EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000012753 (Gene tree)
Gene ID: 110949762
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 20529 bases
Position: chrMVNR01000121.1:78162-98690
Accession: 110949762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000027904	TUDOR	PF00567.24	1.5e-06	1	1
ENSAPOP00000010334	TUDOR	PF00567.24	3.9e-06	1	1
ENSAPOP00000027901	TUDOR	PF00567.24	3.9e-06	1	1
ENSAPOP00000010334	SMN	PF06003.12	1.2e-31	1	3
ENSAPOP00000010334	SMN	PF06003.12	1.2e-31	2	3
ENSAPOP00000010334	SMN	PF06003.12	1.2e-31	3	3
ENSAPOP00000027901	SMN	PF06003.12	1.2e-31	1	2
ENSAPOP00000027901	SMN	PF06003.12	1.2e-31	2	2
ENSAPOP00000027904	SMN	PF06003.12	1e-28	1	2
ENSAPOP00000027904	SMN	PF06003.12	1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000000034	-	5702	XM_022191980	ENSAPOP00000027901	362 (aa)	XP_022047672	UPI000B8F2CC5
ENSAPOT00000000024	-	5182	XM_022191983	ENSAPOP00000010334	356 (aa)	XP_022047675	UPI000B8FBAD4
ENSAPOT00000000049	-	5414	XM_022191986	ENSAPOP00000027904	266 (aa)	XP_022047678	UPI000B90347B

Gene Model

Click here to download ENSAPOG00000012753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000012753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000012753	-	64	45.283	ENSGAFG00000009501	smn1	86	30.357	Gambusia_affinis
ENSAPOG00000012753	-	74	59.184	ENSLOCG00000000801	-	69	30.435	Lepisosteus_oculatus
ENSAPOG00000012753	-	64	45.283	ENSPLAG00000012071	smn1	86	30.357	Poecilia_latipinna
ENSAPOG00000012753	-	64	45.283	ENSPREG00000005824	smn1	86	30.357	Poecilia_reticulata
ENSAPOG00000012753	-	65	47.059	ENSRROG00000031088	-	64	47.059	Rhinopithecus_roxellana