EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSAPOG00000014531 (Gene tree)
Gene ID: 110960252
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 878-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 7498 bases
Position: chrMVNR01000778.1:170931-178428
Accession: 110960252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000011923	zf-C2H2	PF00096.26	1.2e-21	1	3
ENSAPOP00000011923	zf-C2H2	PF00096.26	1.2e-21	2	3
ENSAPOP00000011923	zf-C2H2	PF00096.26	1.2e-21	3	3
ENSAPOP00000028961	zf-C2H2	PF00096.26	1.2e-21	1	3
ENSAPOP00000028961	zf-C2H2	PF00096.26	1.2e-21	2	3
ENSAPOP00000028961	zf-C2H2	PF00096.26	1.2e-21	3	3
ENSAPOP00000011923	zf-met	PF12874.7	2.5e-12	1	1
ENSAPOP00000028961	zf-met	PF12874.7	2.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000019621	-	3656	XM_022207420	ENSAPOP00000028961	759 (aa)	XP_022063112	UPI000B8F55D8
ENSAPOT00000031803	-	3780	-	ENSAPOP00000011923	759 (aa)	-	UPI000B8F55D8

Gene Model

Click here to download ENSAPOG00000014531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000014531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000014531	-	55	31.915	ENSAPOG00000013499	-	67	31.915
ENSAPOG00000014531	-	51	35.922	ENSAPOG00000003666	-	94	32.124
ENSAPOG00000014531	-	52	41.379	ENSAPOG00000020864	-	53	41.379
ENSAPOG00000014531	-	53	33.696	ENSAPOG00000020116	-	72	33.696
ENSAPOG00000014531	-	52	33.333	ENSAPOG00000011470	-	65	32.000
ENSAPOG00000014531	-	54	32.468	ENSAPOG00000005097	znf236	57	32.468
ENSAPOG00000014531	-	52	30.198	ENSAPOG00000008319	-	52	34.058
ENSAPOG00000014531	-	59	35.043	ENSAPOG00000008802	-	99	31.229
ENSAPOG00000014531	-	58	30.357	ENSAPOG00000005259	-	54	30.357