EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000014688 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U2 small nuclear ribonucleoprotein B''-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 562 bases
Position: chrMVNR01013288.1:2950-3511
Accession: 110946801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000012062	RRM_1	PF00076.22	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000031862	-	291	XM_022188298	ENSAPOP00000012062	96 (aa)	XP_022043990	-

Gene Model

Click here to download ENSAPOG00000014688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000014688's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000014688	-	78	33.333	ENSAPOG00000023788	sf3b6	54	33.333
ENSAPOG00000014688	-	100	100.000	ENSAPOG00000015161	snrpb2	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000014688	-	81	70.513	ENSG00000077312	SNRPA	90	70.513	Homo_sapiens
ENSAPOG00000014688	-	81	69.231	ENSCJAG00000045570	-	84	69.231	Callithrix_jacchus
ENSAPOG00000014688	-	79	69.737	ENSCAFG00020024265	-	61	70.667	Canis_lupus_dingo
ENSAPOG00000014688	-	85	67.073	ENSCAFG00020014898	SNRPA	80	70.513	Canis_lupus_dingo
ENSAPOG00000014688	-	81	70.513	ENSCAFG00020017913	-	81	70.513	Canis_lupus_dingo
ENSAPOG00000014688	-	81	82.051	ENSCAFG00020011358	-	89	82.051	Canis_lupus_dingo
ENSAPOG00000014688	-	81	70.513	ENSCATG00000032716	SNRPA	81	70.513	Cercocebus_atys
ENSAPOG00000014688	-	83	70.000	ENSCANG00000038637	SNRPA	80	70.513	Colobus_angolensis_palliatus
ENSAPOG00000014688	-	94	63.158	ENSMFAG00000041710	SNRPA	81	70.513	Macaca_fascicularis
ENSAPOG00000014688	-	91	64.368	ENSMMUG00000022024	SNRPA	82	70.513	Macaca_mulatta
ENSAPOG00000014688	-	81	70.513	ENSMLEG00000039593	SNRPA	81	70.513	Mandrillus_leucophaeus
ENSAPOG00000014688	-	82	86.076	MGP_CAROLIEiJ_G0024372	Snrpb2	55	86.076	Mus_caroli
ENSAPOG00000014688	-	82	86.076	ENSMUSG00000008333	Snrpb2	55	86.076	Mus_musculus
ENSAPOG00000014688	-	82	86.076	MGP_PahariEiJ_G0025817	Snrpb2	55	86.076	Mus_pahari
ENSAPOG00000014688	-	82	86.076	MGP_SPRETEiJ_G0025291	Snrpb2	55	86.076	Mus_spretus
ENSAPOG00000014688	-	82	68.354	ENSODEG00000000626	-	79	69.231	Octodon_degus
ENSAPOG00000014688	-	81	70.513	ENSPANG00000023874	SNRPA	81	70.513	Papio_anubis
ENSAPOG00000014688	-	97	62.366	ENSPCOG00000025196	SNRPA	78	70.513	Propithecus_coquereli
ENSAPOG00000014688	-	83	70.000	ENSRBIG00000008335	SNRPA	80	70.513	Rhinopithecus_bieti
ENSAPOG00000014688	-	83	70.000	ENSRROG00000042727	SNRPA	80	70.513	Rhinopithecus_roxellana
ENSAPOG00000014688	-	76	34.247	YIR009W	MSL1	65	34.247	Saccharomyces_cerevisiae
ENSAPOG00000014688	-	81	70.513	ENSSBOG00000034722	SNRPA	68	61.702	Saimiri_boliviensis_boliviensis
ENSAPOG00000014688	-	85	69.512	ENSUAMG00000003002	-	85	70.513	Ursus_americanus
ENSAPOG00000014688	-	79	71.053	ENSUMAG00000000069	-	58	71.053	Ursus_maritimus
ENSAPOG00000014688	-	85	67.073	ENSVVUG00000005647	SNRPA	80	70.513	Vulpes_vulpes
ENSAPOG00000014688	-	81	69.231	ENSVVUG00000014183	-	67	72.000	Vulpes_vulpes
ENSAPOG00000014688	-	80	80.519	ENSXCOG00000012134	-	80	80.263	Xiphophorus_couchianus