EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000011971 (Gene tree)
Gene ID: 110972025
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 12461 bases
Position: chrMVNR01003671.1:6521-18981
Accession: 110972025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000009651	RNase_T	PF00929.24	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000001196	-	351	XM_022222433	ENSAPOP00000009651	116 (aa)	XP_022078125	-

Gene Model

Click here to download ENSAPOG00000011971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000011971's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000011971	smfn	96	76.577	ENSG00000076043	REXO2	59	76.577	Homo_sapiens
ENSAPOG00000011971	smfn	97	89.286	ENSACIG00000023553	smfn	60	89.286	Amphilophus_citrinellus
ENSAPOG00000011971	smfn	100	97.414	ENSAOCG00000011565	smfn	71	97.414	Amphiprion_ocellaris
ENSAPOG00000011971	smfn	96	77.477	ENSAPLG00000005045	REXO2	55	77.477	Anas_platyrhynchos
ENSAPOG00000011971	smfn	77	60.674	ENSANAG00000027457	-	70	59.091	Aotus_nancymaae
ENSAPOG00000011971	smfn	98	87.719	ENSACLG00000024566	smfn	58	89.189	Astatotilapia_calliptera
ENSAPOG00000011971	smfn	86	53.000	WBGene00007429	C08B6.8	93	56.164	Caenorhabditis_elegans
ENSAPOG00000011971	smfn	89	73.786	ENSTSYG00000027948	-	56	73.786	Carlito_syrichta
ENSAPOG00000011971	smfn	96	77.477	ENSCAPG00000006093	REXO2	59	77.477	Cavia_aperea
ENSAPOG00000011971	smfn	96	77.477	ENSCPBG00000009359	REXO2	78	77.477	Chrysemys_picta_bellii
ENSAPOG00000011971	smfn	96	73.874	ENSCGRG00001010922	-	54	73.874	Cricetulus_griseus_chok1gshd
ENSAPOG00000011971	smfn	96	76.577	ENSCGRG00001013673	-	54	76.577	Cricetulus_griseus_chok1gshd
ENSAPOG00000011971	smfn	95	88.182	ENSCVAG00000012008	smfn	59	88.182	Cyprinodon_variegatus
ENSAPOG00000011971	smfn	95	71.818	ENSDORG00000025142	-	55	71.818	Dipodomys_ordii
ENSAPOG00000011971	smfn	96	76.577	ENSFALG00000010044	REXO2	55	76.577	Ficedula_albicollis
ENSAPOG00000011971	smfn	90	82.692	ENSGMOG00000006370	smfn	54	82.692	Gadus_morhua
ENSAPOG00000011971	smfn	94	88.073	ENSGACG00000020096	smfn	53	88.073	Gasterosteus_aculeatus
ENSAPOG00000011971	smfn	98	87.719	ENSHBUG00000020097	REXO2	55	87.719	Haplochromis_burtoni
ENSAPOG00000011971	smfn	95	82.727	ENSHCOG00000007122	smfn	59	82.727	Hippocampus_comes
ENSAPOG00000011971	smfn	98	86.842	ENSLBEG00000006021	smfn	60	86.842	Labrus_bergylta
ENSAPOG00000011971	smfn	99	81.739	ENSLOCG00000002389	smfn	55	81.739	Lepisosteus_oculatus
ENSAPOG00000011971	smfn	96	76.106	ENSMGAG00000003026	REXO2	69	76.106	Meleagris_gallopavo
ENSAPOG00000011971	smfn	96	76.577	ENSNGAG00000008819	Rexo2	54	76.577	Nannospalax_galili
ENSAPOG00000011971	smfn	98	86.842	ENSNBRG00000006529	smfn	60	86.842	Neolamprologus_brichardi
ENSAPOG00000011971	smfn	96	78.378	ENSMEUG00000011558	REXO2	51	78.378	Notamacropus_eugenii
ENSAPOG00000011971	smfn	78	73.626	ENSODEG00000016046	-	50	73.626	Octodon_degus
ENSAPOG00000011971	smfn	96	77.477	ENSODEG00000009750	-	59	77.477	Octodon_degus
ENSAPOG00000011971	smfn	96	76.577	ENSOMEG00000008940	-	78	76.577	Oryzias_melastigma
ENSAPOG00000011971	smfn	96	77.477	ENSOARG00000001040	REXO2	52	77.477	Ovis_aries
ENSAPOG00000011971	smfn	96	77.477	ENSPTIG00000015578	REXO2	59	77.477	Panthera_tigris_altaica
ENSAPOG00000011971	smfn	99	81.739	ENSPMGG00000007442	smfn	61	81.739	Periophthalmus_magnuspinnatus
ENSAPOG00000011971	smfn	85	77.778	ENSPMAG00000001022	REXO2	85	77.778	Petromyzon_marinus
ENSAPOG00000011971	smfn	99	87.826	ENSPFOG00000017861	smfn	57	87.826	Poecilia_formosa
ENSAPOG00000011971	smfn	100	78.448	ENSSFOG00015022414	smfn	62	78.448	Scleropages_formosus
ENSAPOG00000011971	smfn	99	70.435	ENSSPUG00000006005	REXO2	61	70.435	Sphenodon_punctatus
ENSAPOG00000011971	smfn	100	91.379	ENSSPAG00000001530	smfn	62	91.379	Stegastes_partitus
ENSAPOG00000011971	smfn	96	47.748	ENSVPAG00000006301	REXO2	59	47.748	Vicugna_pacos
ENSAPOG00000011971	smfn	99	86.087	ENSXCOG00000018838	smfn	59	86.087	Xiphophorus_couchianus