EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000013387 (Gene tree)
Gene ID: 110969879
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: sal-like protein 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 6796 bases
Position: chrMVNR01002514.1:31590-38385
Accession: 110969879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000028253	zf-C2H2	PF00096.26	4.6e-18	1	2
ENSAPOP00000028253	zf-C2H2	PF00096.26	4.6e-18	2	2
ENSAPOP00000028258	zf-C2H2	PF00096.26	7.6e-18	1	2
ENSAPOP00000028258	zf-C2H2	PF00096.26	7.6e-18	2	2
ENSAPOP00000028253	zf-met	PF12874.7	4e-10	1	2
ENSAPOP00000028253	zf-met	PF12874.7	4e-10	2	2
ENSAPOP00000028258	zf-met	PF12874.7	6.8e-10	1	2
ENSAPOP00000028258	zf-met	PF12874.7	6.8e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000018285	-	5024	XM_022220058	ENSAPOP00000028258	1219 (aa)	XP_022075750	UPI000B90354A
ENSAPOT00000018278	-	3393	-	ENSAPOP00000028253	1130 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000013387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000013387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000013387	si:ch211-212k18.5	95	39.257	ENSAPOG00000015347	sall2	69	40.663

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000013387	si:ch211-212k18.5	80	84.270	ENSACIG00000019922	si:ch211-212k18.5	99	85.481	Amphilophus_citrinellus
ENSAPOG00000013387	si:ch211-212k18.5	100	91.571	ENSAOCG00000010737	si:ch211-212k18.5	100	92.062	Amphiprion_ocellaris
ENSAPOG00000013387	si:ch211-212k18.5	54	48.312	ENSAPEG00000020215	sall2	66	49.180	Amphiprion_percula
ENSAPOG00000013387	si:ch211-212k18.5	100	91.408	ENSAPEG00000006751	si:ch211-212k18.5	100	91.899	Amphiprion_percula
ENSAPOG00000013387	si:ch211-212k18.5	77	84.000	ENSATEG00000001254	si:ch211-212k18.5	100	84.000	Anabas_testudineus
ENSAPOG00000013387	si:ch211-212k18.5	74	78.947	ENSATEG00000007303	sall2	56	43.443	Anabas_testudineus
ENSAPOG00000013387	si:ch211-212k18.5	100	79.221	ENSACLG00000009709	si:ch211-212k18.5	100	79.464	Astatotilapia_calliptera
ENSAPOG00000013387	si:ch211-212k18.5	54	76.667	ENSACLG00000019867	sall2	50	76.667	Astatotilapia_calliptera
ENSAPOG00000013387	si:ch211-212k18.5	60	46.926	ENSAMXG00000020956	sall2	53	46.958	Astyanax_mexicanus
ENSAPOG00000013387	si:ch211-212k18.5	99	53.828	ENSAMXG00000010979	si:ch211-212k18.5	99	53.739	Astyanax_mexicanus
ENSAPOG00000013387	si:ch211-212k18.5	77	42.701	ENSCSEG00000021148	sall2	68	38.462	Cynoglossus_semilaevis
ENSAPOG00000013387	si:ch211-212k18.5	99	72.573	ENSCSEG00000004426	si:ch211-212k18.5	99	72.087	Cynoglossus_semilaevis
ENSAPOG00000013387	si:ch211-212k18.5	99	74.614	ENSCVAG00000007475	si:ch211-212k18.5	99	74.939	Cyprinodon_variegatus
ENSAPOG00000013387	si:ch211-212k18.5	97	56.079	ENSDARG00000103316	si:ch211-212k18.5	95	56.044	Danio_rerio
ENSAPOG00000013387	si:ch211-212k18.5	99	58.406	ENSELUG00000024534	si:ch211-212k18.5	100	56.121	Esox_lucius
ENSAPOG00000013387	si:ch211-212k18.5	71	50.000	ENSELUG00000004389	sall2	53	81.982	Esox_lucius
ENSAPOG00000013387	si:ch211-212k18.5	99	75.915	ENSFHEG00000017264	si:ch211-212k18.5	99	75.183	Fundulus_heteroclitus
ENSAPOG00000013387	si:ch211-212k18.5	99	74.104	ENSGAFG00000003746	si:ch211-212k18.5	99	74.267	Gambusia_affinis
ENSAPOG00000013387	si:ch211-212k18.5	100	79.545	ENSHBUG00000019672	si:ch211-212k18.5	100	79.789	Haplochromis_burtoni
ENSAPOG00000013387	si:ch211-212k18.5	97	62.752	ENSHCOG00000002842	si:ch211-212k18.5	99	61.144	Hippocampus_comes
ENSAPOG00000013387	si:ch211-212k18.5	98	52.669	ENSIPUG00000002559	sall2	99	51.759	Ictalurus_punctatus
ENSAPOG00000013387	si:ch211-212k18.5	99	74.128	ENSKMAG00000019657	si:ch211-212k18.5	99	75.182	Kryptolebias_marmoratus
ENSAPOG00000013387	si:ch211-212k18.5	100	76.648	ENSLBEG00000020887	si:ch211-212k18.5	100	75.834	Labrus_bergylta
ENSAPOG00000013387	si:ch211-212k18.5	70	87.893	ENSMAMG00000015887	si:ch211-212k18.5	90	97.059	Mastacembelus_armatus
ENSAPOG00000013387	si:ch211-212k18.5	100	79.383	ENSMZEG00005021214	si:ch211-212k18.5	100	79.627	Maylandia_zebra
ENSAPOG00000013387	si:ch211-212k18.5	91	84.270	ENSMMOG00000012726	si:ch211-212k18.5	100	82.921	Mola_mola
ENSAPOG00000013387	si:ch211-212k18.5	99	77.642	ENSMALG00000000979	si:ch211-212k18.5	97	79.319	Monopterus_albus
ENSAPOG00000013387	si:ch211-212k18.5	67	47.692	ENSNBRG00000017645	sall2	76	46.301	Neolamprologus_brichardi
ENSAPOG00000013387	si:ch211-212k18.5	94	76.364	ENSNBRG00000023948	si:ch211-212k18.5	96	75.931	Neolamprologus_brichardi
ENSAPOG00000013387	si:ch211-212k18.5	99	71.934	ENSORLG00000030429	si:ch211-212k18.5	99	71.276	Oryzias_latipes
ENSAPOG00000013387	si:ch211-212k18.5	51	76.000	ENSORLG00000026871	sall2	75	39.381	Oryzias_latipes
ENSAPOG00000013387	si:ch211-212k18.5	54	47.969	ENSORLG00020007873	sall2	75	39.278	Oryzias_latipes_hni
ENSAPOG00000013387	si:ch211-212k18.5	99	71.687	ENSORLG00020008145	si:ch211-212k18.5	99	71.358	Oryzias_latipes_hni
ENSAPOG00000013387	si:ch211-212k18.5	99	71.523	ENSORLG00015004982	si:ch211-212k18.5	99	71.358	Oryzias_latipes_hsok
ENSAPOG00000013387	si:ch211-212k18.5	78	43.333	ENSORLG00015002422	sall2	75	39.282	Oryzias_latipes_hsok
ENSAPOG00000013387	si:ch211-212k18.5	54	47.751	ENSOMEG00000012904	sall2	75	39.487	Oryzias_melastigma
ENSAPOG00000013387	si:ch211-212k18.5	100	70.469	ENSOMEG00000013949	si:ch211-212k18.5	100	70.631	Oryzias_melastigma
ENSAPOG00000013387	si:ch211-212k18.5	71	51.709	ENSPKIG00000009207	sall2	67	44.108	Paramormyrops_kingsleyae
ENSAPOG00000013387	si:ch211-212k18.5	94	67.627	ENSPMGG00000018714	si:ch211-212k18.5	99	67.363	Periophthalmus_magnuspinnatus
ENSAPOG00000013387	si:ch211-212k18.5	99	74.754	ENSPFOG00000023705	si:ch211-212k18.5	99	75.716	Poecilia_formosa
ENSAPOG00000013387	si:ch211-212k18.5	99	73.874	ENSPLAG00000002577	si:ch211-212k18.5	99	74.125	Poecilia_latipinna
ENSAPOG00000013387	si:ch211-212k18.5	99	74.672	ENSPMEG00000016395	si:ch211-212k18.5	99	75.629	Poecilia_mexicana
ENSAPOG00000013387	si:ch211-212k18.5	99	73.786	ENSPREG00000005292	si:ch211-212k18.5	99	74.288	Poecilia_reticulata
ENSAPOG00000013387	si:ch211-212k18.5	100	75.974	ENSPNYG00000021576	si:ch211-212k18.5	100	76.299	Pundamilia_nyererei
ENSAPOG00000013387	si:ch211-212k18.5	99	54.992	ENSPNAG00000006123	si:ch211-212k18.5	99	54.430	Pygocentrus_nattereri
ENSAPOG00000013387	si:ch211-212k18.5	100	78.849	ENSSMAG00000006241	si:ch211-212k18.5	100	77.147	Scophthalmus_maximus
ENSAPOG00000013387	si:ch211-212k18.5	100	82.915	ENSSDUG00000006164	si:ch211-212k18.5	100	82.834	Seriola_dumerili
ENSAPOG00000013387	si:ch211-212k18.5	94	41.869	ENSSDUG00000012274	sall2	69	39.343	Seriola_dumerili
ENSAPOG00000013387	si:ch211-212k18.5	100	84.453	ENSSLDG00000003393	si:ch211-212k18.5	100	84.372	Seriola_lalandi_dorsalis
ENSAPOG00000013387	si:ch211-212k18.5	94	41.923	ENSSLDG00000001653	sall2	69	38.905	Seriola_lalandi_dorsalis
ENSAPOG00000013387	si:ch211-212k18.5	94	89.121	ENSSPAG00000013435	si:ch211-212k18.5	97	88.947	Stegastes_partitus
ENSAPOG00000013387	si:ch211-212k18.5	54	48.564	ENSSPAG00000023009	sall2	69	39.740	Stegastes_partitus
ENSAPOG00000013387	si:ch211-212k18.5	93	74.705	ENSTRUG00000025082	si:ch211-212k18.5	95	72.990	Takifugu_rubripes
ENSAPOG00000013387	si:ch211-212k18.5	79	38.839	ENSTRUG00000024556	sall2	76	38.017	Takifugu_rubripes
ENSAPOG00000013387	si:ch211-212k18.5	99	71.780	ENSXCOG00000000762	si:ch211-212k18.5	99	71.603	Xiphophorus_couchianus
ENSAPOG00000013387	si:ch211-212k18.5	99	73.892	ENSXMAG00000001461	si:ch211-212k18.5	99	73.556	Xiphophorus_maculatus