EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000015105 (Gene tree)
Gene ID
110966189
Gene Symbol
pabpc1a
Alias
-
Full Name
polyadenylate-binding protein 1-like
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Minus strand
Length
7256 bases
Position
chrMVNR01001562.1:22370-29625
Accession
110966189
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000029276PABPPF00658.187.1e-3211
ENSAPOP00000029257PABPPF00658.187.7e-2611
ENSAPOP00000029276RRM_5PF13893.65e-0812
ENSAPOP00000029276RRM_5PF13893.65e-0822
ENSAPOP00000029276RRM_1PF00076.229.9e-9314
ENSAPOP00000029276RRM_1PF00076.229.9e-9324
ENSAPOP00000029276RRM_1PF00076.229.9e-9334
ENSAPOP00000029276RRM_1PF00076.229.9e-9344
ENSAPOP00000029257RRM_1PF00076.221.4e-7314
ENSAPOP00000029257RRM_1PF00076.221.4e-7324
ENSAPOP00000029257RRM_1PF00076.221.4e-7334
ENSAPOP00000029257RRM_1PF00076.221.4e-7344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000032027-4223XM_022215477ENSAPOP00000029276635 (aa)XP_022071169UPI000B8F18FC
ENSAPOT00000020229-1740-ENSAPOP00000029257579 (aa)--
Gene Model
Click here to download ENSAPOG00000015105's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000015105's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000015105pabpc1a5536.145ENSAPOG00000006015celf3a6036.986
ENSAPOG00000015105pabpc1a10090.439ENSAPOG00000017776pabpc1b10090.439
ENSAPOG00000015105pabpc1a9866.932ENSAPOG00000010842pabpc1l9966.932
ENSAPOG00000015105pabpc1a5130.070ENSAPOG00000015534tial16930.169
ENSAPOG00000015105pabpc1a5534.884ENSAPOG00000017441-5835.714
ENSAPOG00000015105pabpc1a9876.592ENSAPOG00000001161pabpc410076.131
ENSAPOG00000015105pabpc1a6041.026ENSAPOG00000000306rbm39b7041.026
ENSAPOG00000015105pabpc1a6031.788ENSAPOG00000022121ELAVL28531.788
ENSAPOG00000015105pabpc1a7438.554ENSAPOG00000019202si:dkey-205h23.28238.554
ENSAPOG00000015105pabpc1a6037.333ENSAPOG00000010507rbm197537.333
ENSAPOG00000015105pabpc1a6139.759ENSAPOG00000004445celf5a6139.759
ENSAPOG00000015105pabpc1a5034.266ENSAPOG00000007089tia1l5633.784
ENSAPOG00000015105pabpc1a5936.145ENSAPOG00000020329elavl48436.145
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000015105pabpc1a5880.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSAPOG00000015105pabpc1a5880.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSAPOG00000015105pabpc1a5880.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSAPOG00000015105pabpc1a10098.583ENSACIG00000004685pabpc1a10098.583Amphilophus_citrinellus
ENSAPOG00000015105pabpc1a10086.228ENSACIG00000018366pabpc1b10086.228Amphilophus_citrinellus
ENSAPOG00000015105pabpc1a10090.282ENSAOCG00000019839pabpc1b10090.282Amphiprion_ocellaris
ENSAPOG00000015105pabpc1a10099.213ENSAOCG00000011656pabpc1a10099.213Amphiprion_ocellaris
ENSAPOG00000015105pabpc1a10099.213ENSAPEG00000006963pabpc1a10099.213Amphiprion_percula
ENSAPOG00000015105pabpc1a10090.282ENSAPEG00000010435pabpc1b10090.282Amphiprion_percula
ENSAPOG00000015105pabpc1a10098.583ENSATEG00000024852pabpc1a10098.583Anabas_testudineus
ENSAPOG00000015105pabpc1a10089.671ENSATEG00000012917pabpc1b10090.141Anabas_testudineus
ENSAPOG00000015105pabpc1a5880.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSAPOG00000015105pabpc1a5880.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSAPOG00000015105pabpc1a10098.110ENSACLG00000009399pabpc1a10098.110Astatotilapia_calliptera
ENSAPOG00000015105pabpc1a10089.185ENSACLG00000014335pabpc1b10089.342Astatotilapia_calliptera
ENSAPOG00000015105pabpc1a10090.282ENSAMXG00000008599pabpc1b10090.282Astyanax_mexicanus
ENSAPOG00000015105pabpc1a5977.033ENSBTAG00000052491-9877.033Bos_taurus
ENSAPOG00000015105pabpc1a5979.024ENSBTAG00000050902-9879.024Bos_taurus
ENSAPOG00000015105pabpc1a5880.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSAPOG00000015105pabpc1a5979.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSAPOG00000015105pabpc1a5880.102ENSCHIG00000006283-9880.102Capra_hircus
ENSAPOG00000015105pabpc1a5880.102ENSCHIG00000011138-9880.102Capra_hircus
ENSAPOG00000015105pabpc1a5880.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSAPOG00000015105pabpc1a5880.102ENSCPOG00000009525-9880.102Cavia_porcellus
ENSAPOG00000015105pabpc1a5880.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSAPOG00000015105pabpc1a5880.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSAPOG00000015105pabpc1a5880.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSAPOG00000015105pabpc1a5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSAPOG00000015105pabpc1a5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSAPOG00000015105pabpc1a5880.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSAPOG00000015105pabpc1a5780.110ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSAPOG00000015105pabpc1a9997.785ENSCSEG00000013324pabpc1a10097.785Cynoglossus_semilaevis
ENSAPOG00000015105pabpc1a10088.871ENSCSEG00000015241-10088.871Cynoglossus_semilaevis
ENSAPOG00000015105pabpc1a10097.953ENSCVAG00000021872pabpc1a10097.953Cyprinodon_variegatus
ENSAPOG00000015105pabpc1a10088.263ENSCVAG00000005489pabpc1b10088.263Cyprinodon_variegatus
ENSAPOG00000015105pabpc1a10091.536ENSDARG00000017219pabpc1a10091.536Danio_rerio
ENSAPOG00000015105pabpc1a10089.498ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSAPOG00000015105pabpc1a5880.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSAPOG00000015105pabpc1a5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSAPOG00000015105pabpc1a5978.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSAPOG00000015105pabpc1a5978.641ENSECAG00000002620-9878.641Equus_caballus
ENSAPOG00000015105pabpc1a5976.020ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSAPOG00000015105pabpc1a5958.621ENSELUG00000005389-9758.621Esox_lucius
ENSAPOG00000015105pabpc1a10089.219ENSELUG00000015062-10089.219Esox_lucius
ENSAPOG00000015105pabpc1a9994.182ENSELUG00000003614pabpc1a10094.182Esox_lucius
ENSAPOG00000015105pabpc1a5880.102ENSFCAG00000039701-9880.102Felis_catus
ENSAPOG00000015105pabpc1a5880.102ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSAPOG00000015105pabpc1a10097.953ENSFHEG00000018979pabpc1a10097.953Fundulus_heteroclitus
ENSAPOG00000015105pabpc1a10089.185ENSFHEG00000008186pabpc1b10089.655Fundulus_heteroclitus
ENSAPOG00000015105pabpc1a10080.930ENSGMOG00000002448-10080.930Gadus_morhua
ENSAPOG00000015105pabpc1a9993.663ENSGMOG00000013448pabpc1a9993.972Gadus_morhua
ENSAPOG00000015105pabpc1a10097.323ENSGAFG00000019750pabpc1a10097.323Gambusia_affinis
ENSAPOG00000015105pabpc1a10090.282ENSGAFG00000010193pabpc1b10090.596Gambusia_affinis
ENSAPOG00000015105pabpc1a10097.795ENSGACG00000003572pabpc1a10097.795Gasterosteus_aculeatus
ENSAPOG00000015105pabpc1a10088.527ENSGACG00000003771pabpc1b10088.527Gasterosteus_aculeatus
ENSAPOG00000015105pabpc1a5880.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSAPOG00000015105pabpc1a5880.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSAPOG00000015105pabpc1a10098.110ENSHBUG00000020487pabpc1a10098.110Haplochromis_burtoni
ENSAPOG00000015105pabpc1a10089.185ENSHBUG00000002075pabpc1b10089.342Haplochromis_burtoni
ENSAPOG00000015105pabpc1a5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSAPOG00000015105pabpc1a5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSAPOG00000015105pabpc1a5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSAPOG00000015105pabpc1a9875.388ENSHCOG00000003175pabpc1b9969.440Hippocampus_comes
ENSAPOG00000015105pabpc1a10098.740ENSHCOG00000013502pabpc1a10098.740Hippocampus_comes
ENSAPOG00000015105pabpc1a10084.458ENSIPUG00000010791-10084.458Ictalurus_punctatus
ENSAPOG00000015105pabpc1a7656.716ENSIPUG00000018724-7956.716Ictalurus_punctatus
ENSAPOG00000015105pabpc1a10090.236ENSIPUG00000008848pabpc1a10090.581Ictalurus_punctatus
ENSAPOG00000015105pabpc1a7555.301ENSIPUG00000021244-6555.301Ictalurus_punctatus
ENSAPOG00000015105pabpc1a5879.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSAPOG00000015105pabpc1a5879.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSAPOG00000015105pabpc1a5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSAPOG00000015105pabpc1a10088.994ENSKMAG00000008049pabpc1b10089.325Kryptolebias_marmoratus
ENSAPOG00000015105pabpc1a10098.268ENSKMAG00000000605pabpc1a10098.268Kryptolebias_marmoratus
ENSAPOG00000015105pabpc1a10089.185ENSLBEG00000026845pabpc1b10089.185Labrus_bergylta
ENSAPOG00000015105pabpc1a10097.795ENSLBEG00000024002-10097.795Labrus_bergylta
ENSAPOG00000015105pabpc1a5878.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSAPOG00000015105pabpc1a5879.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSAPOG00000015105pabpc1a5880.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSAPOG00000015105pabpc1a5880.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSAPOG00000015105pabpc1a5880.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSAPOG00000015105pabpc1a5880.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSAPOG00000015105pabpc1a5880.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSAPOG00000015105pabpc1a10089.812ENSMAMG00000014610pabpc1b10089.969Mastacembelus_armatus
ENSAPOG00000015105pabpc1a10098.268ENSMAMG00000004502-10098.268Mastacembelus_armatus
ENSAPOG00000015105pabpc1a10089.185ENSMZEG00005026745pabpc1b10089.342Maylandia_zebra
ENSAPOG00000015105pabpc1a10098.110ENSMZEG00005025416pabpc1a10098.110Maylandia_zebra
ENSAPOG00000015105pabpc1a5880.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSAPOG00000015105pabpc1a10084.772ENSMMOG00000018009pabpc1b10084.772Mola_mola
ENSAPOG00000015105pabpc1a10095.781ENSMMOG00000018044pabpc1a10095.781Mola_mola
ENSAPOG00000015105pabpc1a9966.041ENSMODG00000015024-9966.041Monodelphis_domestica
ENSAPOG00000015105pabpc1a9873.163ENSMODG00000013156-9873.323Monodelphis_domestica
ENSAPOG00000015105pabpc1a10098.110ENSMALG00000013020-10098.110Monopterus_albus
ENSAPOG00000015105pabpc1a10085.086ENSMALG00000006066pabpc1b10085.243Monopterus_albus
ENSAPOG00000015105pabpc1a5881.967ENSNGAG00000012688-9878.571Nannospalax_galili
ENSAPOG00000015105pabpc1a10098.268ENSNBRG00000003068-10098.268Neolamprologus_brichardi
ENSAPOG00000015105pabpc1a10089.185ENSNBRG00000013737pabpc1b10089.342Neolamprologus_brichardi
ENSAPOG00000015105pabpc1a5880.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSAPOG00000015105pabpc1a5879.592ENSODEG00000018540-9879.592Octodon_degus
ENSAPOG00000015105pabpc1a10097.638ENSONIG00000006871-10097.638Oreochromis_niloticus
ENSAPOG00000015105pabpc1a10089.342ENSONIG00000002717pabpc1b10089.498Oreochromis_niloticus
ENSAPOG00000015105pabpc1a5880.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSAPOG00000015105pabpc1a10084.929ENSORLG00000003008-10084.929Oryzias_latipes
ENSAPOG00000015105pabpc1a9999.048ENSORLG00000002691pabpc1a10099.048Oryzias_latipes
ENSAPOG00000015105pabpc1a10084.772ENSORLG00020022259-10084.772Oryzias_latipes_hni
ENSAPOG00000015105pabpc1a10097.323ENSORLG00020022398pabpc1a10097.323Oryzias_latipes_hni
ENSAPOG00000015105pabpc1a10085.243ENSORLG00015010932-10085.243Oryzias_latipes_hsok
ENSAPOG00000015105pabpc1a10097.165ENSORLG00015013633pabpc110097.165Oryzias_latipes_hsok
ENSAPOG00000015105pabpc1a10097.953ENSOMEG00000020219pabpc1a10097.953Oryzias_melastigma
ENSAPOG00000015105pabpc1a9481.465ENSOMEG00000013627pabpc1b10081.465Oryzias_melastigma
ENSAPOG00000015105pabpc1a5880.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSAPOG00000015105pabpc1a5880.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSAPOG00000015105pabpc1a5880.102ENSOARG00000005943-9880.102Ovis_aries
ENSAPOG00000015105pabpc1a5880.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSAPOG00000015105pabpc1a5880.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSAPOG00000015105pabpc1a5880.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSAPOG00000015105pabpc1a5880.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSAPOG00000015105pabpc1a5880.102ENSPANG00000011549-9880.102Papio_anubis
ENSAPOG00000015105pabpc1a10090.282ENSPKIG00000005676pabpc1b10090.282Paramormyrops_kingsleyae
ENSAPOG00000015105pabpc1a7092.152ENSPMGG00000023134-9792.152Periophthalmus_magnuspinnatus
ENSAPOG00000015105pabpc1a7098.202ENSPMGG00000022487pabpc1a9298.202Periophthalmus_magnuspinnatus
ENSAPOG00000015105pabpc1a9972.266ENSPCIG00000016995-5572.266Phascolarctos_cinereus
ENSAPOG00000015105pabpc1a10089.812ENSPFOG00000005917pabpc1b10090.125Poecilia_formosa
ENSAPOG00000015105pabpc1a10096.600ENSPFOG00000010815pabpc1a10096.600Poecilia_formosa
ENSAPOG00000015105pabpc1a10098.583ENSPLAG00000004114pabpc1a10098.583Poecilia_latipinna
ENSAPOG00000015105pabpc1a10090.125ENSPLAG00000001388pabpc1b10090.439Poecilia_latipinna
ENSAPOG00000015105pabpc1a10089.812ENSPMEG00000014399pabpc1b10090.125Poecilia_mexicana
ENSAPOG00000015105pabpc1a10098.583ENSPMEG00000001334pabpc1a10098.583Poecilia_mexicana
ENSAPOG00000015105pabpc1a10090.125ENSPREG00000010911pabpc1b10090.439Poecilia_reticulata
ENSAPOG00000015105pabpc1a10095.476ENSPREG00000019595pabpc1a10096.101Poecilia_reticulata
ENSAPOG00000015105pabpc1a5880.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSAPOG00000015105pabpc1a5980.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSAPOG00000015105pabpc1a5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSAPOG00000015105pabpc1a5980.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSAPOG00000015105pabpc1a10098.110ENSPNYG00000005192pabpc1a10098.110Pundamilia_nyererei
ENSAPOG00000015105pabpc1a10089.185ENSPNYG00000012578pabpc1b10089.342Pundamilia_nyererei
ENSAPOG00000015105pabpc1a10091.052ENSPNAG00000028408pabpc1a10091.052Pygocentrus_nattereri
ENSAPOG00000015105pabpc1a10089.812ENSPNAG00000024626pabpc1b10089.812Pygocentrus_nattereri
ENSAPOG00000015105pabpc1a5880.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSAPOG00000015105pabpc1a9989.461ENSRBIG00000028738-9589.461Rhinopithecus_bieti
ENSAPOG00000015105pabpc1a5880.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSAPOG00000015105pabpc1a9863.942ENSSHAG00000000511-10063.942Sarcophilus_harrisii
ENSAPOG00000015105pabpc1a10090.424ENSSFOG00015002752-10090.581Scleropages_formosus
ENSAPOG00000015105pabpc1a10089.953ENSSFOG00015006662pabpc1a10090.267Scleropages_formosus
ENSAPOG00000015105pabpc1a6978.613ENSSFOG00015019668-8878.613Scleropages_formosus
ENSAPOG00000015105pabpc1a10088.871ENSSMAG00000006869pabpc1b10088.871Scophthalmus_maximus
ENSAPOG00000015105pabpc1a10098.268ENSSMAG00000010803pabpc1a10098.268Scophthalmus_maximus
ENSAPOG00000015105pabpc1a10088.558ENSSDUG00000011965pabpc1b10088.715Seriola_dumerili
ENSAPOG00000015105pabpc1a10098.740ENSSDUG00000006675pabpc1a10098.740Seriola_dumerili
ENSAPOG00000015105pabpc1a10098.740ENSSLDG00000011661pabpc1a10098.740Seriola_lalandi_dorsalis
ENSAPOG00000015105pabpc1a10090.202ENSSLDG00000014156pabpc1b10090.358Seriola_lalandi_dorsalis
ENSAPOG00000015105pabpc1a10090.752ENSSPAG00000019265pabpc1b10090.909Stegastes_partitus
ENSAPOG00000015105pabpc1a10099.528ENSSPAG00000014453-10099.528Stegastes_partitus
ENSAPOG00000015105pabpc1a5880.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSAPOG00000015105pabpc1a5880.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSAPOG00000015105pabpc1a10086.385ENSTRUG00000003767-10086.854Takifugu_rubripes
ENSAPOG00000015105pabpc1a10094.969ENSTRUG00000011577-10095.440Takifugu_rubripes
ENSAPOG00000015105pabpc1a10086.916ENSTNIG00000009153pabpc1b10086.916Tetraodon_nigroviridis
ENSAPOG00000015105pabpc1a10092.248ENSTNIG00000013307pabpc1a10092.713Tetraodon_nigroviridis
ENSAPOG00000015105pabpc1a5880.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSAPOG00000015105pabpc1a5880.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSAPOG00000015105pabpc1a9754.531ENSUMAG00000023926-8970.166Ursus_maritimus
ENSAPOG00000015105pabpc1a5880.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSAPOG00000015105pabpc1a5879.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSAPOG00000015105pabpc1a9745.221ENSXETG00000015439-9745.161Xenopus_tropicalis
ENSAPOG00000015105pabpc1a10092.126ENSXCOG00000017066pabpc1a10092.126Xiphophorus_couchianus
ENSAPOG00000015105pabpc1a10086.050ENSXCOG00000019901pabpc1b10086.050Xiphophorus_couchianus
ENSAPOG00000015105pabpc1a10097.953ENSXMAG00000002555pabpc1a10097.953Xiphophorus_maculatus
ENSAPOG00000015105pabpc1a10090.282ENSXMAG00000003753pabpc1b10090.596Xiphophorus_maculatus

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