EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000013484 (Gene tree)
Gene ID: 110957301
Gene Symbol: upf3a
Alias: -
Full Name: UPF3A%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 7813 bases
Position: chrMVNR01000528.1:291245-299057
Accession: 110957301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000010976	Smg4_UPF3	PF03467.15	1.2e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000018512	-	1825	XM_022203249	ENSAPOP00000010976	461 (aa)	XP_022058941	UPI000B903877

Gene Model

Click here to download ENSAPOG00000013484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000013484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000013484	upf3a	89	57.639	ENSG00000169062	UPF3A	90	57.870	Homo_sapiens
ENSAPOG00000013484	upf3a	98	93.067	ENSACIG00000020468	upf3a	99	93.067	Amphilophus_citrinellus
ENSAPOG00000013484	upf3a	100	98.920	ENSAOCG00000020784	upf3a	100	98.920	Amphiprion_ocellaris
ENSAPOG00000013484	upf3a	60	62.373	ENSAOCG00000000706	upf3b	91	50.117	Amphiprion_ocellaris
ENSAPOG00000013484	upf3a	100	98.920	ENSAPEG00000003519	upf3a	100	98.920	Amphiprion_percula
ENSAPOG00000013484	upf3a	100	94.600	ENSATEG00000005843	upf3a	100	94.600	Anabas_testudineus
ENSAPOG00000013484	upf3a	83	67.342	ENSACAG00000001540	UPF3A	94	67.342	Anolis_carolinensis
ENSAPOG00000013484	upf3a	84	45.301	ENSANAG00000025598	-	72	66.667	Aotus_nancymaae
ENSAPOG00000013484	upf3a	93	53.205	ENSANAG00000021713	UPF3A	99	52.929	Aotus_nancymaae
ENSAPOG00000013484	upf3a	82	51.471	ENSANAG00000021894	-	77	70.303	Aotus_nancymaae
ENSAPOG00000013484	upf3a	100	93.139	ENSACLG00000026274	upf3a	100	93.139	Astatotilapia_calliptera
ENSAPOG00000013484	upf3a	98	83.628	ENSAMXG00000002608	upf3a	99	83.444	Astyanax_mexicanus
ENSAPOG00000013484	upf3a	91	55.982	ENSCJAG00000019102	UPF3A	92	56.208	Callithrix_jacchus
ENSAPOG00000013484	upf3a	82	51.471	ENSCJAG00000004975	UPF3B	77	69.697	Callithrix_jacchus
ENSAPOG00000013484	upf3a	85	46.117	ENSCAFG00020004074	UPF3B	69	66.279	Canis_lupus_dingo
ENSAPOG00000013484	upf3a	89	55.324	ENSCHIG00000008682	UPF3A	85	55.324	Capra_hircus
ENSAPOG00000013484	upf3a	75	54.400	ENSTSYG00000001918	UPF3A	99	54.400	Carlito_syrichta
ENSAPOG00000013484	upf3a	82	51.825	ENSTSYG00000014690	UPF3B	76	65.294	Carlito_syrichta
ENSAPOG00000013484	upf3a	91	56.659	ENSCCAG00000018406	UPF3A	97	55.388	Cebus_capucinus
ENSAPOG00000013484	upf3a	81	38.961	ENSCCAG00000029813	-	52	59.494	Cebus_capucinus
ENSAPOG00000013484	upf3a	91	58.525	ENSCATG00000029733	UPF3A	93	58.447	Cercocebus_atys
ENSAPOG00000013484	upf3a	91	58.296	ENSCSAG00000017388	UPF3A	92	57.848	Chlorocebus_sabaeus
ENSAPOG00000013484	upf3a	82	58.947	ENSCGRG00001017387	Upf3a	87	56.736	Cricetulus_griseus_chok1gshd
ENSAPOG00000013484	upf3a	82	58.947	ENSCGRG00000001468	Upf3a	87	56.736	Cricetulus_griseus_crigri
ENSAPOG00000013484	upf3a	99	91.126	ENSCSEG00000005106	upf3a	99	91.126	Cynoglossus_semilaevis
ENSAPOG00000013484	upf3a	100	88.362	ENSCVAG00000022333	upf3a	100	88.362	Cyprinodon_variegatus
ENSAPOG00000013484	upf3a	99	80.477	ENSDARG00000069297	upf3a	99	81.278	Danio_rerio
ENSAPOG00000013484	upf3a	81	60.902	ENSDNOG00000034391	UPF3A	90	60.902	Dasypus_novemcinctus
ENSAPOG00000013484	upf3a	92	52.586	ENSETEG00000010110	UPF3A	96	52.586	Echinops_telfairi
ENSAPOG00000013484	upf3a	82	48.250	ENSEASG00005012919	UPF3B	62	69.565	Equus_asinus_asinus
ENSAPOG00000013484	upf3a	82	48.250	ENSECAG00000016947	UPF3B	62	62.857	Equus_caballus
ENSAPOG00000013484	upf3a	98	83.514	ENSELUG00000011050	upf3a	99	83.333	Esox_lucius
ENSAPOG00000013484	upf3a	90	58.465	ENSFCAG00000014602	UPF3A	92	58.465	Felis_catus
ENSAPOG00000013484	upf3a	100	90.302	ENSGAFG00000021170	upf3a	100	90.302	Gambusia_affinis
ENSAPOG00000013484	upf3a	69	83.750	ENSGACG00000001972	upf3a	100	83.750	Gasterosteus_aculeatus
ENSAPOG00000013484	upf3a	51	67.886	ENSGACG00000017435	upf3b	60	72.393	Gasterosteus_aculeatus
ENSAPOG00000013484	upf3a	81	49.202	ENSGGOG00000043074	-	80	47.028	Gorilla_gorilla
ENSAPOG00000013484	upf3a	89	58.392	ENSGGOG00000015428	UPF3A	90	58.392	Gorilla_gorilla
ENSAPOG00000013484	upf3a	81	49.202	ENSGGOG00000041219	-	85	47.273	Gorilla_gorilla
ENSAPOG00000013484	upf3a	100	96.544	ENSHBUG00000011325	upf3a	100	96.544	Haplochromis_burtoni
ENSAPOG00000013484	upf3a	82	54.453	ENSHGLG00000001544	UPF3A	50	66.825	Heterocephalus_glaber_female
ENSAPOG00000013484	upf3a	82	54.453	ENSHGLG00100013244	UPF3A	50	66.825	Heterocephalus_glaber_male
ENSAPOG00000013484	upf3a	97	80.000	ENSHCOG00000013985	upf3a	96	80.444	Hippocampus_comes
ENSAPOG00000013484	upf3a	98	81.678	ENSIPUG00000023450	upf3a	99	81.498	Ictalurus_punctatus
ENSAPOG00000013484	upf3a	100	94.181	ENSKMAG00000004381	upf3a	100	94.181	Kryptolebias_marmoratus
ENSAPOG00000013484	upf3a	98	88.791	ENSLBEG00000021570	upf3a	100	87.965	Labrus_bergylta
ENSAPOG00000013484	upf3a	60	43.402	ENSLACG00000006645	UPF3A	66	87.500	Latimeria_chalumnae
ENSAPOG00000013484	upf3a	97	76.035	ENSLOCG00000002665	upf3a	98	76.035	Lepisosteus_oculatus
ENSAPOG00000013484	upf3a	91	57.176	ENSMFAG00000045016	UPF3A	92	56.944	Macaca_fascicularis
ENSAPOG00000013484	upf3a	88	59.024	ENSMMUG00000007449	UPF3A	93	58.042	Macaca_mulatta
ENSAPOG00000013484	upf3a	83	61.140	ENSMNEG00000036402	UPF3A	80	61.140	Macaca_nemestrina
ENSAPOG00000013484	upf3a	83	60.622	ENSMLEG00000014726	UPF3A	90	60.622	Mandrillus_leucophaeus
ENSAPOG00000013484	upf3a	100	91.232	ENSMAMG00000018364	upf3a	100	91.232	Mastacembelus_armatus
ENSAPOG00000013484	upf3a	100	93.139	ENSMZEG00005021571	upf3a	100	93.139	Maylandia_zebra
ENSAPOG00000013484	upf3a	86	63.504	ENSMGAG00000014837	UPF3A	99	63.814	Meleagris_gallopavo
ENSAPOG00000013484	upf3a	58	67.870	ENSMOCG00000000550	Upf3a	57	69.307	Microtus_ochrogaster
ENSAPOG00000013484	upf3a	100	88.542	ENSMMOG00000019751	upf3a	100	88.542	Mola_mola
ENSAPOG00000013484	upf3a	84	67.419	ENSMODG00000003159	UPF3A	93	68.250	Monodelphis_domestica
ENSAPOG00000013484	upf3a	80	61.702	MGP_PahariEiJ_G0021311	Upf3a	87	59.200	Mus_pahari
ENSAPOG00000013484	upf3a	92	56.114	ENSMPUG00000009139	UPF3A	94	56.114	Mustela_putorius_furo
ENSAPOG00000013484	upf3a	81	61.125	ENSMLUG00000015905	UPF3A	92	61.125	Myotis_lucifugus
ENSAPOG00000013484	upf3a	87	54.824	ENSNGAG00000019314	Upf3a	54	64.159	Nannospalax_galili
ENSAPOG00000013484	upf3a	100	96.328	ENSNBRG00000000828	upf3a	100	96.328	Neolamprologus_brichardi
ENSAPOG00000013484	upf3a	89	58.726	ENSNLEG00000007563	UPF3A	90	58.726	Nomascus_leucogenys
ENSAPOG00000013484	upf3a	100	95.708	ENSONIG00000006817	upf3a	100	95.708	Oreochromis_niloticus
ENSAPOG00000013484	upf3a	77	57.065	ENSOANG00000006985	-	95	57.065	Ornithorhynchus_anatinus
ENSAPOG00000013484	upf3a	100	87.152	ENSORLG00000010911	upf3a	100	87.152	Oryzias_latipes
ENSAPOG00000013484	upf3a	100	86.393	ENSORLG00020014317	upf3a	100	86.393	Oryzias_latipes_hni
ENSAPOG00000013484	upf3a	82	44.175	ENSORLG00020003758	upf3b	51	69.595	Oryzias_latipes_hni
ENSAPOG00000013484	upf3a	100	87.257	ENSORLG00015017339	upf3a	58	87.257	Oryzias_latipes_hsok
ENSAPOG00000013484	upf3a	100	89.633	ENSOMEG00000014425	upf3a	100	89.633	Oryzias_melastigma
ENSAPOG00000013484	upf3a	73	61.891	ENSOGAG00000004788	UPF3A	84	61.891	Otolemur_garnettii
ENSAPOG00000013484	upf3a	84	58.706	ENSOARG00000009004	UPF3A	84	58.706	Ovis_aries
ENSAPOG00000013484	upf3a	89	57.407	ENSPPAG00000042267	UPF3A	91	57.639	Pan_paniscus
ENSAPOG00000013484	upf3a	90	58.239	ENSPPRG00000025062	UPF3A	92	58.239	Panthera_pardus
ENSAPOG00000013484	upf3a	81	48.831	ENSPTRG00000041187	-	85	45.455	Pan_troglodytes
ENSAPOG00000013484	upf3a	81	45.195	ENSPTRG00000051640	-	85	43.896	Pan_troglodytes
ENSAPOG00000013484	upf3a	89	57.407	ENSPTRG00000006073	UPF3A	90	57.639	Pan_troglodytes
ENSAPOG00000013484	upf3a	89	60.142	ENSPANG00000004346	UPF3A	90	60.142	Papio_anubis
ENSAPOG00000013484	upf3a	90	50.222	ENSPKIG00000019226	upf3b	86	68.794	Paramormyrops_kingsleyae
ENSAPOG00000013484	upf3a	93	72.826	ENSPKIG00000004422	upf3a	94	72.826	Paramormyrops_kingsleyae
ENSAPOG00000013484	upf3a	83	67.677	ENSPSIG00000007468	UPF3A	96	67.677	Pelodiscus_sinensis
ENSAPOG00000013484	upf3a	100	83.918	ENSPMGG00000012696	upf3a	100	83.918	Periophthalmus_magnuspinnatus
ENSAPOG00000013484	upf3a	80	60.377	ENSPEMG00000019968	-	87	58.247	Peromyscus_maniculatus_bairdii
ENSAPOG00000013484	upf3a	74	70.925	ENSPCIG00000019590	-	90	70.388	Phascolarctos_cinereus
ENSAPOG00000013484	upf3a	100	91.361	ENSPFOG00000013222	upf3a	100	91.361	Poecilia_formosa
ENSAPOG00000013484	upf3a	98	90.372	ENSPLAG00000011960	upf3a	100	90.372	Poecilia_latipinna
ENSAPOG00000013484	upf3a	100	87.164	ENSPMEG00000000836	upf3a	100	87.164	Poecilia_mexicana
ENSAPOG00000013484	upf3a	89	57.639	ENSPPYG00000005536	UPF3A	90	57.870	Pongo_abelii
ENSAPOG00000013484	upf3a	86	45.368	ENSPCOG00000021960	UPF3B	51	70.732	Propithecus_coquereli
ENSAPOG00000013484	upf3a	82	58.418	ENSPVAG00000005656	UPF3A	82	54.745	Pteropus_vampyrus
ENSAPOG00000013484	upf3a	100	93.139	ENSPNYG00000011289	upf3a	100	93.139	Pundamilia_nyererei
ENSAPOG00000013484	upf3a	98	81.678	ENSPNAG00000019532	upf3a	100	81.538	Pygocentrus_nattereri
ENSAPOG00000013484	upf3a	84	52.482	ENSPNAG00000021528	upf3b	54	74.233	Pygocentrus_nattereri
ENSAPOG00000013484	upf3a	85	59.698	ENSRBIG00000034007	UPF3A	91	59.158	Rhinopithecus_bieti
ENSAPOG00000013484	upf3a	83	60.779	ENSRROG00000012212	UPF3A	83	60.411	Rhinopithecus_roxellana
ENSAPOG00000013484	upf3a	91	50.113	ENSSBOG00000029989	UPF3A	92	50.226	Saimiri_boliviensis_boliviensis
ENSAPOG00000013484	upf3a	82	51.463	ENSSBOG00000019740	UPF3B	78	71.166	Saimiri_boliviensis_boliviensis
ENSAPOG00000013484	upf3a	83	67.929	ENSSHAG00000009895	UPF3A	94	68.514	Sarcophilus_harrisii
ENSAPOG00000013484	upf3a	98	72.527	ENSSFOG00015021851	upf3a	99	71.491	Scleropages_formosus
ENSAPOG00000013484	upf3a	100	85.132	ENSSMAG00000003858	upf3a	100	86.354	Scophthalmus_maximus
ENSAPOG00000013484	upf3a	52	68.526	ENSSMAG00000012913	upf3b	53	74.233	Scophthalmus_maximus
ENSAPOG00000013484	upf3a	100	93.319	ENSSDUG00000009680	upf3a	100	93.319	Seriola_dumerili
ENSAPOG00000013484	upf3a	100	96.544	ENSSLDG00000009700	upf3a	100	96.544	Seriola_lalandi_dorsalis
ENSAPOG00000013484	upf3a	100	96.976	ENSSPAG00000007938	upf3a	100	96.976	Stegastes_partitus
ENSAPOG00000013484	upf3a	87	56.338	ENSSSCG00000024679	UPF3A	51	69.712	Sus_scrofa
ENSAPOG00000013484	upf3a	83	68.608	ENSTGUG00000009493	UPF3A	99	68.608	Taeniopygia_guttata
ENSAPOG00000013484	upf3a	98	87.196	ENSTRUG00000012730	upf3a	99	87.196	Takifugu_rubripes
ENSAPOG00000013484	upf3a	84	77.411	ENSTNIG00000014973	upf3a	100	76.904	Tetraodon_nigroviridis
ENSAPOG00000013484	upf3a	82	46.384	ENSUAMG00000024565	UPF3B	66	63.750	Ursus_americanus
ENSAPOG00000013484	upf3a	80	59.008	ENSVPAG00000003525	UPF3A	94	57.702	Vicugna_pacos
ENSAPOG00000013484	upf3a	82	46.617	ENSVVUG00000011594	UPF3B	77	70.303	Vulpes_vulpes
ENSAPOG00000013484	upf3a	90	55.841	ENSXETG00000002572	upf3a	100	55.841	Xenopus_tropicalis
ENSAPOG00000013484	upf3a	83	46.040	ENSXETG00000007440	upf3b	71	72.393	Xenopus_tropicalis
ENSAPOG00000013484	upf3a	100	90.948	ENSXMAG00000013452	upf3a	100	90.948	Xiphophorus_maculatus