EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000012375 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 2833 bases
Position: chrMVNR01000258.1:537178-540010
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000009997	RRM_5	PF13893.6	2.9e-08	1	1
ENSAPOP00000009997	RRM_1	PF00076.22	8.7e-32	1	2
ENSAPOP00000009997	RRM_1	PF00076.22	8.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000000594	-	441	-	ENSAPOP00000009997	146 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000012375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000012375's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000012375	-	53	30.864	ENSAPOG00000018179	-	50	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000012375	-	97	91.549	ENSACIG00000016472	-	87	91.549	Amphilophus_citrinellus
ENSAPOG00000012375	-	100	98.630	ENSAOCG00000010907	-	100	98.630	Amphiprion_ocellaris
ENSAPOG00000012375	-	97	98.582	ENSAPEG00000009476	-	88	98.582	Amphiprion_percula
ENSAPOG00000012375	-	95	89.051	ENSATEG00000001912	-	90	89.051	Anabas_testudineus
ENSAPOG00000012375	-	97	59.286	ENSAMXG00000032121	rbm4.2	88	59.286	Astyanax_mexicanus
ENSAPOG00000012375	-	95	52.174	ENSCPBG00000023666	-	92	52.174	Chrysemys_picta_bellii
ENSAPOG00000012375	-	97	64.029	ENSCSEG00000007739	-	99	64.029	Cynoglossus_semilaevis
ENSAPOG00000012375	-	97	67.376	ENSDARG00000036386	rbm4.1	79	68.116	Danio_rerio
ENSAPOG00000012375	-	96	57.143	ENSEBUG00000007174	-	88	57.143	Eptatretus_burgeri
ENSAPOG00000012375	-	97	79.577	ENSFHEG00000003483	-	93	79.577	Fundulus_heteroclitus
ENSAPOG00000012375	-	97	75.352	ENSGAFG00000019301	-	93	75.352	Gambusia_affinis
ENSAPOG00000012375	-	95	52.174	ENSGAGG00000014558	-	92	52.174	Gopherus_agassizii
ENSAPOG00000012375	-	95	89.209	ENSHBUG00000011624	-	91	89.209	Haplochromis_burtoni
ENSAPOG00000012375	-	96	81.429	ENSHCOG00000011413	-	82	81.429	Hippocampus_comes
ENSAPOG00000012375	-	97	85.106	ENSLBEG00000019756	-	86	83.916	Labrus_bergylta
ENSAPOG00000012375	-	97	52.482	ENSLACG00000006343	zgc:77262	52	53.237	Latimeria_chalumnae
ENSAPOG00000012375	-	97	63.043	ENSLOCG00000002772	rbm4.1	99	63.043	Lepisosteus_oculatus
ENSAPOG00000012375	-	98	86.713	ENSMZEG00005028160	-	97	86.713	Maylandia_zebra
ENSAPOG00000012375	-	98	54.545	ENSMZEG00005028161	-	79	54.545	Maylandia_zebra
ENSAPOG00000012375	-	99	79.310	ENSMZEG00005009210	-	81	79.310	Maylandia_zebra
ENSAPOG00000012375	-	95	81.884	ENSMMOG00000020484	-	86	81.884	Mola_mola
ENSAPOG00000012375	-	95	88.489	ENSNBRG00000017763	-	90	88.489	Neolamprologus_brichardi
ENSAPOG00000012375	-	97	67.391	ENSPKIG00000020805	rbm4.1	85	67.391	Paramormyrops_kingsleyae
ENSAPOG00000012375	-	96	66.429	ENSPMGG00000004331	rbm4.1	93	66.429	Periophthalmus_magnuspinnatus
ENSAPOG00000012375	-	96	55.000	ENSPMAG00000003433	rbm4.2	70	55.000	Petromyzon_marinus
ENSAPOG00000012375	-	95	76.812	ENSPLAG00000018569	-	88	76.812	Poecilia_latipinna
ENSAPOG00000012375	-	95	76.812	ENSPMEG00000006278	-	88	76.812	Poecilia_mexicana
ENSAPOG00000012375	-	95	89.209	ENSPNYG00000004649	-	90	89.209	Pundamilia_nyererei
ENSAPOG00000012375	-	95	53.731	ENSSFOG00015018567	zgc:77262	89	53.731	Scleropages_formosus
ENSAPOG00000012375	-	97	89.437	ENSSMAG00000007575	-	91	89.437	Scophthalmus_maximus
ENSAPOG00000012375	-	97	76.056	ENSXCOG00000003730	-	88	76.056	Xiphophorus_couchianus