EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000012552 (Gene tree)
Gene ID: 110966265
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: mRNA decay activator protein ZFP36L2-B-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 855 bases
Position: chrMVNR01001570.1:74266-75120
Accession: 110966265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000010145	zf-CCCH	PF00642.24	1.4e-30	1	4
ENSAPOP00000010145	zf-CCCH	PF00642.24	1.4e-30	2	4
ENSAPOP00000010145	zf-CCCH	PF00642.24	1.4e-30	3	4
ENSAPOP00000010145	zf-CCCH	PF00642.24	1.4e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000000336	-	855	XM_022215581	ENSAPOP00000010145	285 (aa)	XP_022071273	-

Gene Model

Click here to download ENSAPOG00000012552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000012552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000012552	cth1	83	64.754	ENSACIG00000016026	cth1	89	64.311	Amphilophus_citrinellus
ENSAPOG00000012552	cth1	95	87.004	ENSAOCG00000001644	cth1	89	87.365	Amphiprion_ocellaris
ENSAPOG00000012552	cth1	95	87.004	ENSAPEG00000008930	cth1	89	87.365	Amphiprion_percula
ENSAPOG00000012552	cth1	95	73.220	ENSATEG00000002281	cth1	87	70.508	Anabas_testudineus
ENSAPOG00000012552	cth1	95	66.300	ENSACLG00000015353	cth1	95	66.176	Astatotilapia_calliptera
ENSAPOG00000012552	cth1	99	56.169	ENSAMXG00000025717	cth1	91	56.122	Astyanax_mexicanus
ENSAPOG00000012552	cth1	95	66.667	ENSCSEG00000014617	cth1	90	64.236	Cynoglossus_semilaevis
ENSAPOG00000012552	cth1	95	61.765	ENSCVAG00000001680	cth1	58	62.271	Cyprinodon_variegatus
ENSAPOG00000012552	cth1	95	56.164	ENSDARG00000057328	cth1	89	56.164	Danio_rerio
ENSAPOG00000012552	cth1	99	55.836	ENSELUG00000012738	cth1	88	53.974	Esox_lucius
ENSAPOG00000012552	cth1	94	65.950	ENSFHEG00000022665	cth1	89	65.591	Fundulus_heteroclitus
ENSAPOG00000012552	cth1	95	63.309	ENSGMOG00000007360	cth1	88	62.590	Gadus_morhua
ENSAPOG00000012552	cth1	99	62.626	ENSGAFG00000019288	cth1	90	59.507	Gambusia_affinis
ENSAPOG00000012552	cth1	99	69.550	ENSGACG00000000802	cth1	88	67.391	Gasterosteus_aculeatus
ENSAPOG00000012552	cth1	95	66.300	ENSHBUG00000014400	cth1	89	66.176	Haplochromis_burtoni
ENSAPOG00000012552	cth1	95	52.941	ENSHCOG00000010276	cth1	88	51.103	Hippocampus_comes
ENSAPOG00000012552	cth1	98	56.863	ENSIPUG00000018040	cth1	90	55.479	Ictalurus_punctatus
ENSAPOG00000012552	cth1	95	65.328	ENSKMAG00000005944	cth1	89	65.328	Kryptolebias_marmoratus
ENSAPOG00000012552	cth1	95	73.239	ENSLBEG00000019253	cth1	90	71.478	Labrus_bergylta
ENSAPOG00000012552	cth1	73	51.429	ENSLOCG00000002047	cth1	97	51.196	Lepisosteus_oculatus
ENSAPOG00000012552	cth1	75	70.320	ENSMAMG00000001525	cth1	58	71.364	Mastacembelus_armatus
ENSAPOG00000012552	cth1	95	66.300	ENSMZEG00005022335	cth1	89	66.176	Maylandia_zebra
ENSAPOG00000012552	cth1	90	69.091	ENSMMOG00000020518	cth1	90	68.727	Mola_mola
ENSAPOG00000012552	cth1	95	58.944	ENSMALG00000020738	cth1	57	72.603	Monopterus_albus
ENSAPOG00000012552	cth1	84	63.598	ENSNBRG00000022789	cth1	77	63.598	Neolamprologus_brichardi
ENSAPOG00000012552	cth1	95	65.704	ENSONIG00000021318	cth1	89	65.343	Oreochromis_niloticus
ENSAPOG00000012552	cth1	100	58.621	ENSORLG00000022847	cth1	89	59.206	Oryzias_latipes
ENSAPOG00000012552	cth1	100	58.621	ENSORLG00020011979	cth1	89	59.206	Oryzias_latipes_hni
ENSAPOG00000012552	cth1	100	58.621	ENSORLG00015013084	cth1	89	59.206	Oryzias_latipes_hsok
ENSAPOG00000012552	cth1	97	60.432	ENSOMEG00000005809	cth1	74	60.300	Oryzias_melastigma
ENSAPOG00000012552	cth1	99	51.125	ENSPKIG00000015883	cth1	87	51.351	Paramormyrops_kingsleyae
ENSAPOG00000012552	cth1	95	69.360	ENSPMGG00000004275	cth1	91	67.687	Periophthalmus_magnuspinnatus
ENSAPOG00000012552	cth1	99	66.667	ENSPFOG00000013583	cth1	84	64.260	Poecilia_formosa
ENSAPOG00000012552	cth1	99	66.323	ENSPLAG00000018158	cth1	84	63.899	Poecilia_latipinna
ENSAPOG00000012552	cth1	99	66.667	ENSPMEG00000005744	cth1	89	64.260	Poecilia_mexicana
ENSAPOG00000012552	cth1	99	65.292	ENSPREG00000004099	cth1	89	63.538	Poecilia_reticulata
ENSAPOG00000012552	cth1	89	64.173	ENSPNYG00000016705	cth1	85	64.032	Pundamilia_nyererei
ENSAPOG00000012552	cth1	88	60.219	ENSPNAG00000013147	cth1	80	58.077	Pygocentrus_nattereri
ENSAPOG00000012552	cth1	94	53.287	ENSSFOG00015017190	cth1	65	61.836	Scleropages_formosus
ENSAPOG00000012552	cth1	95	71.626	ENSSMAG00000007977	cth1	90	71.280	Scophthalmus_maximus
ENSAPOG00000012552	cth1	95	71.525	ENSSDUG00000004321	cth1	90	71.525	Seriola_dumerili
ENSAPOG00000012552	cth1	95	71.959	ENSSLDG00000004516	-	90	71.477	Seriola_lalandi_dorsalis
ENSAPOG00000012552	cth1	95	71.959	ENSSLDG00000012760	cth1	90	71.141	Seriola_lalandi_dorsalis
ENSAPOG00000012552	cth1	95	71.959	ENSSLDG00000010023	-	90	71.477	Seriola_lalandi_dorsalis
ENSAPOG00000012552	cth1	95	78.947	ENSSPAG00000018659	cth1	90	78.596	Stegastes_partitus
ENSAPOG00000012552	cth1	95	62.238	ENSTRUG00000012770	cth1	90	61.189	Takifugu_rubripes
ENSAPOG00000012552	cth1	94	61.620	ENSTNIG00000000740	cth1	89	59.507	Tetraodon_nigroviridis
ENSAPOG00000012552	cth1	86	59.514	ENSXCOG00000003710	cth1	82	57.265	Xiphophorus_couchianus
ENSAPOG00000012552	cth1	99	65.541	ENSXMAG00000023885	cth1	89	62.766	Xiphophorus_maculatus