EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000012341 (Gene tree)
Gene ID: 110952734
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 11424 bases
Position: chrMVNR01000258.1:548454-559877
Accession: 110952734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000027636	KH_1	PF00013.29	4.4e-06	1	1
ENSAPOP00000027636	zf-CCHC	PF00098.23	0.00053	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000000692	-	3200	XM_022196432	ENSAPOP00000027636	678 (aa)	XP_022052124	UPI000B901115

Gene Model

Click here to download ENSAPOG00000012341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000012341's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000012341	sf1	67	87.033	ENSACIG00000016514	sf1	69	86.250	Amphilophus_citrinellus
ENSAPOG00000012341	sf1	100	98.968	ENSAOCG00000010934	sf1	100	98.968	Amphiprion_ocellaris
ENSAPOG00000012341	sf1	100	98.968	ENSAPEG00000009498	sf1	100	98.968	Amphiprion_percula
ENSAPOG00000012341	sf1	67	92.105	ENSATEG00000001894	sf1	97	93.646	Anabas_testudineus
ENSAPOG00000012341	sf1	61	76.690	ENSANAG00000026664	-	90	80.928	Aotus_nancymaae
ENSAPOG00000012341	sf1	84	65.738	ENSANAG00000022607	-	88	73.190	Aotus_nancymaae
ENSAPOG00000012341	sf1	67	90.769	ENSACLG00000007633	sf1	73	89.770	Astatotilapia_calliptera
ENSAPOG00000012341	sf1	69	85.201	ENSAMXG00000003630	sf1	62	84.937	Astyanax_mexicanus
ENSAPOG00000012341	sf1	60	75.581	ENSBTAG00000001035	SF1	63	80.928	Bos_taurus
ENSAPOG00000012341	sf1	60	75.814	ENSCJAG00000002780	SF1	75	68.593	Callithrix_jacchus
ENSAPOG00000012341	sf1	60	75.814	ENSCAFG00000014239	SF1	59	80.670	Canis_familiaris
ENSAPOG00000012341	sf1	60	75.814	ENSCAFG00020014381	SF1	59	80.670	Canis_lupus_dingo
ENSAPOG00000012341	sf1	60	75.814	ENSCHIG00000025867	SF1	69	80.670	Capra_hircus
ENSAPOG00000012341	sf1	58	76.794	ENSCAPG00000010762	SF1	65	81.818	Cavia_aperea
ENSAPOG00000012341	sf1	59	76.596	ENSCPOG00000012290	SF1	68	81.551	Cavia_porcellus
ENSAPOG00000012341	sf1	61	75.991	ENSCCAG00000037881	SF1	90	80.928	Cebus_capucinus
ENSAPOG00000012341	sf1	59	71.533	ENSCCAG00000023781	-	74	77.101	Cebus_capucinus
ENSAPOG00000012341	sf1	57	79.146	ENSCATG00000011564	SF1	90	80.928	Cercocebus_atys
ENSAPOG00000012341	sf1	60	75.814	ENSCSAG00000007258	SF1	69	80.670	Chlorocebus_sabaeus
ENSAPOG00000012341	sf1	56	71.571	ENSCHOG00000006008	SF1	66	76.323	Choloepus_hoffmanni
ENSAPOG00000012341	sf1	62	81.628	ENSCPBG00000023763	SF1	50	83.756	Chrysemys_picta_bellii
ENSAPOG00000012341	sf1	60	56.398	ENSCING00000005564	-	87	56.109	Ciona_intestinalis
ENSAPOG00000012341	sf1	61	53.147	ENSCSAVG00000009055	-	64	65.074	Ciona_savignyi
ENSAPOG00000012341	sf1	56	80.307	ENSCANG00000042201	SF1	91	80.928	Colobus_angolensis_palliatus
ENSAPOG00000012341	sf1	60	76.047	ENSCGRG00001003677	Sf1	66	80.928	Cricetulus_griseus_chok1gshd
ENSAPOG00000012341	sf1	60	76.471	ENSCGRG00000001708	Sf1	69	81.201	Cricetulus_griseus_crigri
ENSAPOG00000012341	sf1	97	90.045	ENSCSEG00000014375	sf1	94	90.015	Cynoglossus_semilaevis
ENSAPOG00000012341	sf1	98	89.744	ENSCVAG00000001670	sf1	97	89.697	Cyprinodon_variegatus
ENSAPOG00000012341	sf1	86	82.069	ENSDARG00000008188	sf1	69	89.474	Danio_rerio
ENSAPOG00000012341	sf1	60	77.049	ENSDNOG00000001282	SF1	69	80.928	Dasypus_novemcinctus
ENSAPOG00000012341	sf1	60	75.814	ENSDORG00000016334	Sf1	59	80.670	Dipodomys_ordii
ENSAPOG00000012341	sf1	60	76.047	ENSEASG00005018272	SF1	69	80.928	Equus_asinus_asinus
ENSAPOG00000012341	sf1	60	76.047	ENSECAG00000024544	SF1	69	80.928	Equus_caballus
ENSAPOG00000012341	sf1	53	77.005	ENSEEUG00000001058	SF1	83	82.635	Erinaceus_europaeus
ENSAPOG00000012341	sf1	77	78.439	ENSELUG00000013225	sf1	64	82.209	Esox_lucius
ENSAPOG00000012341	sf1	60	75.814	ENSFCAG00000012231	SF1	75	68.932	Felis_catus
ENSAPOG00000012341	sf1	58	77.966	ENSFDAG00000009833	SF1	65	82.353	Fukomys_damarensis
ENSAPOG00000012341	sf1	97	88.636	ENSFHEG00000022656	sf1	97	88.333	Fundulus_heteroclitus
ENSAPOG00000012341	sf1	86	70.103	ENSGMOG00000007469	sf1	62	92.105	Gadus_morhua
ENSAPOG00000012341	sf1	89	88.962	ENSGAFG00000019284	sf1	77	89.308	Gambusia_affinis
ENSAPOG00000012341	sf1	62	81.395	ENSGAGG00000021691	SF1	71	70.736	Gopherus_agassizii
ENSAPOG00000012341	sf1	67	92.544	ENSHBUG00000011598	sf1	97	93.363	Haplochromis_burtoni
ENSAPOG00000012341	sf1	60	75.814	ENSHGLG00000009541	SF1	66	80.928	Heterocephalus_glaber_female
ENSAPOG00000012341	sf1	61	65.996	ENSHGLG00100008255	-	74	71.649	Heterocephalus_glaber_male
ENSAPOG00000012341	sf1	58	76.923	ENSHGLG00100013879	-	65	82.353	Heterocephalus_glaber_male
ENSAPOG00000012341	sf1	69	87.660	ENSHCOG00000011388	sf1	97	87.424	Hippocampus_comes
ENSAPOG00000012341	sf1	55	70.909	ENSSTOG00000024353	-	68	70.543	Ictidomys_tridecemlineatus
ENSAPOG00000012341	sf1	58	76.923	ENSSTOG00000009790	-	58	82.086	Ictidomys_tridecemlineatus
ENSAPOG00000012341	sf1	60	76.047	ENSJJAG00000011788	Sf1	59	80.928	Jaculus_jaculus
ENSAPOG00000012341	sf1	84	91.228	ENSKMAG00000005854	sf1	91	91.092	Kryptolebias_marmoratus
ENSAPOG00000012341	sf1	97	78.765	ENSLBEG00000019836	sf1	75	89.605	Labrus_bergylta
ENSAPOG00000012341	sf1	60	77.482	ENSLACG00000018493	SF1	68	79.255	Latimeria_chalumnae
ENSAPOG00000012341	sf1	67	79.789	ENSLOCG00000002130	sf1	76	78.842	Lepisosteus_oculatus
ENSAPOG00000012341	sf1	59	79.376	ENSLAFG00000007201	SF1	63	83.733	Loxodonta_africana
ENSAPOG00000012341	sf1	57	79.146	ENSMFAG00000033122	SF1	90	80.928	Macaca_fascicularis
ENSAPOG00000012341	sf1	54	81.963	ENSMMUG00000022606	SF1	90	81.794	Macaca_mulatta
ENSAPOG00000012341	sf1	57	79.146	ENSMNEG00000037901	SF1	90	80.928	Macaca_nemestrina
ENSAPOG00000012341	sf1	57	79.494	ENSMLEG00000040706	SF1	90	81.299	Mandrillus_leucophaeus
ENSAPOG00000012341	sf1	100	95.294	ENSMAMG00000001780	sf1	100	95.294	Mastacembelus_armatus
ENSAPOG00000012341	sf1	67	92.544	ENSMZEG00005009196	sf1	97	93.363	Maylandia_zebra
ENSAPOG00000012341	sf1	60	76.047	ENSMAUG00000014064	Sf1	66	80.928	Mesocricetus_auratus
ENSAPOG00000012341	sf1	61	75.581	ENSMICG00000001202	SF1	90	80.720	Microcebus_murinus
ENSAPOG00000012341	sf1	60	76.047	ENSMOCG00000022038	Sf1	66	80.928	Microtus_ochrogaster
ENSAPOG00000012341	sf1	86	87.629	ENSMMOG00000020474	sf1	87	89.304	Mola_mola
ENSAPOG00000012341	sf1	59	77.566	ENSMODG00000029407	SF1	80	81.530	Monodelphis_domestica
ENSAPOG00000012341	sf1	84	86.268	ENSMALG00000020521	sf1	92	88.556	Monopterus_albus
ENSAPOG00000012341	sf1	60	76.047	MGP_CAROLIEiJ_G0022607	Sf1	99	94.737	Mus_caroli
ENSAPOG00000012341	sf1	60	76.047	ENSMUSG00000024949	Sf1	99	94.737	Mus_musculus
ENSAPOG00000012341	sf1	60	76.815	MGP_PahariEiJ_G0014101	Sf1	99	94.737	Mus_pahari
ENSAPOG00000012341	sf1	60	76.047	MGP_SPRETEiJ_G0023518	Sf1	99	94.737	Mus_spretus
ENSAPOG00000012341	sf1	60	76.347	ENSMPUG00000012684	SF1	58	82.058	Mustela_putorius_furo
ENSAPOG00000012341	sf1	59	77.273	ENSMLUG00000015217	-	58	82.322	Myotis_lucifugus
ENSAPOG00000012341	sf1	64	74.222	ENSMLUG00000029800	-	65	77.320	Myotis_lucifugus
ENSAPOG00000012341	sf1	60	76.047	ENSNGAG00000005550	Sf1	66	81.186	Nannospalax_galili
ENSAPOG00000012341	sf1	56	80.307	ENSNLEG00000005236	-	91	80.928	Nomascus_leucogenys
ENSAPOG00000012341	sf1	58	78.537	ENSMEUG00000013424	SF1	68	82.480	Notamacropus_eugenii
ENSAPOG00000012341	sf1	53	77.748	ENSOPRG00000005008	SF1	66	82.335	Ochotona_princeps
ENSAPOG00000012341	sf1	67	92.325	ENSONIG00000015728	sf1	97	92.911	Oreochromis_niloticus
ENSAPOG00000012341	sf1	59	76.722	ENSOCUG00000026486	SF1	59	81.266	Oryctolagus_cuniculus
ENSAPOG00000012341	sf1	69	87.234	ENSORLG00000011853	sf1	69	86.345	Oryzias_latipes
ENSAPOG00000012341	sf1	69	87.660	ENSORLG00020011834	sf1	69	86.765	Oryzias_latipes_hni
ENSAPOG00000012341	sf1	68	87.555	ENSORLG00015012855	sf1	69	86.555	Oryzias_latipes_hsok
ENSAPOG00000012341	sf1	97	89.378	ENSOMEG00000005210	sf1	97	88.619	Oryzias_melastigma
ENSAPOG00000012341	sf1	60	75.814	ENSOGAG00000016196	SF1	59	80.670	Otolemur_garnettii
ENSAPOG00000012341	sf1	60	75.814	ENSOARG00000009166	SF1	66	80.670	Ovis_aries
ENSAPOG00000012341	sf1	59	78.125	ENSPPAG00000002799	-	90	82.058	Pan_paniscus
ENSAPOG00000012341	sf1	59	76.722	ENSPPRG00000013566	SF1	57	83.102	Panthera_pardus
ENSAPOG00000012341	sf1	59	77.751	ENSPTIG00000016141	SF1	66	82.058	Panthera_tigris_altaica
ENSAPOG00000012341	sf1	62	76.027	ENSPTRG00000003846	SF1	91	80.928	Pan_troglodytes
ENSAPOG00000012341	sf1	57	79.146	ENSPANG00000020754	SF1	90	80.928	Papio_anubis
ENSAPOG00000012341	sf1	60	76.047	ENSPEMG00000010463	Sf1	66	80.928	Peromyscus_maniculatus_bairdii
ENSAPOG00000012341	sf1	60	74.828	ENSPCIG00000018173	SF1	61	80.463	Phascolarctos_cinereus
ENSAPOG00000012341	sf1	97	89.242	ENSPFOG00000013683	sf1	97	90.152	Poecilia_formosa
ENSAPOG00000012341	sf1	90	88.762	ENSPLAG00000018076	sf1	93	89.577	Poecilia_latipinna
ENSAPOG00000012341	sf1	97	89.242	ENSPMEG00000005726	sf1	97	90.152	Poecilia_mexicana
ENSAPOG00000012341	sf1	97	89.545	ENSPREG00000004155	sf1	97	89.545	Poecilia_reticulata
ENSAPOG00000012341	sf1	60	75.814	ENSPPYG00000003098	-	71	80.670	Pongo_abelii
ENSAPOG00000012341	sf1	61	75.346	ENSPCAG00000013631	SF1	75	68.421	Procavia_capensis
ENSAPOG00000012341	sf1	61	75.581	ENSPCOG00000027546	SF1	90	80.720	Propithecus_coquereli
ENSAPOG00000012341	sf1	61	76.402	ENSPVAG00000016938	SF1	75	70.000	Pteropus_vampyrus
ENSAPOG00000012341	sf1	67	92.763	ENSPNYG00000004673	sf1	97	92.760	Pundamilia_nyererei
ENSAPOG00000012341	sf1	67	83.261	ENSPNAG00000013072	sf1	70	84.310	Pygocentrus_nattereri
ENSAPOG00000012341	sf1	60	75.814	ENSRNOG00000021085	Sf1	60	81.290	Rattus_norvegicus
ENSAPOG00000012341	sf1	56	80.307	ENSRBIG00000042818	SF1	91	80.670	Rhinopithecus_bieti
ENSAPOG00000012341	sf1	56	80.670	ENSRROG00000045655	SF1	91	81.299	Rhinopithecus_roxellana
ENSAPOG00000012341	sf1	86	62.761	ENSSBOG00000022267	-	90	65.985	Saimiri_boliviensis_boliviensis
ENSAPOG00000012341	sf1	72	71.053	ENSSHAG00000006841	SF1	70	82.984	Sarcophilus_harrisii
ENSAPOG00000012341	sf1	71	80.619	ENSSFOG00015021978	sf1	69	80.331	Scleropages_formosus
ENSAPOG00000012341	sf1	84	89.501	ENSSMAG00000007549	sf1	75	88.957	Scophthalmus_maximus
ENSAPOG00000012341	sf1	67	94.311	ENSSDUG00000003903	sf1	73	94.990	Seriola_dumerili
ENSAPOG00000012341	sf1	58	72.356	ENSSARG00000008180	SF1	71	77.273	Sorex_araneus
ENSAPOG00000012341	sf1	59	79.720	ENSSPUG00000012907	SF1	58	86.441	Sphenodon_punctatus
ENSAPOG00000012341	sf1	100	96.755	ENSSPAG00000019060	sf1	100	96.755	Stegastes_partitus
ENSAPOG00000012341	sf1	60	77.049	ENSSSCG00000013021	SF1	69	80.928	Sus_scrofa
ENSAPOG00000012341	sf1	73	70.446	ENSTNIG00000004820	sf1	77	73.747	Tetraodon_nigroviridis
ENSAPOG00000012341	sf1	58	71.875	ENSTTRG00000008857	SF1	67	76.203	Tursiops_truncatus
ENSAPOG00000012341	sf1	60	78.487	ENSUMAG00000007268	SF1	71	80.670	Ursus_maritimus
ENSAPOG00000012341	sf1	60	75.814	ENSVVUG00000028585	SF1	69	80.670	Vulpes_vulpes
ENSAPOG00000012341	sf1	85	72.959	ENSXETG00000008434	sf1	62	86.264	Xenopus_tropicalis
ENSAPOG00000012341	sf1	54	93.699	ENSXCOG00000003704	sf1	73	91.451	Xiphophorus_couchianus
ENSAPOG00000012341	sf1	97	90.606	ENSXMAG00000007822	sf1	97	90.455	Xiphophorus_maculatus