EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000014135 (Gene tree)
Gene ID: 110948036
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 9826 bases
Position: chrMVNR01000063.1:363688-373513
Accession: 110948036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000011544	zf-C2H2	PF00096.26	1.6e-14	1	3
ENSAPOP00000011544	zf-C2H2	PF00096.26	1.6e-14	2	3
ENSAPOP00000011544	zf-C2H2	PF00096.26	1.6e-14	3	3
ENSAPOP00000011544	zf-met	PF12874.7	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000019157	-	4268	XM_022189402	ENSAPOP00000011544	774 (aa)	XP_022045094	UPI000B8F107D

Gene Model

Click here to download ENSAPOG00000014135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000014135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000014135	-	100	78.289	ENSACIG00000009747	-	100	78.289	Amphilophus_citrinellus
ENSAPOG00000014135	-	62	66.154	ENSACIG00000014426	prdm1b	75	66.154	Amphilophus_citrinellus
ENSAPOG00000014135	-	56	58.282	ENSAPEG00000019826	prdm1b	77	64.286	Amphiprion_percula
ENSAPOG00000014135	-	98	75.162	ENSATEG00000014034	-	99	75.162	Anabas_testudineus
ENSAPOG00000014135	-	99	35.580	ENSATEG00000021017	prdm1a	99	46.379	Anabas_testudineus
ENSAPOG00000014135	-	81	37.870	ENSATEG00000006924	prdm1b	96	37.946	Anabas_testudineus
ENSAPOG00000014135	-	99	42.825	ENSCSEG00000009707	prdm1a	99	45.949	Cynoglossus_semilaevis
ENSAPOG00000014135	-	59	38.593	ENSCVAG00000016746	prdm1b	97	38.794	Cyprinodon_variegatus
ENSAPOG00000014135	-	99	43.003	ENSCVAG00000019081	prdm1a	99	46.086	Cyprinodon_variegatus
ENSAPOG00000014135	-	81	37.781	ENSFHEG00000019848	prdm1b	96	37.781	Fundulus_heteroclitus
ENSAPOG00000014135	-	99	68.112	ENSGAFG00000013012	-	99	68.112	Gambusia_affinis
ENSAPOG00000014135	-	94	38.481	ENSGAFG00000016191	prdm1b	77	65.152	Gambusia_affinis
ENSAPOG00000014135	-	52	56.098	ENSGACG00000002716	prdm1b	58	56.098	Gasterosteus_aculeatus
ENSAPOG00000014135	-	74	39.439	ENSHBUG00000001475	prdm1b	90	39.439	Haplochromis_burtoni
ENSAPOG00000014135	-	77	38.149	ENSKMAG00000011218	prdm1b	89	38.149	Kryptolebias_marmoratus
ENSAPOG00000014135	-	99	73.537	ENSKMAG00000016247	-	99	73.537	Kryptolebias_marmoratus
ENSAPOG00000014135	-	75	58.025	ENSLBEG00000020955	prdm1b	75	62.857	Labrus_bergylta
ENSAPOG00000014135	-	63	56.977	ENSLOCG00000004978	prdm1b	63	56.977	Lepisosteus_oculatus
ENSAPOG00000014135	-	80	36.874	ENSMMOG00000013458	prdm1b	96	36.874	Mola_mola
ENSAPOG00000014135	-	98	76.853	ENSMALG00000000462	-	99	76.853	Monopterus_albus
ENSAPOG00000014135	-	81	35.952	ENSMALG00000011410	prdm1b	97	36.267	Monopterus_albus
ENSAPOG00000014135	-	100	77.962	ENSONIG00000014709	-	100	77.962	Oreochromis_niloticus
ENSAPOG00000014135	-	61	53.169	ENSONIG00000013583	prdm1b	66	53.169	Oreochromis_niloticus
ENSAPOG00000014135	-	73	52.098	ENSPKIG00000022335	prdm1b	71	52.098	Paramormyrops_kingsleyae
ENSAPOG00000014135	-	85	41.245	ENSPFOG00000003103	prdm1b	98	41.245	Poecilia_formosa
ENSAPOG00000014135	-	81	36.850	ENSPLAG00000018491	prdm1b	95	36.850	Poecilia_latipinna
ENSAPOG00000014135	-	81	36.898	ENSPMEG00000007869	prdm1b	95	36.898	Poecilia_mexicana
ENSAPOG00000014135	-	64	57.738	ENSPREG00000011327	prdm1b	95	37.004	Poecilia_reticulata
ENSAPOG00000014135	-	94	41.597	ENSPVAG00000011732	PRDM1	99	41.836	Pteropus_vampyrus
ENSAPOG00000014135	-	94	46.204	ENSPNAG00000028442	prdm1a	95	46.204	Pygocentrus_nattereri
ENSAPOG00000014135	-	56	56.299	ENSSFOG00015021896	prdm1b	92	40.948	Scleropages_formosus
ENSAPOG00000014135	-	90	36.364	ENSSMAG00000020467	prdm1b	92	40.080	Scophthalmus_maximus
ENSAPOG00000014135	-	100	74.304	ENSSMAG00000017518	-	100	74.304	Scophthalmus_maximus
ENSAPOG00000014135	-	74	37.977	ENSSDUG00000020610	prdm1b	87	37.977	Seriola_dumerili
ENSAPOG00000014135	-	100	79.975	ENSSDUG00000000524	-	100	79.975	Seriola_dumerili
ENSAPOG00000014135	-	86	40.230	ENSSLDG00000021973	prdm1b	88	40.230	Seriola_lalandi_dorsalis
ENSAPOG00000014135	-	100	80.355	ENSSLDG00000001957	-	100	80.355	Seriola_lalandi_dorsalis
ENSAPOG00000014135	-	100	87.564	ENSSPAG00000009830	-	100	87.564	Stegastes_partitus
ENSAPOG00000014135	-	79	42.836	ENSTNIG00000003926	prdm1a	99	41.940	Tetraodon_nigroviridis
ENSAPOG00000014135	-	94	40.263	ENSXCOG00000018920	prdm1b	98	39.159	Xiphophorus_couchianus
ENSAPOG00000014135	-	94	40.263	ENSXMAG00000016765	prdm1b	92	40.263	Xiphophorus_maculatus