EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000012452 (Gene tree)
Gene ID: 110965682
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 8521 bases
Position: chrMVNR01001458.1:161349-169869
Accession: 110965682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000027673	RNA_pol_I_A49	PF06870.12	3.8e-102	1	2
ENSAPOP00000027673	RNA_pol_I_A49	PF06870.12	3.8e-102	2	2
ENSAPOP00000010002	RNA_pol_I_A49	PF06870.12	1.4e-82	1	3
ENSAPOP00000010002	RNA_pol_I_A49	PF06870.12	1.4e-82	2	3
ENSAPOP00000010002	RNA_pol_I_A49	PF06870.12	1.4e-82	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000000619	-	1170	XM_022214804	ENSAPOP00000027673	389 (aa)	XP_022070496	-
ENSAPOT00000000589	-	1068	-	ENSAPOP00000010002	355 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000012452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000012452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000012452	polr1e	99	42.754	ENSG00000137054	POLR1E	98	42.754	Homo_sapiens
ENSAPOG00000012452	polr1e	99	39.610	ENSAMEG00000010193	POLR1E	95	39.610	Ailuropoda_melanoleuca
ENSAPOG00000012452	polr1e	96	68.548	ENSACIG00000009884	polr1e	99	69.054	Amphilophus_citrinellus
ENSAPOG00000012452	polr1e	100	89.663	ENSAOCG00000005665	polr1e	100	89.663	Amphiprion_ocellaris
ENSAPOG00000012452	polr1e	100	90.144	ENSAPEG00000020581	polr1e	100	90.144	Amphiprion_percula
ENSAPOG00000012452	polr1e	100	73.558	ENSATEG00000020609	polr1e	100	73.558	Anabas_testudineus
ENSAPOG00000012452	polr1e	78	67.857	ENSAPLG00000010340	POLR1E	80	63.333	Anas_platyrhynchos
ENSAPOG00000012452	polr1e	99	44.444	ENSANAG00000038046	POLR1E	98	44.444	Aotus_nancymaae
ENSAPOG00000012452	polr1e	100	73.077	ENSACLG00000013685	polr1e	99	73.077	Astatotilapia_calliptera
ENSAPOG00000012452	polr1e	99	57.246	ENSAMXG00000018181	polr1e	99	57.246	Astyanax_mexicanus
ENSAPOG00000012452	polr1e	99	43.237	ENSBTAG00000012243	POLR1E	98	43.237	Bos_taurus
ENSAPOG00000012452	polr1e	95	46.966	ENSCJAG00000010512	POLR1E	93	45.430	Callithrix_jacchus
ENSAPOG00000012452	polr1e	99	42.271	ENSCAFG00000002377	POLR1E	98	42.271	Canis_familiaris
ENSAPOG00000012452	polr1e	99	42.271	ENSCAFG00020017851	POLR1E	98	42.271	Canis_lupus_dingo
ENSAPOG00000012452	polr1e	99	43.237	ENSCHIG00000019479	POLR1E	98	43.237	Capra_hircus
ENSAPOG00000012452	polr1e	99	43.750	ENSTSYG00000002075	POLR1E	98	43.237	Carlito_syrichta
ENSAPOG00000012452	polr1e	68	39.175	ENSCAPG00000015653	POLR1E	99	39.175	Cavia_aperea
ENSAPOG00000012452	polr1e	99	42.995	ENSCPOG00000009965	POLR1E	98	42.995	Cavia_porcellus
ENSAPOG00000012452	polr1e	99	39.709	ENSCCAG00000029460	POLR1E	98	39.709	Cebus_capucinus
ENSAPOG00000012452	polr1e	99	50.893	ENSCATG00000031732	POLR1E	98	56.731	Cercocebus_atys
ENSAPOG00000012452	polr1e	86	45.028	ENSCLAG00000012701	POLR1E	95	45.028	Chinchilla_lanigera
ENSAPOG00000012452	polr1e	99	42.995	ENSCSAG00000010782	POLR1E	98	42.995	Chlorocebus_sabaeus
ENSAPOG00000012452	polr1e	98	35.437	ENSCHOG00000013024	POLR1E	84	35.437	Choloepus_hoffmanni
ENSAPOG00000012452	polr1e	99	43.914	ENSCPBG00000006923	POLR1E	99	43.914	Chrysemys_picta_bellii
ENSAPOG00000012452	polr1e	98	51.852	ENSCANG00000036112	POLR1E	99	51.852	Colobus_angolensis_palliatus
ENSAPOG00000012452	polr1e	94	61.176	ENSCGRG00001006197	Polr1e	76	61.176	Cricetulus_griseus_chok1gshd
ENSAPOG00000012452	polr1e	94	58.824	ENSCGRG00000006430	Polr1e	95	40.723	Cricetulus_griseus_crigri
ENSAPOG00000012452	polr1e	99	67.568	ENSCSEG00000005121	polr1e	99	67.568	Cynoglossus_semilaevis
ENSAPOG00000012452	polr1e	100	68.029	ENSCVAG00000019759	polr1e	100	68.029	Cyprinodon_variegatus
ENSAPOG00000012452	polr1e	97	54.187	ENSDARG00000006434	polr1e	100	54.306	Danio_rerio
ENSAPOG00000012452	polr1e	96	60.227	ENSDNOG00000010257	POLR1E	79	60.227	Dasypus_novemcinctus
ENSAPOG00000012452	polr1e	75	41.379	ENSETEG00000018204	POLR1E	89	41.693	Echinops_telfairi
ENSAPOG00000012452	polr1e	78	31.494	ENSEBUG00000010635	-	95	31.310	Eptatretus_burgeri
ENSAPOG00000012452	polr1e	99	42.548	ENSEASG00005000675	POLR1E	98	42.548	Equus_asinus_asinus
ENSAPOG00000012452	polr1e	99	42.548	ENSECAG00000014669	POLR1E	98	42.548	Equus_caballus
ENSAPOG00000012452	polr1e	99	36.386	ENSEEUG00000011928	POLR1E	86	36.386	Erinaceus_europaeus
ENSAPOG00000012452	polr1e	99	61.928	ENSELUG00000008150	polr1e	99	61.928	Esox_lucius
ENSAPOG00000012452	polr1e	99	43.133	ENSFCAG00000013081	POLR1E	98	43.133	Felis_catus
ENSAPOG00000012452	polr1e	95	43.672	ENSFALG00000012950	POLR1E	99	43.672	Ficedula_albicollis
ENSAPOG00000012452	polr1e	99	45.084	ENSFDAG00000016917	POLR1E	98	45.084	Fukomys_damarensis
ENSAPOG00000012452	polr1e	100	68.585	ENSFHEG00000009801	polr1e	100	68.585	Fundulus_heteroclitus
ENSAPOG00000012452	polr1e	99	51.790	ENSGMOG00000003336	POLR1E	99	51.790	Gadus_morhua
ENSAPOG00000012452	polr1e	99	42.417	ENSGALG00000005395	POLR1E	99	42.417	Gallus_gallus
ENSAPOG00000012452	polr1e	100	68.750	ENSGAFG00000004850	polr1e	100	68.750	Gambusia_affinis
ENSAPOG00000012452	polr1e	100	65.632	ENSGACG00000016087	polr1e	100	65.632	Gasterosteus_aculeatus
ENSAPOG00000012452	polr1e	97	40.098	ENSGAGG00000001659	POLR1E	99	39.857	Gopherus_agassizii
ENSAPOG00000012452	polr1e	99	42.686	ENSGGOG00000001882	POLR1E	99	42.686	Gorilla_gorilla
ENSAPOG00000012452	polr1e	100	73.077	ENSHBUG00000002559	polr1e	99	73.077	Haplochromis_burtoni
ENSAPOG00000012452	polr1e	99	44.952	ENSHGLG00000002036	POLR1E	98	44.952	Heterocephalus_glaber_female
ENSAPOG00000012452	polr1e	99	45.192	ENSHGLG00100012784	POLR1E	98	45.192	Heterocephalus_glaber_male
ENSAPOG00000012452	polr1e	100	67.067	ENSHCOG00000002774	polr1e	100	67.067	Hippocampus_comes
ENSAPOG00000012452	polr1e	99	54.699	ENSIPUG00000003019	polr1e	99	54.699	Ictalurus_punctatus
ENSAPOG00000012452	polr1e	99	43.269	ENSSTOG00000009810	POLR1E	99	43.269	Ictidomys_tridecemlineatus
ENSAPOG00000012452	polr1e	99	42.512	ENSJJAG00000020731	Polr1e	95	42.512	Jaculus_jaculus
ENSAPOG00000012452	polr1e	100	69.231	ENSKMAG00000000046	polr1e	100	69.231	Kryptolebias_marmoratus
ENSAPOG00000012452	polr1e	99	72.048	ENSLBEG00000003104	polr1e	99	72.048	Labrus_bergylta
ENSAPOG00000012452	polr1e	85	47.107	ENSLACG00000003416	POLR1E	99	47.107	Latimeria_chalumnae
ENSAPOG00000012452	polr1e	99	51.079	ENSLOCG00000012859	polr1e	99	51.079	Lepisosteus_oculatus
ENSAPOG00000012452	polr1e	96	61.176	ENSLAFG00000012831	POLR1E	98	43.373	Loxodonta_africana
ENSAPOG00000012452	polr1e	99	50.893	ENSMFAG00000045465	POLR1E	99	50.893	Macaca_fascicularis
ENSAPOG00000012452	polr1e	99	50.893	ENSMMUG00000017892	POLR1E	99	50.893	Macaca_mulatta
ENSAPOG00000012452	polr1e	99	39.437	ENSMNEG00000040283	POLR1E	92	48.315	Macaca_nemestrina
ENSAPOG00000012452	polr1e	99	50.893	ENSMLEG00000031135	POLR1E	99	50.893	Mandrillus_leucophaeus
ENSAPOG00000012452	polr1e	99	69.639	ENSMAMG00000001260	polr1e	99	69.639	Mastacembelus_armatus
ENSAPOG00000012452	polr1e	100	73.077	ENSMZEG00005021536	polr1e	99	73.077	Maylandia_zebra
ENSAPOG00000012452	polr1e	99	41.546	ENSMAUG00000021044	Polr1e	95	41.546	Mesocricetus_auratus
ENSAPOG00000012452	polr1e	99	43.720	ENSMICG00000003673	POLR1E	98	43.720	Microcebus_murinus
ENSAPOG00000012452	polr1e	99	41.205	ENSMOCG00000012920	Polr1e	95	41.205	Microtus_ochrogaster
ENSAPOG00000012452	polr1e	100	70.024	ENSMMOG00000007391	polr1e	100	70.024	Mola_mola
ENSAPOG00000012452	polr1e	96	44.279	ENSMODG00000002884	POLR1E	98	44.279	Monodelphis_domestica
ENSAPOG00000012452	polr1e	100	72.115	ENSMALG00000002665	polr1e	99	72.115	Monopterus_albus
ENSAPOG00000012452	polr1e	94	56.471	MGP_CAROLIEiJ_G0025967	Polr1e	98	40.452	Mus_caroli
ENSAPOG00000012452	polr1e	94	58.824	ENSMUSG00000028318	Polr1e	97	40.351	Mus_musculus
ENSAPOG00000012452	polr1e	94	60.000	MGP_PahariEiJ_G0024114	Polr1e	98	41.855	Mus_pahari
ENSAPOG00000012452	polr1e	94	58.824	MGP_SPRETEiJ_G0026930	Polr1e	98	41.542	Mus_spretus
ENSAPOG00000012452	polr1e	96	63.529	ENSMPUG00000006040	POLR1E	83	63.529	Mustela_putorius_furo
ENSAPOG00000012452	polr1e	99	43.961	ENSMLUG00000012688	POLR1E	95	43.961	Myotis_lucifugus
ENSAPOG00000012452	polr1e	98	42.336	ENSNGAG00000002520	Polr1e	94	42.336	Nannospalax_galili
ENSAPOG00000012452	polr1e	100	73.077	ENSNBRG00000016822	polr1e	99	73.077	Neolamprologus_brichardi
ENSAPOG00000012452	polr1e	99	42.995	ENSNLEG00000003616	POLR1E	98	50.000	Nomascus_leucogenys
ENSAPOG00000012452	polr1e	78	52.000	ENSMEUG00000015372	-	80	52.000	Notamacropus_eugenii
ENSAPOG00000012452	polr1e	85	37.222	ENSOPRG00000014206	POLR1E	99	37.222	Ochotona_princeps
ENSAPOG00000012452	polr1e	97	44.608	ENSODEG00000014565	POLR1E	94	44.608	Octodon_degus
ENSAPOG00000012452	polr1e	100	73.317	ENSONIG00000008921	polr1e	99	73.317	Oreochromis_niloticus
ENSAPOG00000012452	polr1e	99	42.512	ENSOCUG00000024773	POLR1E	98	42.512	Oryctolagus_cuniculus
ENSAPOG00000012452	polr1e	100	67.308	ENSORLG00000005143	polr1e	100	67.308	Oryzias_latipes
ENSAPOG00000012452	polr1e	96	61.126	ENSORLG00020007271	polr1e	99	64.767	Oryzias_latipes_hni
ENSAPOG00000012452	polr1e	100	67.308	ENSORLG00015000137	polr1e	100	67.308	Oryzias_latipes_hsok
ENSAPOG00000012452	polr1e	100	66.587	ENSOMEG00000013264	polr1e	98	66.587	Oryzias_melastigma
ENSAPOG00000012452	polr1e	99	43.237	ENSOGAG00000012981	POLR1E	96	43.237	Otolemur_garnettii
ENSAPOG00000012452	polr1e	99	43.478	ENSOARG00000011465	POLR1E	95	43.478	Ovis_aries
ENSAPOG00000012452	polr1e	99	42.754	ENSPPAG00000034566	POLR1E	98	42.754	Pan_paniscus
ENSAPOG00000012452	polr1e	99	42.892	ENSPPRG00000005649	POLR1E	98	42.892	Panthera_pardus
ENSAPOG00000012452	polr1e	99	42.892	ENSPTIG00000009774	POLR1E	98	42.892	Panthera_tigris_altaica
ENSAPOG00000012452	polr1e	99	42.754	ENSPTRG00000020944	POLR1E	98	42.754	Pan_troglodytes
ENSAPOG00000012452	polr1e	99	50.893	ENSPANG00000025563	POLR1E	99	50.893	Papio_anubis
ENSAPOG00000012452	polr1e	99	54.415	ENSPKIG00000003562	polr1e	99	54.415	Paramormyrops_kingsleyae
ENSAPOG00000012452	polr1e	98	42.476	ENSPSIG00000003274	POLR1E	95	42.476	Pelodiscus_sinensis
ENSAPOG00000012452	polr1e	95	61.111	ENSPMGG00000024169	polr1e	96	61.111	Periophthalmus_magnuspinnatus
ENSAPOG00000012452	polr1e	99	36.340	ENSPEMG00000022300	-	94	36.340	Peromyscus_maniculatus_bairdii
ENSAPOG00000012452	polr1e	99	42.512	ENSPEMG00000019151	-	95	42.512	Peromyscus_maniculatus_bairdii
ENSAPOG00000012452	polr1e	99	44.203	ENSPCIG00000014798	POLR1E	99	44.203	Phascolarctos_cinereus
ENSAPOG00000012452	polr1e	100	64.626	ENSPFOG00000019627	polr1e	99	64.626	Poecilia_formosa
ENSAPOG00000012452	polr1e	100	68.750	ENSPLAG00000022679	polr1e	100	68.750	Poecilia_latipinna
ENSAPOG00000012452	polr1e	86	68.889	ENSPMEG00000022123	polr1e	93	68.889	Poecilia_mexicana
ENSAPOG00000012452	polr1e	100	67.067	ENSPREG00000009470	polr1e	100	67.067	Poecilia_reticulata
ENSAPOG00000012452	polr1e	99	42.271	ENSPPYG00000019061	POLR1E	98	42.271	Pongo_abelii
ENSAPOG00000012452	polr1e	55	34.978	ENSPCAG00000004891	POLR1E	73	35.426	Procavia_capensis
ENSAPOG00000012452	polr1e	99	43.990	ENSPCOG00000027448	POLR1E	98	43.990	Propithecus_coquereli
ENSAPOG00000012452	polr1e	96	42.893	ENSPVAG00000007940	POLR1E	84	42.893	Pteropus_vampyrus
ENSAPOG00000012452	polr1e	100	73.317	ENSPNYG00000001032	polr1e	99	73.317	Pundamilia_nyererei
ENSAPOG00000012452	polr1e	99	55.181	ENSPNAG00000006987	polr1e	99	55.181	Pygocentrus_nattereri
ENSAPOG00000012452	polr1e	99	41.063	ENSRNOG00000012664	Polr1e	95	41.063	Rattus_norvegicus
ENSAPOG00000012452	polr1e	95	43.467	ENSRBIG00000034214	POLR1E	99	44.094	Rhinopithecus_bieti
ENSAPOG00000012452	polr1e	96	60.674	ENSRROG00000031986	POLR1E	98	56.731	Rhinopithecus_roxellana
ENSAPOG00000012452	polr1e	98	43.796	ENSSBOG00000021415	POLR1E	97	43.796	Saimiri_boliviensis_boliviensis
ENSAPOG00000012452	polr1e	81	43.931	ENSSHAG00000016084	POLR1E	95	43.931	Sarcophilus_harrisii
ENSAPOG00000012452	polr1e	99	53.477	ENSSFOG00015002293	polr1e	99	53.477	Scleropages_formosus
ENSAPOG00000012452	polr1e	99	73.735	ENSSMAG00000011672	polr1e	93	73.735	Scophthalmus_maximus
ENSAPOG00000012452	polr1e	100	73.798	ENSSDUG00000022279	polr1e	99	73.798	Seriola_dumerili
ENSAPOG00000012452	polr1e	100	74.038	ENSSLDG00000024918	polr1e	99	74.038	Seriola_lalandi_dorsalis
ENSAPOG00000012452	polr1e	52	35.776	ENSSARG00000009810	-	58	35.776	Sorex_araneus
ENSAPOG00000012452	polr1e	95	42.569	ENSSPUG00000009499	POLR1E	95	42.569	Sphenodon_punctatus
ENSAPOG00000012452	polr1e	100	83.654	ENSSPAG00000021240	polr1e	100	83.654	Stegastes_partitus
ENSAPOG00000012452	polr1e	99	42.029	ENSSSCG00000005347	POLR1E	98	42.029	Sus_scrofa
ENSAPOG00000012452	polr1e	94	57.647	ENSTGUG00000007169	POLR1E	81	57.647	Taeniopygia_guttata
ENSAPOG00000012452	polr1e	99	67.703	ENSTRUG00000020779	polr1e	99	67.703	Takifugu_rubripes
ENSAPOG00000012452	polr1e	99	67.788	ENSTNIG00000017812	polr1e	99	67.788	Tetraodon_nigroviridis
ENSAPOG00000012452	polr1e	94	44.221	ENSTBEG00000013786	POLR1E	84	44.221	Tupaia_belangeri
ENSAPOG00000012452	polr1e	99	40.952	ENSTTRG00000008294	POLR1E	85	41.646	Tursiops_truncatus
ENSAPOG00000012452	polr1e	99	43.750	ENSUAMG00000012474	POLR1E	98	45.455	Ursus_americanus
ENSAPOG00000012452	polr1e	99	43.750	ENSUMAG00000011496	POLR1E	98	43.750	Ursus_maritimus
ENSAPOG00000012452	polr1e	81	39.359	ENSVPAG00000009048	POLR1E	81	39.359	Vicugna_pacos
ENSAPOG00000012452	polr1e	98	42.336	ENSVVUG00000019954	POLR1E	97	42.336	Vulpes_vulpes
ENSAPOG00000012452	polr1e	99	39.573	ENSXETG00000006533	polr1e	99	39.573	Xenopus_tropicalis
ENSAPOG00000012452	polr1e	100	63.702	ENSXCOG00000013706	polr1e	100	63.702	Xiphophorus_couchianus
ENSAPOG00000012452	polr1e	100	69.471	ENSXMAG00000012484	polr1e	100	69.471	Xiphophorus_maculatus