680	Amphiprion_percula
ENSAPOG00000011942	usb1	99	72.598	ENSATEG00000009348	usb1	99	73.852	Anabas_testudineus
ENSAPOG00000011942	usb1	79	54.222	ENSAPLG00000002756	USB1	99	54.222	Anas_platyrhynchos
ENSAPOG00000011942	usb1	80	51.316	ENSACAG00000015481	USB1	99	51.316	Anolis_carolinensis
ENSAPOG00000011942	usb1	81	51.101	ENSANAG00000035640	USB1	98	45.594	Aotus_nancymaae
ENSAPOG00000011942	usb1	92	77.043	ENSACLG00000020586	usb1	100	74.912	Astatotilapia_calliptera
ENSAPOG00000011942	usb1	80	66.964	ENSAMXG00000040146	usb1	95	57.388	Astyanax_mexicanus
ENSAPOG00000011942	usb1	99	47.312	ENSBTAG00000015758	USB1	98	47.312	Bos_taurus
ENSAPOG00000011942	usb1	81	52.423	ENSCJAG00000011733	USB1	98	46.595	Callithrix_jacchus
ENSAPOG00000011942	usb1	83	50.000	ENSCAFG00000008556	USB1	71	46.595	Canis_familiaris
ENSAPOG00000011942	usb1	80	51.327	ENSCAFG00020009263	USB1	85	51.327	Canis_lupus_dingo
ENSAPOG00000011942	usb1	99	46.595	ENSCHIG00000024290	USB1	98	46.595	Capra_hircus
ENSAPOG00000011942	usb1	81	51.982	ENSTSYG00000006997	USB1	98	47.670	Carlito_syrichta
ENSAPOG00000011942	usb1	78	45.631	ENSCAPG00000009057	USB1	96	45.631	Cavia_aperea
ENSAPOG00000011942	usb1	99	46.595	ENSCPOG00000014325	USB1	98	46.595	Cavia_porcellus
ENSAPOG00000011942	usb1	81	51.982	ENSCCAG00000022132	USB1	98	46.360	Cebus_capucinus
ENSAPOG00000011942	usb1	83	51.073	ENSCATG00000032174	USB1	98	46.360	Cercocebus_atys
ENSAPOG00000011942	usb1	61	51.445	ENSCLAG00000007363	USB1	87	52.941	Chinchilla_lanigera
ENSAPOG00000011942	usb1	83	50.644	ENSCSAG00000004783	USB1	98	45.878	Chlorocebus_sabaeus
ENSAPOG00000011942	usb1	82	54.348	ENSCPBG00000026943	USB1	98	50.000	Chrysemys_picta_bellii
ENSAPOG00000011942	usb1	89	31.034	ENSCSAVG00000000894	-	93	31.034	Ciona_savignyi
ENSAPOG00000011942	usb1	80	52.655	ENSCANG00000037135	USB1	86	52.655	Colobus_angolensis_palliatus
ENSAPOG00000011942	usb1	99	48.387	ENSCGRG00001011243	USB1	98	48.387	Cricetulus_griseus_chok1gshd
ENSAPOG00000011942	usb1	99	48.387	ENSCGRG00000013252	USB1	98	48.387	Cricetulus_griseus_crigri
ENSAPOG00000011942	usb1	99	67.857	ENSCSEG00000013881	usb1	99	67.857	Cynoglossus_semilaevis
ENSAPOG00000011942	usb1	80	73.568	ENSCVAG00000009252	usb1	97	73.568	Cyprinodon_variegatus
ENSAPOG00000011942	usb1	80	62.054	ENSDARG00000003841	usb1	100	54.643	Danio_rerio
ENSAPOG00000011942	usb1	99	47.143	ENSDORG00000001888	Usb1	98	48.399	Dipodomys_ordii
ENSAPOG00000011942	usb1	75	41.395	FBgn0037713	CG16790	81	39.437	Drosophila_melanogaster
ENSAPOG00000011942	usb1	99	40.502	ENSETEG00000019682	USB1	98	40.502	Echinops_telfairi
ENSAPOG00000011942	usb1	80	46.491	ENSEBUG00000005889	usb1	98	40.968	Eptatretus_burgeri
ENSAPOG00000011942	usb1	99	47.312	ENSEASG00005005484	USB1	98	47.670	Equus_asinus_asinus
ENSAPOG00000011942	usb1	99	47.122	ENSECAG00000019493	USB1	89	47.482	Equus_caballus
ENSAPOG00000011942	usb1	61	46.821	ENSEEUG00000000154	USB1	58	47.059	Erinaceus_europaeus
ENSAPOG00000011942	usb1	89	64.400	ENSELUG00000010974	usb1	99	61.071	Esox_lucius
ENSAPOG00000011942	usb1	83	50.215	ENSFCAG00000002693	USB1	98	46.595	Felis_catus
ENSAPOG00000011942	usb1	82	53.219	ENSFALG00000006876	USB1	98	47.331	Ficedula_albicollis
ENSAPOG00000011942	usb1	99	45.520	ENSFDAG00000010052	USB1	98	45.520	Fukomys_damarensis
ENSAPOG00000011942	usb1	88	67.600	ENSFHEG00000012334	usb1	97	69.200	Fundulus_heteroclitus
ENSAPOG00000011942	usb1	80	71.749	ENSGMOG00000004228	usb1	100	71.749	Gadus_morhua
ENSAPOG00000011942	usb1	79	56.054	ENSGALG00000035604	USB1	98	49.462	Gallus_gallus
ENSAPOG00000011942	usb1	100	71.579	ENSGAFG00000021890	usb1	99	71.579	Gambusia_affinis
ENSAPOG00000011942	usb1	99	67.025	ENSGACG00000003257	usb1	99	68.100	Gasterosteus_aculeatus
ENSAPOG00000011942	usb1	99	51.079	ENSGAGG00000022572	USB1	98	51.079	Gopherus_agassizii
ENSAPOG00000011942	usb1	82	51.163	ENSGGOG00000017147	USB1	98	46.360	Gorilla_gorilla
ENSAPOG00000011942	usb1	100	73.571	ENSHBUG00000009823	usb1	100	75.177	Haplochromis_burtoni
ENSAPOG00000011942	usb1	99	46.043	ENSHGLG00000016078	USB1	96	46.043	Heterocephalus_glaber_female
ENSAPOG00000011942	usb1	99	46.043	ENSHGLG00100005562	USB1	96	46.043	Heterocephalus_glaber_male
ENSAPOG00000011942	usb1	78	73.853	ENSHCOG00000015633	usb1	86	74.439	Hippocampus_comes
ENSAPOG00000011942	usb1	99	56.944	ENSIPUG00000008601	usb1	100	56.014	Ictalurus_punctatus
ENSAPOG00000011942	usb1	99	46.429	ENSSTOG00000007548	USB1	98	47.143	Ictidomys_tridecemlineatus
ENSAPOG00000011942	usb1	99	48.746	ENSJJAG00000021859	Usb1	98	48.746	Jaculus_jaculus
ENSAPOG00000011942	usb1	94	75.379	ENSKMAG00000007200	usb1	99	71.724	Kryptolebias_marmoratus
ENSAPOG00000011942	usb1	91	68.872	ENSLBEG00000008452	usb1	86	67.754	Labrus_bergylta
ENSAPOG00000011942	usb1	76	52.558	ENSLACG00000000105	USB1	83	51.883	Latimeria_chalumnae
ENSAPOG00000011942	usb1	95	52.060	ENSLOCG00000000465	usb1	99	50.865	Lepisosteus_oculatus
ENSAPOG00000011942	usb1	99	38.710	ENSLAFG00000002267	USB1	98	38.710	Loxodonta_africana
ENSAPOG00000011942	usb1	82	51.628	ENSMFAG00000003926	USB1	98	46.360	Macaca_fascicularis
ENSAPOG00000011942	usb1	82	51.628	ENSMMUG00000022669	USB1	98	46.360	Macaca_mulatta
ENSAPOG00000011942	usb1	82	51.163	ENSMNEG00000042487	USB1	98	45.977	Macaca_nemestrina
ENSAPOG00000011942	usb1	82	51.628	ENSMLEG00000028756	USB1	98	46.360	Mandrillus_leucophaeus
ENSAPOG00000011942	usb1	99	73.571	ENSMAMG00000015092	usb1	99	73.571	Mastacembelus_armatus
ENSAPOG00000011942	usb1	100	73.571	ENSMZEG00005010008	usb1	100	75.177	Maylandia_zebra
ENSAPOG00000011942	usb1	99	47.670	ENSMAUG00000007832	Usb1	98	47.670	Mesocricetus_auratus
ENSAPOG00000011942	usb1	81	52.863	ENSMICG00000004900	USB1	98	47.670	Microcebus_murinus
ENSAPOG00000011942	usb1	99	48.746	ENSMOCG00000022647	Usb1	98	48.746	Microtus_ochrogaster
ENSAPOG00000011942	usb1	80	74.107	ENSMMOG00000000490	usb1	96	68.826	Mola_mola
ENSAPOG00000011942	usb1	77	53.917	ENSMODG00000014067	USB1	99	49.117	Monodelphis_domestica
ENSAPOG00000011942	usb1	99	70.819	ENSMALG00000005930	usb1	99	71.174	Monopterus_albus
ENSAPOG00000011942	usb1	99	48.746	MGP_CAROLIEiJ_G0031421	Usb1	99	52.679	Mus_caroli
ENSAPOG00000011942	usb1	99	48.746	ENSMUSG00000031792	Usb1	99	52.679	Mus_musculus
ENSAPOG00000011942	usb1	82	52.814	MGP_PahariEiJ_G0023019	Usb1	100	54.701	Mus_pahari
ENSAPOG00000011942	usb1	99	48.746	MGP_SPRETEiJ_G0032540	Usb1	98	48.746	Mus_spretus
ENSAPOG00000011942	usb1	83	51.502	ENSMPUG00000004684	USB1	94	48.387	Mustela_putorius_furo
ENSAPOG00000011942	usb1	81	53.304	ENSMLUG00000007400	USB1	98	53.304	Myotis_lucifugus
ENSAPOG00000011942	usb1	99	49.821	ENSNGAG00000009703	Usb1	98	49.821	Nannospalax_galili
ENSAPOG00000011942	usb1	100	69.231	ENSNBRG00000008747	usb1	100	77.723	Neolamprologus_brichardi
ENSAPOG00000011942	usb1	74	52.885	ENSNLEG00000003340	USB1	96	46.694	Nomascus_leucogenys
ENSAPOG00000011942	usb1	99	48.561	ENSODEG00000016214	USB1	98	48.561	Octodon_degus
ENSAPOG00000011942	usb1	99	76.071	ENSONIG00000011063	usb1	100	76.071	Oreochromis_niloticus
ENSAPOG00000011942	usb1	80	51.556	ENSOANG00000012118	USB1	94	51.556	Ornithorhynchus_anatinus
ENSAPOG00000011942	usb1	100	71.786	ENSORLG00000012479	usb1	100	72.143	Oryzias_latipes
ENSAPOG00000011942	usb1	88	76.829	ENSORLG00020018671	usb1	100	71.429	Oryzias_latipes_hni
ENSAPOG00000011942	usb1	88	77.236	ENSORLG00015009679	usb1	100	72.143	Oryzias_latipes_hsok
ENSAPOG00000011942	usb1	99	74.552	ENSOMEG00000012930	usb1	99	74.552	Oryzias_melastigma
ENSAPOG00000011942	usb1	82	51.613	ENSOGAG00000003273	USB1	98	47.893	Otolemur_garnettii
ENSAPOG00000011942	usb1	85	50.420	ENSOARG00000001107	USB1	91	50.420	Ovis_aries
ENSAPOG00000011942	usb1	82	50.698	ENSPPAG00000042137	USB1	98	45.977	Pan_paniscus
ENSAPOG00000011942	usb1	83	49.785	ENSPPRG00000024797	USB1	98	45.878	Panthera_pardus
ENSAPOG00000011942	usb1	83	49.356	ENSPTIG00000007506	USB1	98	45.878	Panthera_tigris_altaica
ENSAPOG00000011942	usb1	79	52.632	ENSPTRG00000008172	USB1	100	52.804	Pan_troglodytes
ENSAPOG00000011942	usb1	82	51.628	ENSPANG00000025138	USB1	98	46.360	Papio_anubis
ENSAPOG00000011942	usb1	86	61.538	ENSPKIG00000015109	usb1	99	55.184	Paramormyrops_kingsleyae
ENSAPOG00000011942	usb1	80	45.575	ENSPSIG00000004305	USB1	100	45.575	Pelodiscus_sinensis
ENSAPOG00000011942	usb1	80	67.713	ENSPMGG00000017725	usb1	97	60.432	Periophthalmus_magnuspinnatus
ENSAPOG00000011942	usb1	99	49.110	ENSPEMG00000016183	Usb1	98	49.110	Peromyscus_maniculatus_bairdii
ENSAPOG00000011942	usb1	80	49.115	ENSPMAG00000000462	usb1	95	49.115	Petromyzon_marinus
ENSAPOG00000011942	usb1	100	72.183	ENSPFOG00000011130	usb1	99	72.183	Poecilia_formosa
ENSAPOG00000011942	usb1	100	71.831	ENSPLAG00000009820	usb1	99	71.831	Poecilia_latipinna
ENSAPOG00000011942	usb1	100	71.831	ENSPMEG00000006402	usb1	99	71.831	Poecilia_mexicana
ENSAPOG00000011942	usb1	88	71.888	ENSPREG00000001047	usb1	98	72.691	Poecilia_reticulata
ENSAPOG00000011942	usb1	76	48.598	ENSPPYG00000007401	USB1	98	43.233	Pongo_abelii
ENSAPOG00000011942	usb1	81	51.982	ENSPCOG00000022612	USB1	98	46.953	Propithecus_coquereli
ENSAPOG00000011942	usb1	99	46.237	ENSPVAG00000004613	USB1	98	46.237	Pteropus_vampyrus
ENSAPOG00000011942	usb1	100	73.571	ENSPNYG00000022262	usb1	100	73.571	Pundamilia_nyererei
ENSAPOG00000011942	usb1	80	66.518	ENSPNAG00000011736	usb1	100	56.803	Pygocentrus_nattereri
ENSAPOG00000011942	usb1	99	49.104	ENSRNOG00000013216	Usb1	98	49.104	Rattus_norvegicus
ENSAPOG00000011942	usb1	79	53.110	ENSRBIG00000044466	USB1	100	53.271	Rhinopithecus_bieti
ENSAPOG00000011942	usb1	81	52.423	ENSRROG00000029211	USB1	98	46.360	Rhinopithecus_roxellana
ENSAPOG00000011942	usb1	81	52.423	ENSSBOG00000029362	USB1	98	47.126	Saimiri_boliviensis_boliviensis
ENSAPOG00000011942	usb1	77	52.535	ENSSHAG00000006993	USB1	90	52.863	Sarcophilus_harrisii
ENSAPOG00000011942	usb1	89	57.934	ENSSFOG00015023663	usb1	91	56.944	Scleropages_formosus
ENSAPOG00000011942	usb1	100	68.475	ENSSMAG00000015834	usb1	100	68.814	Scophthalmus_maximus
ENSAPOG00000011942	usb1	86	74.793	ENSSDUG00000002949	usb1	100	70.000	Seriola_dumerili
ENSAPOG00000011942	usb1	100	72.143	ENSSLDG00000014174	usb1	100	72.143	Seriola_lalandi_dorsalis
ENSAPOG00000011942	usb1	76	53.271	ENSSPUG00000006741	USB1	100	53.271	Sphenodon_punctatus
ENSAPOG00000011942	usb1	99	81.272	ENSSPAG00000007484	usb1	99	81.272	Stegastes_partitus
ENSAPOG00000011942	usb1	99	48.029	ENSSSCG00000002807	USB1	98	48.746	Sus_scrofa
ENSAPOG00000011942	usb1	99	45.683	ENSTGUG00000004792	USB1	98	47.842	Taeniopygia_guttata
ENSAPOG00000011942	usb1	99	66.667	ENSTRUG00000021069	usb1	99	66.667	Takifugu_rubripes
ENSAPOG00000011942	usb1	99	58.781	ENSTNIG00000000626	usb1	98	58.781	Tetraodon_nigroviridis
ENSAPOG00000011942	usb1	80	37.054	ENSTBEG00000001507	USB1	97	37.054	Tupaia_belangeri
ENSAPOG00000011942	usb1	83	51.931	ENSUAMG00000016823	USB1	98	48.387	Ursus_americanus
ENSAPOG00000011942	usb1	76	53.738	ENSUMAG00000021369	USB1	100	53.738	Ursus_maritimus
ENSAPOG00000011942	usb1	93	46.212	ENSVVUG00000023700	USB1	93	46.212	Vulpes_vulpes
ENSAPOG00000011942	usb1	77	56.221	ENSXETG00000013795	usb1	99	50.179	Xenopus_tropicalis
ENSAPOG00000011942	usb1	91	73.256	ENSXMAG00000024687	usb1	81	71.032	Xiphophorus_maculatus