EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000012653 (Gene tree)
Gene ID: 110967445
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 14382 bases
Position: chrMVNR01001818.1:68762-83143
Accession: 110967445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000010246	KH_1	PF00013.29	5.9e-16	1	1
ENSAPOP00000010214	KH_1	PF00013.29	7.5e-16	1	1
ENSAPOP00000010240	KH_1	PF00013.29	8.7e-16	1	1
ENSAPOP00000010246	TUDOR	PF00567.24	1.3e-27	1	1
ENSAPOP00000010214	TUDOR	PF00567.24	1.3e-27	1	1
ENSAPOP00000010240	TUDOR	PF00567.24	1.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000000157	-	2622	XM_022217045	ENSAPOP00000010246	558 (aa)	XP_022072737	UPI000B8FC396
ENSAPOT00000000227	-	1638	-	ENSAPOP00000010214	545 (aa)	-	-
ENSAPOT00000000182	-	2899	XM_022217044	ENSAPOP00000010240	632 (aa)	XP_022072736	UPI000B9032EC

Gene Model

Click here to download ENSAPOG00000012653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000012653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000012653	tdrkh	97	78.333	ENSACIG00000010318	tdrkh	98	78.333	Amphilophus_citrinellus
ENSAPOG00000012653	tdrkh	100	96.595	ENSAOCG00000020623	tdrkh	100	96.595	Amphiprion_ocellaris
ENSAPOG00000012653	tdrkh	100	96.237	ENSAPEG00000018388	tdrkh	100	96.237	Amphiprion_percula
ENSAPOG00000012653	tdrkh	100	82.437	ENSATEG00000023809	tdrkh	100	82.712	Anabas_testudineus
ENSAPOG00000012653	tdrkh	100	78.136	ENSACLG00000003017	tdrkh	100	77.599	Astatotilapia_calliptera
ENSAPOG00000012653	tdrkh	99	63.410	ENSAMXG00000011664	tdrkh	99	61.526	Astyanax_mexicanus
ENSAPOG00000012653	tdrkh	100	69.643	ENSCSEG00000002894	tdrkh	100	69.435	Cynoglossus_semilaevis
ENSAPOG00000012653	tdrkh	61	81.373	ENSCVAG00000020347	tdrkh	78	81.373	Cyprinodon_variegatus
ENSAPOG00000012653	tdrkh	99	64.043	ENSDARG00000053474	tdrkh	99	62.207	Danio_rerio
ENSAPOG00000012653	tdrkh	100	66.549	ENSELUG00000024537	tdrkh	100	65.833	Esox_lucius
ENSAPOG00000012653	tdrkh	100	75.806	ENSFHEG00000003544	tdrkh	100	74.731	Fundulus_heteroclitus
ENSAPOG00000012653	tdrkh	99	66.728	ENSGMOG00000009304	tdrkh	97	66.728	Gadus_morhua
ENSAPOG00000012653	tdrkh	100	70.968	ENSGAFG00000010754	tdrkh	100	69.534	Gambusia_affinis
ENSAPOG00000012653	tdrkh	99	75.758	ENSGACG00000015258	tdrkh	100	74.242	Gasterosteus_aculeatus
ENSAPOG00000012653	tdrkh	100	77.778	ENSHBUG00000017609	tdrkh	100	77.240	Haplochromis_burtoni
ENSAPOG00000012653	tdrkh	99	62.014	ENSIPUG00000009673	tdrkh	99	61.661	Ictalurus_punctatus
ENSAPOG00000012653	tdrkh	100	75.986	ENSKMAG00000016638	tdrkh	94	76.029	Kryptolebias_marmoratus
ENSAPOG00000012653	tdrkh	100	79.928	ENSLBEG00000027323	tdrkh	99	78.910	Labrus_bergylta
ENSAPOG00000012653	tdrkh	99	52.028	ENSLOCG00000011381	tdrkh	99	51.865	Lepisosteus_oculatus
ENSAPOG00000012653	tdrkh	100	79.749	ENSMAMG00000020343	tdrkh	100	79.749	Mastacembelus_armatus
ENSAPOG00000012653	tdrkh	100	78.136	ENSMZEG00005006755	tdrkh	100	77.599	Maylandia_zebra
ENSAPOG00000012653	tdrkh	99	76.770	ENSMMOG00000020663	tdrkh	96	76.770	Mola_mola
ENSAPOG00000012653	tdrkh	100	77.957	ENSMALG00000015401	tdrkh	100	76.523	Monopterus_albus
ENSAPOG00000012653	tdrkh	100	75.269	ENSNBRG00000023815	tdrkh	100	75.448	Neolamprologus_brichardi
ENSAPOG00000012653	tdrkh	100	71.685	ENSORLG00000029204	tdrkh	99	70.410	Oryzias_latipes
ENSAPOG00000012653	tdrkh	96	70.654	ENSORLG00020016168	tdrkh	97	72.387	Oryzias_latipes_hni
ENSAPOG00000012653	tdrkh	100	68.280	ENSORLG00015014094	tdrkh	97	71.810	Oryzias_latipes_hsok
ENSAPOG00000012653	tdrkh	100	72.581	ENSOMEG00000015063	tdrkh	92	70.893	Oryzias_melastigma
ENSAPOG00000012653	tdrkh	100	58.865	ENSPKIG00000017597	tdrkh	100	58.688	Paramormyrops_kingsleyae
ENSAPOG00000012653	tdrkh	100	68.430	ENSPMGG00000019362	tdrkh	100	68.607	Periophthalmus_magnuspinnatus
ENSAPOG00000012653	tdrkh	100	71.147	ENSPFOG00000013032	tdrkh	100	69.153	Poecilia_formosa
ENSAPOG00000012653	tdrkh	100	71.326	ENSPLAG00000004193	tdrkh	100	69.892	Poecilia_latipinna
ENSAPOG00000012653	tdrkh	100	71.147	ENSPMEG00000016502	tdrkh	100	69.713	Poecilia_mexicana
ENSAPOG00000012653	tdrkh	100	69.534	ENSPREG00000004213	tdrkh	100	67.458	Poecilia_reticulata
ENSAPOG00000012653	tdrkh	97	77.407	ENSPNYG00000022818	tdrkh	97	76.852	Pundamilia_nyererei
ENSAPOG00000012653	tdrkh	99	62.766	ENSPNAG00000008783	tdrkh	99	61.794	Pygocentrus_nattereri
ENSAPOG00000012653	tdrkh	100	55.694	ENSSFOG00015001048	tdrkh	100	56.050	Scleropages_formosus
ENSAPOG00000012653	tdrkh	100	81.216	ENSSMAG00000001532	tdrkh	100	81.216	Scophthalmus_maximus
ENSAPOG00000012653	tdrkh	100	81.416	ENSSDUG00000013393	tdrkh	100	81.947	Seriola_dumerili
ENSAPOG00000012653	tdrkh	100	82.124	ENSSLDG00000017418	tdrkh	100	82.124	Seriola_lalandi_dorsalis
ENSAPOG00000012653	tdrkh	100	91.756	ENSSPAG00000006435	tdrkh	100	92.034	Stegastes_partitus
ENSAPOG00000012653	tdrkh	97	72.222	ENSTRUG00000006644	tdrkh	97	72.222	Takifugu_rubripes
ENSAPOG00000012653	tdrkh	99	70.232	ENSTNIG00000003157	tdrkh	99	70.232	Tetraodon_nigroviridis
ENSAPOG00000012653	tdrkh	87	80.357	ENSXCOG00000016972	tdrkh	100	80.822	Xiphophorus_couchianus
ENSAPOG00000012653	tdrkh	100	69.534	ENSXMAG00000014756	tdrkh	100	68.100	Xiphophorus_maculatus