EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000013736 (Gene tree)
Gene ID: 110958446
Gene Symbol: chd6
Alias: si:dkey-6e2.3|zmp:0000000556
Full Name: chromodomain-helicase-DNA-binding protein 6-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 129608 bases
Position: chrMVNR01000617.1:158164-287771
Accession: 110958446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000011207	ResIII	PF04851.15	1.3e-06	1	1
ENSAPOP00000011207	BRK	PF07533.16	3.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000018724	-	10655	XM_022204996	ENSAPOP00000011207	3544 (aa)	XP_022060688	UPI000B8F4BE3

Gene Model

Click here to download ENSAPOG00000013736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000013736's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000013736	chd6	55	63.133	ENSAPOG00000023034	chd9	72	64.291

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000013736	chd6	64	75.963	ENSG00000124177	CHD6	99	82.239	Homo_sapiens
ENSAPOG00000013736	chd6	64	75.711	ENSAMEG00000009496	CHD6	75	75.545	Ailuropoda_melanoleuca
ENSAPOG00000013736	chd6	99	83.954	ENSATEG00000005608	chd6	99	84.866	Anabas_testudineus
ENSAPOG00000013736	chd6	66	76.018	ENSAPLG00000015592	CHD6	75	76.222	Anas_platyrhynchos
ENSAPOG00000013736	chd6	64	71.506	ENSACAG00000006842	CHD6	73	70.033	Anolis_carolinensis
ENSAPOG00000013736	chd6	67	71.945	ENSANAG00000037548	CHD6	99	82.418	Aotus_nancymaae
ENSAPOG00000013736	chd6	78	71.221	ENSAMXG00000009576	chd6	84	71.888	Astyanax_mexicanus
ENSAPOG00000013736	chd6	66	74.198	ENSBTAG00000005733	CHD6	76	74.198	Bos_taurus
ENSAPOG00000013736	chd6	67	71.883	ENSCJAG00000017920	CHD6	99	82.234	Callithrix_jacchus
ENSAPOG00000013736	chd6	67	72.330	ENSCAFG00000009236	CHD6	72	75.165	Canis_familiaris
ENSAPOG00000013736	chd6	67	72.267	ENSCAFG00020012906	CHD6	95	84.971	Canis_lupus_dingo
ENSAPOG00000013736	chd6	66	74.401	ENSCHIG00000017606	CHD6	74	74.115	Capra_hircus
ENSAPOG00000013736	chd6	56	76.830	ENSTSYG00000014635	CHD6	77	76.669	Carlito_syrichta
ENSAPOG00000013736	chd6	64	75.446	ENSCPOG00000015641	CHD6	74	75.363	Cavia_porcellus
ENSAPOG00000013736	chd6	67	72.007	ENSCCAG00000036828	CHD6	99	82.418	Cebus_capucinus
ENSAPOG00000013736	chd6	64	75.447	ENSCATG00000039248	CHD6	99	82.418	Cercocebus_atys
ENSAPOG00000013736	chd6	67	72.512	ENSCLAG00000013743	CHD6	77	71.831	Chinchilla_lanigera
ENSAPOG00000013736	chd6	64	75.896	ENSCSAG00000013997	CHD6	74	75.347	Chlorocebus_sabaeus
ENSAPOG00000013736	chd6	61	76.203	ENSCPBG00000019382	CHD6	74	76.090	Chrysemys_picta_bellii
ENSAPOG00000013736	chd6	64	75.764	ENSCANG00000043435	CHD6	99	82.418	Colobus_angolensis_palliatus
ENSAPOG00000013736	chd6	66	75.750	ENSCGRG00001002694	Chd6	74	75.449	Cricetulus_griseus_chok1gshd
ENSAPOG00000013736	chd6	86	70.729	ENSDARG00000017244	chd6	92	69.832	Danio_rerio
ENSAPOG00000013736	chd6	64	76.368	ENSDNOG00000004176	CHD6	74	76.200	Dasypus_novemcinctus
ENSAPOG00000013736	chd6	61	81.611	ENSEASG00005023433	CHD6	95	86.513	Equus_asinus_asinus
ENSAPOG00000013736	chd6	71	69.406	ENSECAG00000011761	CHD6	74	75.844	Equus_caballus
ENSAPOG00000013736	chd6	63	78.229	ENSELUG00000012309	chd6	94	78.022	Esox_lucius
ENSAPOG00000013736	chd6	71	69.160	ENSFCAG00000003572	CHD6	74	75.347	Felis_catus
ENSAPOG00000013736	chd6	67	74.710	ENSFALG00000012563	CHD6	73	76.311	Ficedula_albicollis
ENSAPOG00000013736	chd6	64	75.380	ENSFDAG00000013791	CHD6	75	75.148	Fukomys_damarensis
ENSAPOG00000013736	chd6	60	83.405	ENSGMOG00000011715	chd6	89	83.405	Gadus_morhua
ENSAPOG00000013736	chd6	79	85.055	ENSGACG00000000037	chd6	98	81.422	Gasterosteus_aculeatus
ENSAPOG00000013736	chd6	64	75.963	ENSGGOG00000013123	CHD6	99	82.418	Gorilla_gorilla
ENSAPOG00000013736	chd6	99	86.283	ENSHBUG00000014701	chd6	99	87.390	Haplochromis_burtoni
ENSAPOG00000013736	chd6	67	72.246	ENSHGLG00000004548	CHD6	76	73.580	Heterocephalus_glaber_female
ENSAPOG00000013736	chd6	67	72.246	ENSHGLG00100006401	CHD6	76	73.580	Heterocephalus_glaber_male
ENSAPOG00000013736	chd6	75	80.151	ENSIPUG00000003692	chd6	84	75.870	Ictalurus_punctatus
ENSAPOG00000013736	chd6	67	72.198	ENSSTOG00000013382	CHD6	74	75.231	Ictidomys_tridecemlineatus
ENSAPOG00000013736	chd6	60	77.011	ENSLACG00000010881	CHD6	73	74.807	Latimeria_chalumnae
ENSAPOG00000013736	chd6	63	78.635	ENSLOCG00000007386	chd6	85	72.231	Lepisosteus_oculatus
ENSAPOG00000013736	chd6	64	75.858	ENSLAFG00000012144	CHD6	75	75.626	Loxodonta_africana
ENSAPOG00000013736	chd6	64	75.896	ENSMFAG00000032830	CHD6	99	82.418	Macaca_fascicularis
ENSAPOG00000013736	chd6	64	75.896	ENSMMUG00000020458	CHD6	99	82.418	Macaca_mulatta
ENSAPOG00000013736	chd6	64	75.896	ENSMNEG00000040847	CHD6	99	82.418	Macaca_nemestrina
ENSAPOG00000013736	chd6	67	72.240	ENSMLEG00000031965	CHD6	99	82.418	Mandrillus_leucophaeus
ENSAPOG00000013736	chd6	99	84.765	ENSMAMG00000013111	chd6	99	84.544	Mastacembelus_armatus
ENSAPOG00000013736	chd6	66	74.426	ENSMGAG00000001121	CHD6	76	74.166	Meleagris_gallopavo
ENSAPOG00000013736	chd6	67	72.472	ENSMICG00000016641	CHD6	99	82.234	Microcebus_murinus
ENSAPOG00000013736	chd6	60	78.136	ENSMODG00000000720	-	78	78.022	Monodelphis_domestica
ENSAPOG00000013736	chd6	61	75.735	MGP_CAROLIEiJ_G0024604	Chd6	85	83.712	Mus_caroli
ENSAPOG00000013736	chd6	64	75.802	ENSMUSG00000057133	Chd6	89	80.582	Mus_musculus
ENSAPOG00000013736	chd6	64	75.550	MGP_PahariEiJ_G0026048	Chd6	85	83.613	Mus_pahari
ENSAPOG00000013736	chd6	61	75.802	MGP_SPRETEiJ_G0025526	Chd6	89	80.582	Mus_spretus
ENSAPOG00000013736	chd6	64	75.931	ENSMPUG00000017695	CHD6	74	75.697	Mustela_putorius_furo
ENSAPOG00000013736	chd6	67	72.309	ENSMLUG00000016247	CHD6	75	71.193	Myotis_lucifugus
ENSAPOG00000013736	chd6	85	82.290	ENSNBRG00000013839	chd6	97	82.196	Neolamprologus_brichardi
ENSAPOG00000013736	chd6	65	71.875	ENSNLEG00000006496	CHD6	77	70.375	Nomascus_leucogenys
ENSAPOG00000013736	chd6	64	73.709	ENSOPRG00000013376	-	73	73.413	Ochotona_princeps
ENSAPOG00000013736	chd6	85	86.478	ENSONIG00000000393	chd6	99	86.478	Oreochromis_niloticus
ENSAPOG00000013736	chd6	55	74.422	ENSOANG00000014347	CHD6	64	74.570	Ornithorhynchus_anatinus
ENSAPOG00000013736	chd6	64	76.254	ENSOCUG00000012394	CHD6	74	75.632	Oryctolagus_cuniculus
ENSAPOG00000013736	chd6	99	73.671	ENSORLG00020021891	chd6	95	94.589	Oryzias_latipes_hni
ENSAPOG00000013736	chd6	67	70.968	ENSOGAG00000002427	CHD6	72	74.655	Otolemur_garnettii
ENSAPOG00000013736	chd6	66	71.285	ENSOARG00000002597	CHD6	74	72.850	Ovis_aries
ENSAPOG00000013736	chd6	71	69.218	ENSPPRG00000014756	CHD6	74	75.413	Panthera_pardus
ENSAPOG00000013736	chd6	71	69.046	ENSPTIG00000011094	CHD6	74	75.215	Panthera_tigris_altaica
ENSAPOG00000013736	chd6	64	75.963	ENSPTRG00000013504	CHD6	99	82.418	Pan_troglodytes
ENSAPOG00000013736	chd6	64	75.896	ENSPANG00000025554	CHD6	99	82.418	Papio_anubis
ENSAPOG00000013736	chd6	75	72.625	ENSPKIG00000005578	chd6	85	74.142	Paramormyrops_kingsleyae
ENSAPOG00000013736	chd6	78	80.350	ENSPMGG00000014877	chd6	99	79.219	Periophthalmus_magnuspinnatus
ENSAPOG00000013736	chd6	65	75.826	ENSPCIG00000028037	CHD6	74	75.694	Phascolarctos_cinereus
ENSAPOG00000013736	chd6	99	78.067	ENSPLAG00000003128	chd6	99	78.443	Poecilia_latipinna
ENSAPOG00000013736	chd6	99	77.588	ENSPREG00000022653	chd6	99	95.055	Poecilia_reticulata
ENSAPOG00000013736	chd6	67	72.336	ENSPPYG00000011016	CHD6	77	71.306	Pongo_abelii
ENSAPOG00000013736	chd6	67	72.229	ENSPCOG00000001089	CHD6	99	82.418	Propithecus_coquereli
ENSAPOG00000013736	chd6	85	84.397	ENSPNYG00000022516	chd6	97	84.583	Pundamilia_nyererei
ENSAPOG00000013736	chd6	85	71.990	ENSPNAG00000012825	chd6	90	68.980	Pygocentrus_nattereri
ENSAPOG00000013736	chd6	66	72.414	ENSRNOG00000016744	Chd6	74	74.818	Rattus_norvegicus
ENSAPOG00000013736	chd6	67	72.336	ENSSBOG00000022089	CHD6	99	82.418	Saimiri_boliviensis_boliviensis
ENSAPOG00000013736	chd6	65	75.230	ENSSHAG00000017072	CHD6	75	75.099	Sarcophilus_harrisii
ENSAPOG00000013736	chd6	78	68.056	ENSSFOG00015012920	chd6	91	87.166	Scleropages_formosus
ENSAPOG00000013736	chd6	65	76.096	ENSSSCG00000007360	CHD6	73	75.446	Sus_scrofa
ENSAPOG00000013736	chd6	67	74.710	ENSTGUG00000003179	CHD6	78	76.326	Taeniopygia_guttata
ENSAPOG00000013736	chd6	77	84.828	ENSTNIG00000017487	chd6	99	84.214	Tetraodon_nigroviridis
ENSAPOG00000013736	chd6	62	80.017	ENSTTRG00000013438	CHD6	71	78.595	Tursiops_truncatus
ENSAPOG00000013736	chd6	59	83.805	ENSUAMG00000024036	CHD6	95	84.971	Ursus_americanus
ENSAPOG00000013736	chd6	62	75.778	ENSUMAG00000002017	CHD6	95	84.971	Ursus_maritimus
ENSAPOG00000013736	chd6	60	70.379	ENSVPAG00000007941	CHD6	70	67.926	Vicugna_pacos
ENSAPOG00000013736	chd6	67	72.534	ENSVVUG00000029164	CHD6	72	75.066	Vulpes_vulpes
ENSAPOG00000013736	chd6	67	67.544	ENSXETG00000021445	chd6	75	67.787	Xenopus_tropicalis