EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000012241 (Gene tree)
Gene ID
110952779
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Plus strand
Length
7981 bases
Position
chrMVNR01000014.1:2415261-2423241
Accession
110952779
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000009710Beta-CaspPF10996.86.9e-3411
ENSAPOP00000027524Beta-CaspPF10996.87.3e-3411
ENSAPOP00000009804Beta-CaspPF10996.87.5e-3411
ENSAPOP00000009767Beta-CaspPF10996.87.7e-0611
ENSAPOP00000009804Lactamase_BPF00753.271e-1811
ENSAPOP00000027524Lactamase_BPF00753.271.1e-1811
ENSAPOP00000009710Lactamase_BPF00753.275.1e-1511
ENSAPOP00000027489Lactamase_BPF00753.271.7e-0511
ENSAPOP00000009710RMMBLPF07521.124.1e-2111
ENSAPOP00000009804RMMBLPF07521.124.4e-2111
ENSAPOP00000027524RMMBLPF07521.124.5e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000001073CPSF3-2051587-ENSAPOP00000009710528 (aa)--
ENSAPOT00000000960CPSF3-2021677XM_022196495ENSAPOP00000027524558 (aa)XP_022052187-
ENSAPOT00000001003CPSF3-203921-ENSAPOP00000009767306 (aa)--
ENSAPOT00000001057CPSF3-204678-ENSAPOP00000027489225 (aa)--
ENSAPOT00000000933CPSF3-2011662-ENSAPOP00000009804553 (aa)--
Gene Model
Click here to download ENSAPOG00000012241's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000012241's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000012241CPSF39196.260ENSAPOG00000022087cpsf37794.222
ENSAPOG00000012241CPSF38940.574ENSAPOG00000022656ints117935.656
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000012241CPSF39096.982ENSG00000119203CPSF3100100.000Homo_sapiens
ENSAPOG00000012241CPSF39096.982ENSAMEG00000008493CPSF37396.994Ailuropoda_melanoleuca
ENSAPOG00000012241CPSF38596.896ENSACIG00000023663CPSF37196.896Amphilophus_citrinellus
ENSAPOG00000012241CPSF38594.667ENSACIG00000009846cpsf37194.667Amphilophus_citrinellus
ENSAPOG00000012241CPSF39199.804ENSAOCG00000010077CPSF37499.804Amphiprion_ocellaris
ENSAPOG00000012241CPSF39196.260ENSAOCG00000022056cpsf38196.260Amphiprion_ocellaris
ENSAPOG00000012241CPSF39199.804ENSAPEG00000021167CPSF37599.804Amphiprion_percula
ENSAPOG00000012241CPSF39196.457ENSAPEG00000019526cpsf37796.457Amphiprion_percula
ENSAPOG00000012241CPSF39199.216ENSATEG00000014525CPSF37899.216Anabas_testudineus
ENSAPOG00000012241CPSF39196.267ENSATEG00000003959cpsf37496.267Anabas_testudineus
ENSAPOG00000012241CPSF38996.368ENSAPLG00000006941CPSF37296.531Anas_platyrhynchos
ENSAPOG00000012241CPSF38696.703ENSACAG00000001759CPSF37296.703Anolis_carolinensis
ENSAPOG00000012241CPSF39092.958ENSANAG00000031254CPSF37393.648Aotus_nancymaae
ENSAPOG00000012241CPSF38897.327ENSACLG00000018846CPSF37197.118Astatotilapia_calliptera
ENSAPOG00000012241CPSF38996.581ENSACLG00000014484cpsf37397.320Astatotilapia_calliptera
ENSAPOG00000012241CPSF39198.228ENSAMXG00000004786cpsf37798.228Astyanax_mexicanus
ENSAPOG00000012241CPSF39096.982ENSBTAG00000019735CPSF37396.994Bos_taurus
ENSAPOG00000012241CPSF39861.792WBGene00013460cpsf-37761.792Caenorhabditis_elegans
ENSAPOG00000012241CPSF39096.982ENSCJAG00000006276CPSF37396.994Callithrix_jacchus
ENSAPOG00000012241CPSF39096.982ENSCAFG00000003375CPSF37096.994Canis_familiaris
ENSAPOG00000012241CPSF39096.982ENSCAFG00020026799CPSF38295.850Canis_lupus_dingo
ENSAPOG00000012241CPSF39096.982ENSCHIG00000013973CPSF37396.994Capra_hircus
ENSAPOG00000012241CPSF39096.982ENSTSYG00000002967CPSF37396.994Carlito_syrichta
ENSAPOG00000012241CPSF38996.154ENSCAPG00000013851CPSF37396.907Cavia_aperea
ENSAPOG00000012241CPSF39096.781ENSCPOG00000011299CPSF37396.794Cavia_porcellus
ENSAPOG00000012241CPSF39096.982ENSCCAG00000036730CPSF37396.994Cebus_capucinus
ENSAPOG00000012241CPSF39096.982ENSCATG00000014770CPSF39495.208Cercocebus_atys
ENSAPOG00000012241CPSF39096.781ENSCLAG00000002727CPSF37396.794Chinchilla_lanigera
ENSAPOG00000012241CPSF39185.375ENSCSAG00000007125CPSF37285.375Chlorocebus_sabaeus
ENSAPOG00000012241CPSF374100.000ENSCHOG00000000180CPSF35873.711Choloepus_hoffmanni
ENSAPOG00000012241CPSF39096.982ENSCPBG00000014074CPSF37495.874Chrysemys_picta_bellii
ENSAPOG00000012241CPSF39078.313ENSCING00000007214-7278.313Ciona_intestinalis
ENSAPOG00000012241CPSF39088.531ENSCANG00000034435CPSF37388.577Colobus_angolensis_palliatus
ENSAPOG00000012241CPSF39096.579ENSCGRG00001013134Cpsf37396.593Cricetulus_griseus_chok1gshd
ENSAPOG00000012241CPSF39096.579ENSCGRG00000018319Cpsf37396.593Cricetulus_griseus_crigri
ENSAPOG00000012241CPSF39197.835ENSCSEG00000002021CPSF37497.835Cynoglossus_semilaevis
ENSAPOG00000012241CPSF39297.674ENSCVAG00000015067CPSF37597.674Cyprinodon_variegatus
ENSAPOG00000012241CPSF39198.035ENSDARG00000027649cpsf37498.035Danio_rerio
ENSAPOG00000012241CPSF39095.382ENSDNOG00000008940CPSF37095.400Dasypus_novemcinctus
ENSAPOG00000012241CPSF39096.982ENSDORG00000014263Cpsf37796.994Dipodomys_ordii
ENSAPOG00000012241CPSF39276.265FBgn0261065Cpsf737576.265Drosophila_melanogaster
ENSAPOG00000012241CPSF38884.335ENSETEG00000003893CPSF37880.237Echinops_telfairi
ENSAPOG00000012241CPSF39386.667ENSEBUG00000009018cpsf37486.667Eptatretus_burgeri
ENSAPOG00000012241CPSF39096.982ENSEASG00005003970CPSF37396.994Equus_asinus_asinus
ENSAPOG00000012241CPSF39096.982ENSECAG00000019911CPSF38196.994Equus_caballus
ENSAPOG00000012241CPSF39076.660ENSEEUG00000015422CPSF37376.754Erinaceus_europaeus
ENSAPOG00000012241CPSF39197.250ENSELUG00000013775cpsf37497.250Esox_lucius
ENSAPOG00000012241CPSF39096.982ENSFCAG00000007852CPSF37396.994Felis_catus
ENSAPOG00000012241CPSF38896.781ENSFALG00000006572CPSF37296.989Ficedula_albicollis
ENSAPOG00000012241CPSF39096.579ENSFDAG00000006317CPSF37296.593Fukomys_damarensis
ENSAPOG00000012241CPSF310088.710ENSFHEG00000014774cpsf38488.710Fundulus_heteroclitus
ENSAPOG00000012241CPSF39196.857ENSGMOG00000003157cpsf37496.857Gadus_morhua
ENSAPOG00000012241CPSF39196.245ENSGALG00000016424CPSF37396.245Gallus_gallus
ENSAPOG00000012241CPSF39297.481ENSGAFG00000008016CPSF37597.481Gambusia_affinis
ENSAPOG00000012241CPSF38692.779ENSGAFG00000019449cpsf37392.779Gambusia_affinis
ENSAPOG00000012241CPSF35595.502ENSGAGG00000025583CPSF35795.819Gopherus_agassizii
ENSAPOG00000012241CPSF39093.750ENSGGOG00000001757CPSF39198.065Gorilla_gorilla
ENSAPOG00000012241CPSF39196.660ENSHBUG00000001188cpsf37496.660Haplochromis_burtoni
ENSAPOG00000012241CPSF39096.579ENSHGLG00000000666CPSF37296.593Heterocephalus_glaber_female
ENSAPOG00000012241CPSF39096.579ENSHGLG00100007765CPSF37296.593Heterocephalus_glaber_male
ENSAPOG00000012241CPSF39297.674ENSHCOG00000015957CPSF37497.674Hippocampus_comes
ENSAPOG00000012241CPSF39196.457ENSHCOG00000007251cpsf37496.457Hippocampus_comes
ENSAPOG00000012241CPSF39295.736ENSIPUG00000023488cpsf37595.736Ictalurus_punctatus
ENSAPOG00000012241CPSF39096.982ENSSTOG00000004476CPSF37396.994Ictidomys_tridecemlineatus
ENSAPOG00000012241CPSF39096.378ENSJJAG00000023415Cpsf37396.393Jaculus_jaculus
ENSAPOG00000012241CPSF39195.661ENSKMAG00000002806cpsf37495.661Kryptolebias_marmoratus
ENSAPOG00000012241CPSF39298.256ENSKMAG00000007317CPSF37598.256Kryptolebias_marmoratus
ENSAPOG00000012241CPSF39297.868ENSLBEG00000013492CPSF37897.868Labrus_bergylta
ENSAPOG00000012241CPSF39191.356ENSLBEG00000020569cpsf37491.356Labrus_bergylta
ENSAPOG00000012241CPSF39188.802ENSLACG00000008308CPSF37488.802Latimeria_chalumnae
ENSAPOG00000012241CPSF39296.318ENSLOCG00000016823cpsf37496.318Lepisosteus_oculatus
ENSAPOG00000012241CPSF39095.181ENSLAFG00000009467CPSF37395.181Loxodonta_africana
ENSAPOG00000012241CPSF39096.982ENSMFAG00000001339CPSF39495.208Macaca_fascicularis
ENSAPOG00000012241CPSF39096.982ENSMMUG00000018038CPSF39295.208Macaca_mulatta
ENSAPOG00000012241CPSF37998.374ENSMNEG00000039447CPSF37098.374Macaca_nemestrina
ENSAPOG00000012241CPSF39096.982ENSMLEG00000026825CPSF39297.854Mandrillus_leucophaeus
ENSAPOG00000012241CPSF39196.071ENSMAMG00000003076cpsf37794.222Mastacembelus_armatus
ENSAPOG00000012241CPSF38597.339ENSMAMG00000008835CPSF37197.339Mastacembelus_armatus
ENSAPOG00000012241CPSF39196.660ENSMZEG00005014358cpsf37496.660Maylandia_zebra
ENSAPOG00000012241CPSF39198.821ENSMZEG00005006258CPSF37498.821Maylandia_zebra
ENSAPOG00000012241CPSF38996.368ENSMGAG00000013995CPSF37397.113Meleagris_gallopavo
ENSAPOG00000012241CPSF39093.964ENSMICG00000002363CPSF37593.988Microcebus_murinus
ENSAPOG00000012241CPSF39096.579ENSMOCG00000020067Cpsf37796.593Microtus_ochrogaster
ENSAPOG00000012241CPSF38896.137ENSMMOG00000018212CPSF37496.146Mola_mola
ENSAPOG00000012241CPSF36591.667ENSMMOG00000011923CPSF35591.667Mola_mola
ENSAPOG00000012241CPSF39096.982ENSMODG00000014703CPSF37296.994Monodelphis_domestica
ENSAPOG00000012241CPSF39196.267ENSMALG00000016416cpsf37496.267Monopterus_albus
ENSAPOG00000012241CPSF38696.739ENSMALG00000011474CPSF37596.739Monopterus_albus
ENSAPOG00000012241CPSF38996.593MGP_CAROLIEiJ_G0017640Cpsf37396.593Mus_caroli
ENSAPOG00000012241CPSF38996.593ENSMUSG00000054309Cpsf39698.305Mus_musculus
ENSAPOG00000012241CPSF38996.593MGP_PahariEiJ_G0029397Cpsf37396.593Mus_pahari
ENSAPOG00000012241CPSF38996.593MGP_SPRETEiJ_G0018481Cpsf37396.593Mus_spretus
ENSAPOG00000012241CPSF39096.982ENSMPUG00000013213CPSF37396.994Mustela_putorius_furo
ENSAPOG00000012241CPSF39096.982ENSMLUG00000010636CPSF37396.994Myotis_lucifugus
ENSAPOG00000012241CPSF39096.579ENSNGAG00000019836Cpsf37396.593Nannospalax_galili
ENSAPOG00000012241CPSF39196.267ENSNBRG00000004770cpsf37496.267Neolamprologus_brichardi
ENSAPOG00000012241CPSF38897.327ENSNBRG00000010525CPSF37197.118Neolamprologus_brichardi
ENSAPOG00000012241CPSF39096.982ENSNLEG00000013359CPSF39198.065Nomascus_leucogenys
ENSAPOG00000012241CPSF354100.000ENSMEUG00000013117-7359.118Notamacropus_eugenii
ENSAPOG00000012241CPSF39085.111ENSOPRG00000008902CPSF37385.170Ochotona_princeps
ENSAPOG00000012241CPSF39096.982ENSODEG00000003129CPSF37396.994Octodon_degus
ENSAPOG00000012241CPSF39196.464ENSONIG00000018812cpsf37496.464Oreochromis_niloticus
ENSAPOG00000012241CPSF37396.094ENSOANG00000008577CPSF36896.335Ornithorhynchus_anatinus
ENSAPOG00000012241CPSF39096.982ENSOCUG00000003728CPSF37396.994Oryctolagus_cuniculus
ENSAPOG00000012241CPSF39196.055ENSORLG00000018854cpsf37496.055Oryzias_latipes
ENSAPOG00000012241CPSF39196.055ENSORLG00020013331cpsf37496.055Oryzias_latipes_hni
ENSAPOG00000012241CPSF39196.055ENSORLG00015011017cpsf37496.055Oryzias_latipes_hsok
ENSAPOG00000012241CPSF39196.252ENSOMEG00000010647cpsf37196.252Oryzias_melastigma
ENSAPOG00000012241CPSF39083.300ENSOGAG00000001680CPSF37383.367Otolemur_garnettii
ENSAPOG00000012241CPSF39096.982ENSOARG00000015073CPSF37396.994Ovis_aries
ENSAPOG00000012241CPSF39096.982ENSPPAG00000042457CPSF39198.065Pan_paniscus
ENSAPOG00000012241CPSF39096.982ENSPPRG00000016790CPSF37396.994Panthera_pardus
ENSAPOG00000012241CPSF39096.982ENSPTIG00000003920CPSF37397.189Panthera_tigris_altaica
ENSAPOG00000012241CPSF39096.982ENSPTRG00000011638CPSF39198.065Pan_troglodytes
ENSAPOG00000012241CPSF39096.982ENSPANG00000016798CPSF39495.208Papio_anubis
ENSAPOG00000012241CPSF39197.839ENSPKIG00000023646cpsf37497.839Paramormyrops_kingsleyae
ENSAPOG00000012241CPSF39095.783ENSPSIG00000016144CPSF37395.783Pelodiscus_sinensis
ENSAPOG00000012241CPSF38594.444ENSPMGG00000006141-7894.444Periophthalmus_magnuspinnatus
ENSAPOG00000012241CPSF39096.579ENSPEMG00000017668Cpsf37396.593Peromyscus_maniculatus_bairdii
ENSAPOG00000012241CPSF39389.205ENSPMAG00000004841cpsf39789.205Petromyzon_marinus
ENSAPOG00000012241CPSF38996.368ENSPCIG00000009823CPSF37397.113Phascolarctos_cinereus
ENSAPOG00000012241CPSF39297.093ENSPFOG00000010418-7597.093Poecilia_formosa
ENSAPOG00000012241CPSF39294.747ENSPFOG00000015922cpsf37594.747Poecilia_formosa
ENSAPOG00000012241CPSF39294.747ENSPLAG00000000882cpsf37594.747Poecilia_latipinna
ENSAPOG00000012241CPSF39294.942ENSPMEG00000018309cpsf37594.942Poecilia_mexicana
ENSAPOG00000012241CPSF38692.779ENSPREG00000014875cpsf37392.779Poecilia_reticulata
ENSAPOG00000012241CPSF39198.625ENSPREG00000004482CPSF37898.625Poecilia_reticulata
ENSAPOG00000012241CPSF39091.348ENSPPYG00000012666CPSF37291.383Pongo_abelii
ENSAPOG00000012241CPSF38173.536ENSPCAG00000015042CPSF37170.779Procavia_capensis
ENSAPOG00000012241CPSF39276.955ENSPCOG00000023016CPSF37290.545Propithecus_coquereli
ENSAPOG00000012241CPSF39096.982ENSPVAG00000005324CPSF37396.994Pteropus_vampyrus
ENSAPOG00000012241CPSF38996.053ENSPNYG00000021047CPSF37597.118Pundamilia_nyererei
ENSAPOG00000012241CPSF39196.660ENSPNYG00000004405cpsf37496.660Pundamilia_nyererei
ENSAPOG00000012241CPSF39198.232ENSPNAG00000023060cpsf37498.232Pygocentrus_nattereri
ENSAPOG00000012241CPSF38996.593ENSRNOG00000052418Cpsf37396.593Rattus_norvegicus
ENSAPOG00000012241CPSF38297.696ENSRBIG00000041615CPSF36898.140Rhinopithecus_bieti
ENSAPOG00000012241CPSF39096.982ENSRROG00000033792CPSF37396.994Rhinopithecus_roxellana
ENSAPOG00000012241CPSF38946.939YLR277CYSH16152.110Saccharomyces_cerevisiae
ENSAPOG00000012241CPSF38298.226ENSSBOG00000027263CPSF36698.226Saimiri_boliviensis_boliviensis
ENSAPOG00000012241CPSF39096.982ENSSHAG00000007024CPSF37396.994Sarcophilus_harrisii
ENSAPOG00000012241CPSF39197.446ENSSFOG00015002108cpsf37497.446Scleropages_formosus
ENSAPOG00000012241CPSF39297.868ENSSMAG00000020534CPSF37797.868Scophthalmus_maximus
ENSAPOG00000012241CPSF39195.874ENSSDUG00000002828cpsf37295.874Seriola_dumerili
ENSAPOG00000012241CPSF39298.256ENSSDUG00000018498CPSF37598.256Seriola_dumerili
ENSAPOG00000012241CPSF39298.256ENSSLDG00000005234CPSF37598.256Seriola_lalandi_dorsalis
ENSAPOG00000012241CPSF39196.063ENSSLDG00000008469cpsf37996.063Seriola_lalandi_dorsalis
ENSAPOG00000012241CPSF39084.909ENSSARG00000005186CPSF37384.970Sorex_araneus
ENSAPOG00000012241CPSF38794.683ENSSPUG00000015525CPSF37194.683Sphenodon_punctatus
ENSAPOG00000012241CPSF39199.607ENSSPAG00000002906CPSF37499.607Stegastes_partitus
ENSAPOG00000012241CPSF39196.260ENSSPAG00000018579cpsf37496.260Stegastes_partitus
ENSAPOG00000012241CPSF39096.982ENSSSCG00000020799CPSF37396.994Sus_scrofa
ENSAPOG00000012241CPSF39096.982ENSTGUG00000013016CPSF37396.982Taeniopygia_guttata
ENSAPOG00000012241CPSF39196.450ENSTRUG00000007030cpsf37396.450Takifugu_rubripes
ENSAPOG00000012241CPSF37292.179ENSTBEG00000002707CPSF36192.179Tupaia_belangeri
ENSAPOG00000012241CPSF36891.228ENSTTRG00000000861CPSF36074.939Tursiops_truncatus
ENSAPOG00000012241CPSF39096.982ENSUAMG00000007535CPSF37296.994Ursus_americanus
ENSAPOG00000012241CPSF38896.781ENSUMAG00000003676CPSF37996.788Ursus_maritimus
ENSAPOG00000012241CPSF38996.368ENSVPAG00000008041CPSF37796.920Vicugna_pacos
ENSAPOG00000012241CPSF39096.982ENSVVUG00000002194CPSF37396.994Vulpes_vulpes
ENSAPOG00000012241CPSF39393.858ENSXETG00000008263cpsf37593.858Xenopus_tropicalis
ENSAPOG00000012241CPSF39195.678ENSXCOG00000019695cpsf37595.678Xiphophorus_couchianus
ENSAPOG00000012241CPSF39297.481ENSXMAG00000027291CPSF37597.481Xiphophorus_maculatus
ENSAPOG00000012241CPSF39195.678ENSXMAG00000009784cpsf37495.678Xiphophorus_maculatus

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