EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000012353 (Gene tree)
Gene ID: 110952735
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 7008 bases
Position: chrMVNR01000258.1:541426-548433
Accession: 110952735
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000009982	zf-CCHC	PF00098.23	5.8e-08	1	1
ENSAPOP00000009982	RRM_5	PF13893.6	1.1e-07	1	1
ENSAPOP00000009982	RRM_1	PF00076.22	3.3e-31	1	2
ENSAPOP00000009982	RRM_1	PF00076.22	3.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000000607	-	4950	XM_022196433	ENSAPOP00000009982	420 (aa)	XP_022052125	UPI000B905BF1

Gene Model

Click here to download ENSAPOG00000012353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000012353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000012353	rbm4.1	100	56.000	ENSAPOG00000002953	rbm4.3	100	39.954
ENSAPOG00000012353	rbm4.1	71	52.247	ENSAPOG00000002991	rbm4.3	99	52.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000012353	rbm4.1	100	91.449	ENSACIG00000016482	rbm4.1	100	91.449	Amphilophus_citrinellus
ENSAPOG00000012353	rbm4.1	100	98.095	ENSAOCG00000010915	rbm4.1	100	98.095	Amphiprion_ocellaris
ENSAPOG00000012353	rbm4.1	100	98.095	ENSAPEG00000009494	rbm4.1	100	98.095	Amphiprion_percula
ENSAPOG00000012353	rbm4.1	100	91.686	ENSATEG00000001904	rbm4.1	100	91.686	Anabas_testudineus
ENSAPOG00000012353	rbm4.1	100	90.736	ENSACLG00000007722	rbm4.1	100	90.736	Astatotilapia_calliptera
ENSAPOG00000012353	rbm4.1	95	46.750	ENSACLG00000007740	-	94	45.209	Astatotilapia_calliptera
ENSAPOG00000012353	rbm4.1	100	62.796	ENSAMXG00000036611	rbm4.1	100	63.593	Astyanax_mexicanus
ENSAPOG00000012353	rbm4.1	97	49.645	ENSCSEG00000014359	-	98	49.415	Cynoglossus_semilaevis
ENSAPOG00000012353	rbm4.1	100	75.714	ENSCSEG00000014365	rbm4.1	100	75.714	Cynoglossus_semilaevis
ENSAPOG00000012353	rbm4.1	100	80.285	ENSCVAG00000019349	rbm4.1	100	80.285	Cyprinodon_variegatus
ENSAPOG00000012353	rbm4.1	100	51.765	ENSDARG00000055080	rbm4.2	100	51.529	Danio_rerio
ENSAPOG00000012353	rbm4.1	100	69.811	ENSDARG00000036386	rbm4.1	100	69.811	Danio_rerio
ENSAPOG00000012353	rbm4.1	100	65.904	ENSELUG00000013205	rbm4.1	100	68.471	Esox_lucius
ENSAPOG00000012353	rbm4.1	100	79.669	ENSFHEG00000022926	rbm4.1	100	79.196	Fundulus_heteroclitus
ENSAPOG00000012353	rbm4.1	100	68.706	ENSGMOG00000007464	rbm4.1	100	70.188	Gadus_morhua
ENSAPOG00000012353	rbm4.1	92	51.269	ENSGMOG00000007455	-	92	51.500	Gadus_morhua
ENSAPOG00000012353	rbm4.1	100	78.960	ENSGAFG00000019302	rbm4.1	100	78.251	Gambusia_affinis
ENSAPOG00000012353	rbm4.1	96	48.293	ENSGACG00000000821	-	96	47.031	Gasterosteus_aculeatus
ENSAPOG00000012353	rbm4.1	99	92.188	ENSGACG00000000822	rbm4.1	100	79.059	Gasterosteus_aculeatus
ENSAPOG00000012353	rbm4.1	100	90.736	ENSHBUG00000011610	rbm4.1	100	90.736	Haplochromis_burtoni
ENSAPOG00000012353	rbm4.1	96	69.533	ENSHCOG00000011403	rbm4.1	98	71.072	Hippocampus_comes
ENSAPOG00000012353	rbm4.1	100	51.168	ENSIPUG00000022937	rbm4.2	100	50.698	Ictalurus_punctatus
ENSAPOG00000012353	rbm4.1	100	64.840	ENSIPUG00000022931	rbm4.1	100	65.604	Ictalurus_punctatus
ENSAPOG00000012353	rbm4.1	100	80.569	ENSKMAG00000006556	rbm4.1	100	80.569	Kryptolebias_marmoratus
ENSAPOG00000012353	rbm4.1	95	49.377	ENSLBEG00000019756	-	90	60.256	Labrus_bergylta
ENSAPOG00000012353	rbm4.1	100	85.986	ENSLBEG00000019782	rbm4.1	100	85.986	Labrus_bergylta
ENSAPOG00000012353	rbm4.1	100	90.974	ENSMAMG00000001765	rbm4.1	100	90.974	Mastacembelus_armatus
ENSAPOG00000012353	rbm4.1	95	50.728	ENSMAMG00000001760	-	95	49.038	Mastacembelus_armatus
ENSAPOG00000012353	rbm4.1	100	90.736	ENSMZEG00005009205	rbm4.1	100	90.736	Maylandia_zebra
ENSAPOG00000012353	rbm4.1	100	86.525	ENSMMOG00000020479	rbm4.1	100	86.525	Mola_mola
ENSAPOG00000012353	rbm4.1	95	52.357	ENSMALG00000020557	-	94	50.365	Monopterus_albus
ENSAPOG00000012353	rbm4.1	100	88.836	ENSMALG00000020544	rbm4.1	100	88.836	Monopterus_albus
ENSAPOG00000012353	rbm4.1	100	90.974	ENSNBRG00000017755	rbm4.1	100	90.974	Neolamprologus_brichardi
ENSAPOG00000012353	rbm4.1	100	90.736	ENSONIG00000015730	rbm4.1	100	90.736	Oreochromis_niloticus
ENSAPOG00000012353	rbm4.1	100	79.048	ENSORLG00000012496	rbm4.1	100	79.572	Oryzias_latipes
ENSAPOG00000012353	rbm4.1	100	79.048	ENSORLG00020012454	rbm4.1	100	79.572	Oryzias_latipes_hni
ENSAPOG00000012353	rbm4.1	100	79.621	ENSORLG00015013678	rbm4.1	100	79.810	Oryzias_latipes_hsok
ENSAPOG00000012353	rbm4.1	100	80.285	ENSOMEG00000001001	rbm4.1	100	80.285	Oryzias_melastigma
ENSAPOG00000012353	rbm4.1	100	64.252	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSAPOG00000012353	rbm4.1	100	79.196	ENSPFOG00000012675	rbm4.1	100	78.487	Poecilia_formosa
ENSAPOG00000012353	rbm4.1	99	46.043	ENSPFOG00000012685	-	99	45.863	Poecilia_formosa
ENSAPOG00000012353	rbm4.1	100	79.196	ENSPLAG00000018572	rbm4.1	100	78.487	Poecilia_latipinna
ENSAPOG00000012353	rbm4.1	100	79.196	ENSPMEG00000006290	rbm4.1	100	78.487	Poecilia_mexicana
ENSAPOG00000012353	rbm4.1	99	44.365	ENSPREG00000003764	-	92	61.881	Poecilia_reticulata
ENSAPOG00000012353	rbm4.1	100	79.196	ENSPREG00000003724	rbm4.1	100	78.487	Poecilia_reticulata
ENSAPOG00000012353	rbm4.1	100	90.736	ENSPNYG00000004662	rbm4.1	100	90.736	Pundamilia_nyererei
ENSAPOG00000012353	rbm4.1	100	67.925	ENSPNAG00000002539	rbm4.1	100	69.484	Pygocentrus_nattereri
ENSAPOG00000012353	rbm4.1	100	51.508	ENSPNAG00000013057	rbm4.2	100	51.508	Pygocentrus_nattereri
ENSAPOG00000012353	rbm4.1	100	64.252	ENSSFOG00015021996	sf1	100	64.252	Scleropages_formosus
ENSAPOG00000012353	rbm4.1	100	85.476	ENSSMAG00000007571	rbm4.1	100	83.571	Scophthalmus_maximus
ENSAPOG00000012353	rbm4.1	100	92.637	ENSSDUG00000003925	rbm4.1	100	92.637	Seriola_dumerili
ENSAPOG00000012353	rbm4.1	95	52.555	ENSSDUG00000003936	-	97	51.190	Seriola_dumerili
ENSAPOG00000012353	rbm4.1	100	92.637	ENSSLDG00000013147	rbm4.1	100	92.637	Seriola_lalandi_dorsalis
ENSAPOG00000012353	rbm4.1	95	49.755	ENSSLDG00000013157	-	97	50.718	Seriola_lalandi_dorsalis
ENSAPOG00000012353	rbm4.1	99	48.095	ENSSPAG00000019046	-	95	47.942	Stegastes_partitus
ENSAPOG00000012353	rbm4.1	100	94.550	ENSSPAG00000019053	rbm4.1	100	95.498	Stegastes_partitus
ENSAPOG00000012353	rbm4.1	99	47.733	ENSTRUG00000013328	-	99	46.948	Takifugu_rubripes
ENSAPOG00000012353	rbm4.1	100	79.524	ENSTRUG00000013334	rbm4.1	100	78.571	Takifugu_rubripes
ENSAPOG00000012353	rbm4.1	96	45.742	ENSTNIG00000000316	-	96	47.722	Tetraodon_nigroviridis
ENSAPOG00000012353	rbm4.1	79	89.216	ENSTNIG00000004821	rbm4.1	100	56.190	Tetraodon_nigroviridis
ENSAPOG00000012353	rbm4.1	100	79.196	ENSXCOG00000003731	rbm4.1	100	78.487	Xiphophorus_couchianus
ENSAPOG00000012353	rbm4.1	100	78.960	ENSXMAG00000008069	rbm4.1	100	78.251	Xiphophorus_maculatus
ENSAPOG00000012353	rbm4.1	99	46.523	ENSXMAG00000008059	-	94	69.939	Xiphophorus_maculatus